EY665287

Overview
NameEY665287
Unique NameEY665287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5133 contig Csv1_Contig5133:452..1587. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: GAPN_PEA (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Pisum sativum GN=GAPN PE=1 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.924e-81
Identity = 148/163 (90.80%), Postives = 155/163 (95.09%), Query Frame = 3
Query:   12 KGXFLVSHIFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            +G FLVS  FPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALIAGNS+VLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP VNCISFTGGDTGI+ISKK+GMIPL MELGGK+AC VLEDADLDLVAANIIKG  SYSG+
Sbjct:  134 EGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKSGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQ 296          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: GAPN_ARATH (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Arabidopsis thaliana GN=ALDH11A3 PE=1 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 1.247e-80
Identity = 146/163 (89.57%), Postives = 155/163 (95.09%), Query Frame = 3
Query:   12 KGXFLVSHIFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            +G FL+S  FPGN+RTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAV+ LHMVHCFHLAGFPKGLISC+TGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPL MELGGK+AC VL+DADLDLVA+NIIKG  SYSG+
Sbjct:  134 EGKFLLSDSFPGNDRTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVSCLHMVHCFHLAGFPKGLISCITGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLQMELGGKDACIVLDDADLDLVASNIIKGGFSYSGQ 296          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: GAPN_APIGR (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 4.740e-80
Identity = 143/163 (87.73%), Postives = 153/163 (93.87%), Query Frame = 3
Query:   12 KGXFLVSHIFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            +G FLVS  FPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKI PALIAGN+LVLKPPTQGAVA LHMVHCFHLAGFPKGLISC+TGKGSEIGDFLTMHP VNCISFTGGDTGI+ISKKAGM+PL MELGGK+AC VLEDADLDLVA+N+IKG  SYSG+
Sbjct:  134 EGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIGPALIAGNALVLKPPTQGAVACLHMVHCFHLAGFPKGLISCITGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLVASNVIKGGFSYSGQ 296          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: GAPN_WHEAT (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Triticum aestivum GN=GAPN PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 1.379e-79
Identity = 144/163 (88.34%), Postives = 152/163 (93.25%), Query Frame = 3
Query:   12 KGXFLVSHIFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            +G  LVS  FPGNER KYCL+SK+PLGVVLAIPPFNYPVNLAVSKI PALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP VNCISFTGGDTGI+ISKKAGM+PL MELGGK+AC VLEDADLDLVAANI+KG  SYSG+
Sbjct:  134 EGKLLVSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLAVSKIGPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLVAANIVKGGFSYSGQ 296          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: GAPN_NICPL (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 3.072e-79
Identity = 143/163 (87.73%), Postives = 152/163 (93.25%), Query Frame = 3
Query:   12 KGXFLVSHIFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            +G FLVS  FPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVA LHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP V+CISFTGGDTG++ISKKAGMIPL MELGGK+AC VLEDADLDL A +I+KG  SYSG+
Sbjct:  134 EGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVACLHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVHCISFTGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLAAGSIVKGGFSYSGQ 296          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: GAPN_MAIZE (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays GN=GPN1 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 2.202e-77
Identity = 140/163 (85.89%), Postives = 150/163 (92.02%), Query Frame = 3
Query:   12 KGXFLVSHIFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            +G  +VS  FPGNER KYCL+SKIPLGVVLAIPPFNYP NLA SKI PALIAGN+LVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHP VNCISFTGGDTGI+ISKKAGM+PL MELGGK+AC VLEDADLDLV+ANI+KG  SYSG+
Sbjct:  136 EGKLVVSDSFPGNERNKYCLSSKIPLGVVLAIPPFNYPANLAGSKIGPALIAGNALVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLVSANIVKGGFSYSGQ 298          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: GAPN_SCEVA (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Scenedesmus vacuolatus GN=GapN PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.176e-54
Identity = 101/134 (75.37%), Postives = 116/134 (86.57%), Query Frame = 3
