CV884459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884459 vs. ExPASy Swiss-Prot
Match: GOGC1_ARATH (Golgin candidate 1 OS=Arabidopsis thaliana GN=GC1 PE=2 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 2.649e-63 Identity = 158/305 (51.80%), Postives = 198/305 (64.92%), Query Frame = 3 Query: 15 SIPLTEQSKDMSKHDADRVEIPETFTDLDTATP---NGEILNENDSDVHLNHPPSPLPPKEMGIVNEDRIDDAGQITKSADADAPLK-----IDSKIQAVDPPVNSESSLKDA--DVKVETLSNKRKQQALK---------------ADDPPTKEQDQLDEAQGLLKTTISTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLVAERELSRSYEARIKQLEQELSVYKSEVTKVESNLAEALAAKNSEIETLVSSIDALKKQAALSEGNLASLQMNMESIMRNRELTETRMIQALREELASVE 854 S+PL+ +K D V E+ D D + +G+I N++ L P LP KE+ +V + + DA + + D K +DS + A P VN + + +VKV T N K+Q K AD K QDQL+EAQGLLK T+STGQSKEARLARVCAGLSSRLQE K+ENAQLEELL AE+EL++SYEA I+ L+++LS KSEVTKVES++ EALAAKNSEIETLVS++DALK QAAL+EG L+SLQ +MESIMRNREL ETRM+QALREELA+ E Sbjct: 116 SLPLSVAD---TKSDDAAVVAQESIVDGDRSESKHADGDIPNDS-----LVQPSPSLPDKEIEVVVSENLMDAPKNGTQRELDDSSKRDVENLDSVVHA--PSVNEGNVAQSTGDEVKVGTSINLEKEQEPKVPVTSTNLKREQDRRADTTSMKIQDQLEEAQGLLKATVSTGQSKEARLARVCAGLSSRLQEIKAENAQLEELLTAEQELTKSYEASIRHLQKDLSAAKSEVTKVESSMVEALAAKNSEIETLVSAMDALKNQAALNEGKLSSLQGDMESIMRNRELAETRMMQALREELATTE 410
BLAST of CV884459 vs. ExPASy Swiss-Prot
Match: GOGA5_ORYSJ (Golgin-84 OS=Oryza sativa subsp. japonica GN=Os01g0744400 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.009e-54 Identity = 118/188 (62.77%), Postives = 145/188 (77.13%), Query Frame = 3 Query: 303 NSESSLKDADVKVETLSNK----RKQQALKADDPPTKEQDQLDEAQGLLKTTISTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLVAERELSRSYEARIKQLEQELSVYKSEVTKVESNLAEALAAKNSEIETLVSSIDALKKQAALSEGNLASLQMNMESIMRNRELTETRMIQALREELASVE 854 +++ S K D K E LS+ QQ K D K+QDQL+EA+GLLK + TGQSKEARLARVCAGLSSRLQEYKSENAQLEELLV ERE SYEA +KQL+QELS+ + E ++ ESN+ +AL AKN+EIE+LV S+D+ KK+AA SE LA+LQ +M+ + RNRELTETR+IQALREELA+VE Sbjct: 223 DTQVSGKSQDSKREGLSDSPESTENQQEHKLDSGSVKDQDQLEEARGLLKNVVKTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLVQEREKCSSYEAHMKQLQQELSMSRVEGSRAESNMVDALTAKNAEIESLVKSLDSWKKKAAASEEKLAALQEDMDGLKRNRELTETRVIQALREELATVE 410 The following BLAST results are available for this feature:
BLAST of CV884459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884459 ID=CV884459; Name=CV884459; organism=Citrus sinensis; type=EST; length=856bpback to top |