CV884461

Overview
NameCV884461
Unique NameCV884461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884461_ssr1 microsatellite CV884461_ssr1:1..14. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3342 contig Csv1_Contig3342:1..803. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.781e-66
Identity = 118/161 (73.29%), Postives = 136/161 (84.47%), Query Frame = 1
Query:  319 SQFLVLGFLYLVLCSCFSYSLADQDKDKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            ++ L+L F +L+L    S S  +Q+KD+I  LPG+P +V F+ +SGY++VN+ AGRALFYWL ESP S  PES+PL+LWLNGGPGCSSVAYGAAEEIGPFRI PDGKTLY NPYSWNKLANLLFLESPAGVGFSY+NTTSDLYTAGD RTAEDAY FLV W
Sbjct:    2 ARLLLLFFFFLILLHYASCSRHEQEKDRIFHLPGEPNDVSFSHFSGYITVNESAGRALFYWLTESPPSENPESKPLVLWLNGGPGCSSVAYGAAEEIGPFRINPDGKTLYHNPYSWNKLANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYVFLVKW 162          
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.538e-62
Identity = 113/162 (69.75%), Postives = 135/162 (83.33%), Query Frame = 1
Query:  325 FLVLGFLYLVLCSCF---SYSLADQDKDKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            FL++  L  +  SC    S  + +Q +D+I+ LPGQP+NVDF QYSGYV+V+++ GRALFYWL+ESP +R P+SRPL+LWLNGGPGCSSVAYGAAEEIGPFR+  DGKTL+   Y+WNKLANLLFLESPAGVGFSY+NTTSDLYT GD RTAED+Y FLVNW
Sbjct:    5 FLLIILLLTISTSCCAAPSSYVEEQLRDRISNLPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFRVGSDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNW 166          
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.258e-53
Identity = 96/136 (70.59%), Postives = 115/136 (84.56%), Query Frame = 1
Query:  394 KDKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            KDKI  LPGQP N++F+Q+SGYV+V+  AGRALFYWL E+P  R   ++PL+LWLNGGPGCSS+AYGA+EE+GPFR+ PDGKTL LN Y+WNK+AN+LFL+SPAGVGFSYTNT+SD  T GD RT EDAY FLV W
Sbjct:   35 KDKIISLPGQPPNLNFSQFSGYVTVDPAAGRALFYWLTEAP--RPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRFLVRW 168          
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.760e-51
Identity = 103/166 (62.05%), Postives = 125/166 (75.30%), Query Frame = 1
Query:  310 MGHSQFLVLGFLYLVLCSCF--SYSLADQDKDKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            M  + F+ L  L  +L + F  S S  +Q+KD+I  LPGQP  V F+QYSGYV+VNQ  GRALFYWL ES +S  P ++PL+LWLNGGPGCSS+AYGA+EEIGPFRI   G  LYLN ++WNK ANLLFLESPAGVG+SYTNT+SDL  +GD RTA+D   FL+ W
Sbjct:    1 MARTHFIFL-LLVALLSTTFPSSSSSREQEKDRIKALPGQP-KVAFSQYSGYVNVNQSHGRALFYWLTES-SSPSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRINKTGSNLYLNKFAWNKDANLLFLESPAGVGYSYTNTSSDLKDSGDERTAQDNLIFLIKW 163          
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.159e-49
Identity = 91/157 (57.96%), Postives = 117/157 (74.52%), Query Frame = 1
Query:  331 VLGFLYLVLCSCFSYSLADQDKDKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            ++   +L         L+ +++DK++ LPGQ  NV F  YSG+V+ N+Q GRALFYWL E+    K  S+PL+LWLNGGPGCSSVAYG AEEIGPF I+ DGKTLYLN YSWN+ AN+LFL++P GVG+SY+NT+SDL + GD RTAED+  FL+ W
Sbjct:   14 LIAIAFLATAHLCEAGLSQKEQDKVSKLPGQNFNVSFAHYSGFVATNEQLGRALFYWLFEAVEDAK--SKPLVLWLNGGPGCSSVAYGEAEEIGPFHIKADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKW 168          
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 5.754e-49
Identity = 94/158 (59.49%), Postives = 119/158 (75.32%), Query Frame = 1
Query:  328 LVLGFLYLVLCSCFSYSLADQDKDKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            L++  L +   S  S SL +Q++D I  LPGQP  V F+Q+SGYV+VN+  GR+LFYWL ESP+S    ++PL+LWLNGGPGCSS+ YGA+EEIGPFRI   G  LYLN ++WN  AN+LFLESPAGVGFSYTNT+SDL  +GD RTA++   FL+ W
Sbjct:    6 LIIILLVISSTSSSSSSLREQEEDMIKALPGQP-QVGFSQFSGYVTVNESHGRSLFYWLTESPSSS--HTKPLLLWLNGGPGCSSIGYGASEEIGPFRINKTGSNLYLNKFTWNTEANILFLESPAGVGFSYTNTSSDLKDSGDERTAQENLIFLIKW 160          
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.754e-49
Identity = 97/164 (59.15%), Postives = 122/164 (74.39%), Query Frame = 1