Query:   99 LAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            LAIPPFNYPVNLAVSK+APAL+AGN++VLKPP+QG VA +HM+ CF  AG P G ++ VTGKGSEIGDFLT HPAVNCISFTGGDTGI+IS+KAGM+PL MELGGK+AC V  DADLDL A +IIKG  SYSG+
Sbjct:    1 LAIPPFNYPVNLAVSKLAPALMAGNTVVLKPPSQGVVAGIHMIKCFQAAGLPAGTVNLVTGKGSEIGDFLTTHPAVNCISFTGGDTGIAISRKAGMVPLQMELGGKDACIVCSDADLDLAATHIIKGGFSYSGQ 134          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: GAPN_STRMU (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus mutans GN=gapN PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 3.672e-40
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = 3
Query:   12 KGXFLVSHIFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGIS--ISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            +G  L    F    + K  +  + P+G+VLAI PFNYPVNLA SKIAPALIAGN +  KPPTQG+++ L +   F  AG P G+ + +TG+GSEIGD++  H AVN I+FT G TGI   I K AGM P+ +ELGGK++  VLEDADL+L A NII G   YSG+
Sbjct:  119 EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFT-GSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQ 282          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: GAPN_STREI (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equinus GN=gapN PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 2.631e-38
Identity = 82/164 (50.00%), Postives = 109/164 (66.46%), Query Frame = 3
Query:   12 KGXFLVSHIFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGG-DTGISISKKAGMIPLHMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            +G  L    F    + K  +  + P+G+VLAI PFNYP+NLA SKIAPALI+GN + LKPPTQG+++ L +   F  AG P G+ + +TG+GS IGD++  H AVN I+FTG    G  I   AGM P+ +ELGGK++  +LEDADLDL A NI+ G   YSG+
Sbjct:  119 EGEVLEGGSFDPASKKKIAIVRREPVGLVLAISPFNYPINLAGSKIAPALISGNVVALKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSVIGDYIVEHEAVNYINFTGSTPVGEHIGHLAGMRPIMLELGGKDSAIILEDADLDLAAKNIVAGAYGYSGQ 282          
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: ALDH_BACST (Aldehyde dehydrogenase, thermostable OS=Bacillus stearothermophilus GN=aldHT PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.916e-29
Identity = 64/172 (37.21%), Postives = 104/172 (60.47%), Query Frame = 3
Query:    3 FSEKGXFLVSHIFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPL------HMELGGKNACTVLEDADLDLVAANIIKG*ISYSGK 500
            ++ +G   +  + P ++      T+++PLGVV  I P+N+PV + + K+APAL+ GN++VLKP ++ AV A  ++ CFH AGFPKG+++ V G GS +G  +  HP ++ ++FTG +T   + K+ G           +E+GGKN   V +DADLDL     I G +  +G+
Sbjct:  119 YAGEGARKIGDVIPSSDSEGLLFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVLKPASETAVTAAKVIECFHEAGFPKGVVNMVCGSGSVVGQGIANHPDIDGVTFTGSNT---VGKQVGRAAFERGAKYQLEMGGKNPVIVAKDADLDLAVEGTISGGLRSTGQ 287          
The following BLAST results are available for this feature:
BLAST of EY665287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 475
Match NameE-valueIdentityDescription
GAPN_PEA1.924e-8190.80NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_ARATH1.247e-8089.57NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_APIGR4.740e-8087.73NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_WHEAT1.379e-7988.34NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_NICPL3.072e-7987.73NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_MAIZE2.202e-7785.89NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_SCEVA1.176e-5475.37NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STRMU3.672e-4053.33NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STREI2.631e-3850.00NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
ALDH_BACST2.916e-2937.21Aldehyde dehydrogenase, thermostable OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665287 ID=EY665287; Name=EY665287; organism=Citrus sinensis; type=EST; length=1136bp
AATTCTCGGAGAAGGGAANGTTTTTGGTGTCCCATATCTTCCCCGGAAAT
GAGAGGACTAAGTATTGTCTCACTTCAAAGATTCCACTTGGTGTGGTTTT
GGCCATTCCACCGTTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGCCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCGAAGAAAGCTGGTATGATCCCTCTTCATAT
GGAGTTGGGAGGCAAAAATGCTTGTACCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGATGAATTTCTTACAGTGGTAAA
AATGCACTGCATTAAAGTGTCTTGGTGAAGAATCTGTACAAATTCCCTGT
CAAAAAGGTAAAGTTAATTGGAAAACTAAAATTGGCCCTCCTAAAAAAAC
TGGTAATCCATCAATTGTGTCAATTTTTGCAATTTCTTGAAGGGTGGTAG
GAAGCCAAACAAAGAAAAACATCTTAAAAAACAAGAAAAAGAACCTCACA
GGCCTTTTCTTAGAAGTGAAAAAAAATAAAACAAGGAGAAAAATTTAAAC
ATTTACCTGAATAATATGATATTTAAGAGATACACAGATAGCACACATTG
AACTAGTATTTATTCAAAGAAATTAAATATGTACAGATATAAAGAAAACT
ACCAAAAGTTCCCCCCTTGATAAAATTTTCTTTAGTGTGTACATACTATG
AATAAAGCAAAAAAACTATTCTAACTTAGACTAGAAAATCAATGCCAATA
CGGTAAAATAATGATTTGACATAGAATGATATTTAATAGAAAATTAGAAA
TAATATCAATAAGTGATATAAATTAAACCTTGATGAATGAAACGAGGAGA
GGACTAATGATGAAATACAAAAAATAATAAACAAAAAGAATAAAAAACCA
TCAAGAACTANCTAATACAATGCCGAACAACACGCA
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