CV884518

Overview
NameCV884518
Unique NameCV884518
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_CITLA (Cysteine synthase OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 3.024e-98
Identity = 180/218 (82.57%), Postives = 194/218 (88.99%), Query Frame = 1
Query:   34 MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            MA   S IAKDVTELIGNTPLVYLN +V+GCVAR+AAKLEMMEPCSSVKDRIGYSMISDAE KGLITPGESVLIEPTSGNTGIGLAF+AAAK YRLII MPASMSLERR ILRAFGAELVLTDPA+GMKGAVQKAEEI AKTPN+Y+LQQFENPANPKIHYETTGPE+W+GSGG+IDALVS            K+LKE+NPNIKLYG+EP ES +LSG
Sbjct:    1 MADAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDAENKGLITPGESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSLERRTILRAFGAELVLTDPARGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGSGGKIDALVSGIGTGGTVTGAGKYLKEQNPNIKLYGVEPVESAILSG 218          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 9.106e-95
Identity = 170/218 (77.98%), Postives = 190/218 (87.16%), Query Frame = 1
Query:   34 MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            MA E   IAKDVTELIGNTPLVYLNN+V+GCVAR+AAKLE MEPCSSVKDRIGYSMI+DAE KGLI PGESVLIEPTSGNTG+GLAFMAAAK Y+LIITMP+SMSLERRIILR F +ELVLTDPAKGMKGA+ KAEEI AKTPN+Y+LQQFENPANPKIHYETTGPE+WKGS G++DAL S            K+L+E+NPN+KLYG+EP ES +LSG
Sbjct:    1 MAGEKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELVLTDPAKGMKGAISKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGSNGKVDALASGIGTGGTITGSGKYLREQNPNVKLYGVEPVESAILSG 218          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 5.903e-94
Identity = 169/214 (78.97%), Postives = 185/214 (86.45%), Query Frame = 1
Query:   46 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            +S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KGLI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS+ERRIIL AFG ELVLTDPAKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+ G+ID  VS            K+LKE+NPN+KLYG+EP ES +LSG
Sbjct:    2 ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSVERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTDGKIDGFVSGIGTGGTITGAGKYLKEQNPNVKLYGVEPIESAILSG 215          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2)

HSP 1 Score: 342.813 bits (878), Expect = 1.007e-93
Identity = 169/214 (78.97%), Postives = 184/214 (85.98%), Query Frame = 1
Query:   46 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            +S IAKDVTELIGNTPLVYLNN+  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KGLI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS ERRIIL AFG ELVLTDPAKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+GG+ID  VS            K+LKE+N N+KLYG+EP ES +LSG
Sbjct:    2 ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSG 215          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 3.239e-92
Identity = 165/211 (78.20%), Postives = 182/211 (86.26%), Query Frame = 1
Query:   55 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            IA DVTELIGNTPLVYLN++  GCV R+AAKLEMMEPCSSVKDRIG+SMISDAE KGLI PGESVLIEPTSGNTG+GLAF AAAK Y+LIITMPASMS+ERRIIL AFG ELVLTDPAKGMKGA+ KAEEILAKTPN YMLQQFENPANPKIHYETTGPE+WKG+ G+ID  +S            K+LKE+NPN+KLYG+EP ES +LSG
Sbjct:    7 IANDVTELIGNTPLVYLNSVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSIERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTEGKIDGFISGIGTGGTITGAGKYLKEQNPNVKLYGVEPVESAILSG 217          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_WHEAT (Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 7.216e-92
Identity = 164/214 (76.64%), Postives = 186/214 (86.92%), Query Frame = 1
Query:   46 SSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            S  IAKDVTELIGNTPLVYLN + +GCV R+AAKLE MEPCSSVKDRIGYSMI+DAE KG I PG+SVLIEPTSGNTGIGLAFMAAAK YRL++TMPASMS+ERRIIL+AFGAEL+LTDP  GMKGAVQKAEE+ AKTPN+Y+LQQFEN ANPKIHYETTGPE+WKG+GG+ID LVS            K+L+E+NPNIKLYG+EPTES +L+G
Sbjct:    6 SPAIAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIVPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTPNSYILQQFENAANPKIHYETTGPEIWKGTGGKIDGLVSGIGTGGTITGTGKYLQEQNPNIKLYGVEPTESAILNG 219          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_SPIOL (Cysteine synthase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.231e-91
Identity = 167/218 (76.61%), Postives = 187/218 (85.78%), Query Frame = 1
Query:   34 MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            M  E + IAKDVTELIG TPLVYLN + +GCVAR+AAKLE MEPCSSVKDRIG+SMI+DAE  GLITPGESVLIEPTSGNTGIGLAF+AAAK Y+LIITMPASMSLERR ILRAFGAEL+LTDPAKGMKGAVQKAEEI  KTPN+Y+LQQFENPANPK+HYETTGPE+WKG+GG+ID  VS            K+LKE+NP++KL G+EP ES VLSG
Sbjct:    1 MVEEKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAEKSGLITPGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELILTDPAKGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGTGGKIDIFVSGIGTGGTITGAGKYLKEQNPDVKLIGLEPVESAVLSG 218          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK1_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2)

