CV884514

Overview
NameCV884514
Unique NameCV884514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884514 vs. ExPASy Swiss-Prot
Match: HGNAT_HUMAN (Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens GN=HGSNAT PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.303e-19
Identity = 71/234 (30.34%), Postives = 113/234 (48.29%), Query Frame = 2
Query:   83 RLASLDIFRGLAVALMILVDHAGGDWPEISHAPWNGCNLADFVMPFFLFIVGVAIALALKRIPDRADA----VKKVIFRTLKLLFWGILLQGGFSHAPDELTYGVDVRMIRLCGVLQRIALSYLLVSLVE-IFTKDVQDKDQSVGQFSIFR--LYCW-HWLMXXXXXXXXXXXXXXXXXPDWQFTIINKDS-ADYGKVFNVTCGVRGKLNPPCNAVGYIDRKVLGINHMYHRPA 757
            RL S+D FRG+A+ LM+ V++ GG +    HA WNG  +AD V P+F+FI+G +I L++  I  R  +    + K+ +R+  L+  GI++       P+     +    +R+ GVLQR+ ++Y +V+++E +F K V +   S       R     W  WL+                 P      +      D+GK  N T G          A GYIDR +LG +H+Y  P+
Sbjct:  267 RLRSVDTFRGIALILMVFVNYGGGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSILQRGCSKFRLLGKIAWRSFLLICIGIIIVN-----PNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLELLFAKPVPEHCASERSCLSLRDITSSWPQWLLILVLEGLWLGLTFLLPVPGCPTGYLGPGGIGDFGKYPNCTGG----------AAGYIDRLLLGDDHLYQHPS 485          
BLAST of CV884514 vs. ExPASy Swiss-Prot
Match: HGNAT_MOUSE (Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus GN=Hgsnat PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.358e-19
Identity = 73/246 (29.67%), Postives = 113/246 (45.93%), Query Frame = 2
Query:   53 QQEKSHLKTQRLASLDIFRGLAVALMILVDHAGGDWPEISHAPWNGCNLADFVMPFFLFIVGVAIALALKRIPDRA----DAVKKVIFRTLKLLFWGILLQGGFSHAPDELTYGVDVRMIRLCGVLQRIALSYLLVSLVE-IFTKDVQDKDQSVGQFSIFRL----YCW-HWLMXXXXXXXXXXXXXXXXXPDWQFTIINKDS-ADYGKVFNVTCGVRGKLNPPCNAVGYIDRKVLGINHMYHRPA 757
            Q E       RL  +D FRGLA+ LM+ V++ GG +    H+ WNG  +AD V P+F+FI+G +I L++  I  R       + K+++R+  L+  G+++       P+     +    +R+ GVLQR+ ++Y +V+++E  F K V   D    + S F L      W  WL                  P      +      D GK  + T G          A GYIDR +LG NH+Y  P+
Sbjct:  250 QPETRRSSANRLRCVDTFRGLALVLMVFVNYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLSMTSILQRGCSKFKLLGKIVWRSFLLICIGVIIVN-----PNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLEFFFWKPV--PDSCTLESSCFSLRDITSSWPQWLTILTLESIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPHCTGG----------AAGYIDRLLLGDNHLYQHPS 478          
The following BLAST results are available for this feature:
BLAST of CV884514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HGNAT_HUMAN3.303e-1930.34Heparan-alpha-glucosaminide N-acetyltransferase OS... [more]
HGNAT_MOUSE7.358e-1929.67Heparan-alpha-glucosaminide N-acetyltransferase OS... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003H12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884514 ID=CV884514; Name=CV884514; organism=Citrus sinensis; type=EST; length=893bp
CGAAACAACGCATCACCACCCTCTCATCATATCGGAACCCGATGTTTCGG
ACCAACAAGAGAAGTCTCACCTCAAAACTCAGCGTCTCGCTTCACTAGAC
ATCTTCAGAGGCCTTGCTGTGGCGTTGATGATTTTGGTTGATCATGCTGG
GGGAGACTGGCCTGAGATTAGTCATGCTCCATGGAACGGCTGCAACTTGG
CTGATTTTGTTATGCCTTTCTTTTTGTTCATTGTGGGCGTGGCCATTGCA
CTTGCTCTCAAGAGAATACCAGACCGGGCTGACGCTGTTAAGAAGGTGAT
TTTTAGAACTTTGAAACTTCTCTTTTGGGGTATCCTGTTACAAGGTGGCT
TCTCTCATGCTCCTGACGAACTAACATATGGCGTAGATGTAAGAATGATA
AGGTTGTGTGGTGTTCTCCAGAGGATAGCATTGTCATATTTGTTAGTGTC
TCTGGTGGAAATCTTTACAAAAGATGTGCAAGACAAGGATCAATCCGTAG
GCCAGTTCTCTATTTTCAGGTTATATTGTTGGCATTGGTTGATGGCTGCA
TGTGTACTCGTAGTTTACTTGGCACTACTTTATGGTACATATGTTCCTGA
CTGGCAATTTACTATTATTAACAAGGATAGTGCAGATTATGGGAAGGTCT
TCAATGTCACTTGCGGAGTGAGAGGAAAGCTCAATCCTCCATGTAATGCA
GTGGGGTATATCGACAGAAAAGTGTTAGGAATCAATCATATGTATCATCG
TCCGGCATGGAGGAGATCTAAAGCTTGCACTCAAGATTCCCCATTTGAGG
GGCCTCTGCGAAAAGATGCTCCATCTTGGTGTCATGCACCTTTCGAACCC
GAAGGACTCCTAAGCTCAGTATCTTCCATCCTCTCTACCATTA
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