Query:  310 MGHSQFLVLGFLYLVLCSCFSYSLADQDKDKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            M  +  L L F+ L L +  S S  +Q++D+I  LPGQP  V F+Q+SGYV+VN+  GR+LFYWL ES +S  P ++PL+LWLNGGPGCSS+AYGA+EEIGPFRI   G  LYLN +SWN  ANLLFLESP GVGFSYTNT+SD   +GD RTA++   FL++W
Sbjct:    1 MARTHLLFLLFVLLSLATS-STSTKEQEEDRIKALPGQP-KVGFSQFSGYVTVNESHGRSLFYWLTES-SSHSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRISKTGCNLYLNNFSWNTEANLLFLESPVGVGFSYTNTSSDFEESGDERTAQENLIFLISW 161          
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.515e-49
Identity = 87/138 (63.04%), Postives = 108/138 (78.26%), Query Frame = 1
Query:  388 QDKDKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            ++ D++  LPG P  VDF QY+GYV+V+  AGRALFY+L E+      +++PL+LWLNGGPGCSS+ YGA EE+GPFR+  DGKTLY NPYSWN  AN+LFLESPAGVG+SY+NTT+D   +GD  TAEDAY FL NW
Sbjct:   81 KEADRVEALPGHPRGVDFAQYAGYVTVDAAAGRALFYYLAEAVGGNGDKTKPLLLWLNGGPGCSSLGYGAMEELGPFRVMSDGKTLYSNPYSWNHAANVLFLESPAGVGYSYSNTTADYGRSGDNGTAEDAYQFLDNW 218          
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.417e-47
Identity = 89/139 (64.03%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  385 DQDKDKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            + + D+IT LPGQP NV F Q+SGYV+V++ +GR+LFYWL E  AS  P S+PL++WLNGGPGCSSVAYGA+EEIGPFRI   G  LYLN ++WN ++NLLFLE+PAGVGFSYTN +SDL+  GD RTA+D+  FL+ W
Sbjct:   32 EAEADRITSLPGQP-NVTFEQFSGYVTVDKLSGRSLFYWLTE--ASDLPLSKPLVIWLNGGPGCSSVAYGASEEIGPFRISKGGSGLYLNKFAWNSISNLLFLEAPAGVGFSYTNRSSDLFNTGDRRTAKDSLQFLIQW 167          
BLAST of CV884461 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.851e-47
Identity = 88/135 (65.19%), Postives = 109/135 (80.74%), Query Frame = 1
Query:  397 DKITVLPGQPTNVDFNQYSGYVSVNQQAGRALFYWLIESPASRKPESRPLILWLNGGPGCSSVAYGAAEEIGPFRIRPDGKTLYLNPYSWNKLANLLFLESPAGVGFSYTNTTSDLYTAGDGRTAEDAYTFLVNW 801
            D+I  LPGQP  VDF+ YSGY++V++ AGR+LFY L E+P   +P   PL+LWLNGGPGCSSVAYGA+EE+G FR++P G  L LN Y WNK+AN+LFL+SPAGVGFSYTNT+SD+YT+GD RTA D+Y FL  W
Sbjct:    9 DRIARLPGQPA-VDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPA--PLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKW 140          
The following BLAST results are available for this feature:
BLAST of CV884461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
SCP26_ARATH1.781e-6673.29Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP27_ARATH4.538e-6269.75Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP28_ARATH2.258e-5370.59Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP24_ARATH2.760e-5162.05Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP29_ARATH1.159e-4957.96Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP23_ARATH5.754e-4959.49Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP22_ARATH5.754e-4959.15Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
CBP23_HORVU7.515e-4963.04Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
SCP25_ARATH1.417e-4764.03Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
CBP2_WHEAT1.851e-4765.19Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F01_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884461 ID=CV884461; Name=CV884461; organism=Citrus sinensis; type=EST; length=803bp
CACACACACACACACTGCTTAGTTAAATTCTTTGACAACCCAGATAGGTT
GGGATCTGGGTTTTTGATTTTAGTTTGACTTTTGTACTTCTTTTTTGTGT
TTCAGTTTCTTGTTTGAGGACTTCGTAGTTAAGTTCCTTAAGAGCTCAGA
ACTGTTTTGTGTTCTGCTAGTGTTTGATCGACACCTGTACTTTAAGGATT
CGTGTTTCAAGATTCTGTTGACATATTTCTTTGCAAAATCCAGATACGTT
TAAAGATTCGTGTGCTTCTGGGTTTTGCTTCTTTTTGTTTTATCTTAATT
GTTCACTTAATGGGACATTCACAATTTCTTGTTCTTGGCTTTTTGTACCT
TGTATTATGTTCATGTTTCTCCTATTCTTTAGCTGATCAAGATAAAGACA
AAATCACTGTGTTACCAGGGCAACCGACAAATGTTGATTTTAATCAGTAC
TCAGGTTATGTAAGCGTAAACCAACAAGCTGGGAGGGCATTGTTTTATTG
GTTAATTGAGTCACCAGCGAGTCGTAAACCTGAGTCAAGGCCACTCATTT
TGTGGCTCAATGGAGGTCCTGGTTGCTCTTCTGTTGCCTATGGAGCAGCT
GAAGAGATTGGGCCTTTTCGCATTAGGCCTGATGGGAAGACTCTTTACTT
GAATCCCTATTCTTGGAACAAGCTGGCAAATTTGCTGTTTCTTGAATCTC
CAGCTGGAGTTGGTTTTTCATATACAAATACCACATCTGATTTGTACACT
GCAGGCGATGGGAGAACAGCTGAAGATGCATACACATTTCTCGTCAATTG
GTT
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