HSP 1 Score: 333.569 bits (854), Expect = 6.108e-91
Identity = 161/211 (76.30%), Postives = 186/211 (88.15%), Query Frame = 1
Query:   55 IAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            IAKDVTELIGNTPLVYLN + +GCV R+AAKLE MEPCSSVKDRIGYSMI+DAE KGLITPG+SVLIEPTSGNTGIGLAFMAAAK YRL++TMPASMS+ERRIIL+AFGAEL+LTDP  GMKGAVQKAEE+ AKT N+++LQQFENPANPKIHYETTGPE+WKG+GG++D LVS            ++L+E+NP+IK+YG+EP ES VLSG
Sbjct:    5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSGIGTGGTITGAGRYLREQNPDIKIYGVEPVESAVLSG 215          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK2_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.777e-90
Identity = 162/218 (74.31%), Postives = 187/218 (85.78%), Query Frame = 1
Query:   34 MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            MA    +IA DVT LIGNTPLVYLN +V+GC A+IAAKLE+MEPCSSVKDRIGYSMI+DAE KGLITPG+SVLIEPTSGNTGIGLAFMAAAK Y+LI+TMPASMS+ERRIIL+AFGAELVLTDP  GMKGA+QKA+E+ AK PN+Y+LQQFENPANPKIHYETTGPE+WK + G++D LVS            K+LKE+NP IK+YG+EPTES +LSG
Sbjct:    1 MAESGQSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLTDPLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKATAGKVDILVSGIGTGGTVTGTGKYLKEQNPEIKIYGVEPTESAILSG 218          
BLAST of CV884518 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 1.152e-89
Identity = 163/218 (74.77%), Postives = 184/218 (84.40%), Query Frame = 1
Query:   34 MAVESSNIAKDVTELIGNTPLVYLNNIVNGCVARIAAKLEMMEPCSSVKDRIGYSMISDAEAKGLITPGESVLIEPTSGNTGIGLAFMAAAKQYRLIITMPASMSLERRIILRAFGAELVLTDPAKGMKGAVQKAEEILAKTPNAYMLQQFENPANPKIHYETTGPELWKGSGGRIDALVSXXXXXXXXXXXXKFLKEKNPNIKLYGIEPTESPVLSG 687
            M   S +IAKDVTELIGNTPLVYLN + +GCV R  AKLE MEPCSSVKDRIGYSMI+DAE KGLITPG SVLIEPTSGNTGIGLAFMAAAK Y+L +TMPASMS+ERRIIL+AFGAELVLTDP  GMKGAV+KAEEI AKTPN+Y+LQQFENPANPKIHYETTGPE+WK + G+ID LVS            ++L+E+NPN+KLYG+EP ES VL+G
Sbjct:    1 MGEASPSIAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELVLTDPLLGMKGAVKKAEEIQAKTPNSYILQQFENPANPKIHYETTGPEIWKATAGKIDGLVSGIGTGGTITGTGRYLREQNPNVKLYGVEPVESAVLNG 218          
The following BLAST results are available for this feature:
BLAST of CV884518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK_CITLA3.024e-9882.57Cysteine synthase OS=Citrullus lanatus PE=2 SV=1[more]
CYSK_SOLTU9.106e-9577.98Cysteine synthase OS=Solanum tuberosum PE=2 SV=1[more]
CYSK1_BRAJU5.903e-9478.97Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK1_ARATH1.007e-9378.97Cysteine synthase OS=Arabidopsis thaliana GN=OASA1... [more]
CYSK2_BRAJU3.239e-9278.20Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK_WHEAT7.216e-9276.64Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=... [more]
CYSK_SPIOL1.231e-9176.61Cysteine synthase OS=Spinacia oleracea PE=1 SV=1[more]
CYSK1_ORYSJ6.108e-9176.30Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSK2_ORYSJ1.777e-9074.31Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSK_MAIZE1.152e-8974.77Cysteine synthase OS=Zea mays PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008A02_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T3_A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884518 ID=CV884518; Name=CV884518; organism=Citrus sinensis; type=EST; length=689bp
CCACCTTCTACACAAGTCAAGTAATCATAAAACATGGCGGTTGAGAGTAG
CAACATTGCAAAAGATGTTACAGAATTAATTGGCAATACACCATTGGTGT
ATCTCAACAATATTGTCAATGGGTGTGTTGCCCGCATTGCTGCTAAGCTA
GAGATGATGGAACCGTGCTCTAGTGTCAAGGACAGGATTGGTTATAGCAT
GATTTCTGATGCGGAGGCGAAGGGTCTAATAACACCAGGGGAGAGTGTAC
TCATTGAACCTACAAGTGGAAATACTGGGATTGGTTTGGCGTTCATGGCG
GCAGCCAAGCAATACAGGCTTATCATTACAATGCCAGCTTCAATGAGTCT
TGAAAGAAGAATCATTCTTCGAGCATTTGGAGCTGAATTAGTTCTCACCG
ATCCTGCTAAGGGGATGAAAGGGGCTGTTCAGAAGGCAGAGGAGATTCTG
GCTAAAACCCCCAATGCTTACATGCTGCAGCAATTTGAAAACCCTGCCAA
TCCAAAGATCCATTATGAAACTACTGGACCAGAGTTATGGAAAGGGTCAG
GAGGGAGAATCGATGCCCTTGTTTCCGGAATTGGTACTGGTGGCACAATA
ACAGGTGCAGGAAAATTTCTCAAAGAGAAGAACCCCAACATAAAGCTCTA
TGGTATAGAGCCAACTGAAAGTCCTGTTCTATCTGGAGG
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