CV884454

Overview
NameCV884454
Unique NameCV884454
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1574 contig Csv1_Contig1574:998..1852. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 433.721 bits (1114), Expect = 6.202e-121
Identity = 210/218 (96.33%), Postives = 215/218 (98.62%), Query Frame = -3
Query:  199 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 852
            TSHECLLLPYEQSLTRLDSTSGLYYDCSAHF+WVGERTRQLDGAHVEFL+GVANPLGIKVSDKMDP+ LVKLIEILNP NK GRITIITRMGAENMRVKLPHLIRAVRR+GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR+
Sbjct:  317 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPSALVKLIEILNPDNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRL 534          
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 431.409 bits (1108), Expect = 3.078e-120
Identity = 208/218 (95.41%), Postives = 215/218 (98.62%), Query Frame = -3
Query:  199 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 852
            TSHECLLLPYEQSLTR DSTSGLYYDCSAHFLWVGERTRQLDGAHVEFL+G+ANPLGIKVSDKMDP+ LVKLIEILNPQNK GRITIITRMGAENMRVKLPHLIRAVRR+GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERLRKRR+
Sbjct:  316 TSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRL 533          
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 1.170e-119
Identity = 207/218 (94.95%), Postives = 215/218 (98.62%), Query Frame = -3
Query:  199 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 852
            TSHECLLLPYEQSLTR DSTSGL+YDCSAHFLWVGERTRQLDGAHVEFL+G+ANPLGIKVSDKMDP+ LVKLIEILNPQNK GRITIITRMGAENMRVKLPHLIRAVRR+GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERLRKRR+
Sbjct:  316 TSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRL 533          
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 7.096e-117
Identity = 201/218 (92.20%), Postives = 211/218 (96.79%), Query Frame = -3
Query:  199 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 852
            TSHECLLLPYEQSLTR DSTSGL+YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVSDKM+P +LVKLIEILNP NKPGRITIITRMGAENMRVKLPHLIRAVR SGQIVTW++DPMHGNTIKAPCGLKTRPFDSI AEVRAFFDVH+QEGSHPGG+HLEMTGQNVTECIGGSRTVTFDDLS RYHTHCDPRLNASQSLELAFIIAERLR+RR+
Sbjct:  307 TSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRNSGQIVTWITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDVHDQEGSHPGGIHLEMTGQNVTECIGGSRTVTFDDLSDRYHTHCDPRLNASQSLELAFIIAERLRRRRM 524          
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 413.305 bits (1061), Expect = 8.675e-115
Identity = 198/217 (91.24%), Postives = 207/217 (95.39%), Query Frame = -3
Query:  202 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR 852
            TSHECLLLPYEQSLTRLDSTSGLYYDCSAH +W GERTRQLDGAHVEFL+G+ANPLGIKVS+KMDP ELVKL+EILNP NKPGRIT+I RMGAENMRVKLPHLIRAVRRSGQIVTWV DPMHGNTIKAPCGLKTR FDSI AEVRAF DVHEQEGSH GG+HLEMTGQNVTECIGGSRTVT+DDLSSRYHTHCDPRLNASQSLELAFI+AERLRKRR
Sbjct:  302 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLGIKVSNKMDPFELVKLVEILNPNNKPGRITVIVRMGAENMRVKLPHLIRAVRRSGQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFLDVHEQEGSHAGGIHLEMTGQNVTECIGGSRTVTYDDLSSRYHTHCDPRLNASQSLELAFIVAERLRKRR 518          
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 410.609 bits (1054), Expect = 5.623e-114
Identity = 198/218 (90.83%), Postives = 209/218 (95.87%), Query Frame = -3
Query:  199 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 852
            TSHECLLLPYEQSLTR DST+G +YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVSDKM+P ELVKLIEILNP NKPGRITIITRMGAENMRVKLPHLIRAVR +GQIVTW++DPMHGNTIKAPCGLKTRPFDSI AEVRAFFDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDL  RYHTHCDPRLNASQSLEL+FIIAERLR++RI
Sbjct:  322 TSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPTELVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRHAGQIVTWITDPMHGNTIKAPCGLKTRPFDSI-AEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELSFIIAERLRRKRI 538          
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 406.371 bits (1043), Expect = 1.060e-112
Identity = 192/218 (88.07%), Postives = 207/218 (94.95%), Query Frame = -3
Query:  199 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 852
            TSHECLLLPYEQ+LTR DSTSGL+YDCSAH +WVGERTRQLDGAHVEFL+GVANPLGIKVS KMDPNEL+KLI+ILNP NKPGRIT+I RMGAENMRVKL HL+RAVR +GQIVTWV DPMHGNTIKAPCGLKTR FDSI AEVRAFFDVHEQEGSHPGG+HLEMTGQNVTECIGGSRTVT+DDL SRYHTHCDPRLNASQSLEL+FI+AERLR+RR+
Sbjct:  289 TSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELIKLIDILNPANKPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFFDVHEQEGSHPGGIHLEMTGQNVTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRM 506          
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 403.29 bits (1035), Expect = 8.977e-112
Identity = 194/218 (88.99%), Postives = 209/218 (95.87%), Query Frame = -3
Query:  199 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 852
            TSHECLLLPYEQ+LTR DSTSGLYYDCSAH LWVGERTRQLDGAHVEFL+G+ANPLGIKVSDKM P+ELVKLIEILNPQNKPGRIT+I RMGAENMRVKLP+LIRAVR +GQIVTWVSDPMHGNTI AP GLKTR FD+IRAE+RAFFDVH+QEGS PGGVHLEMTGQNVTEC+GGSRT+T++DLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR+
Sbjct:  279 TSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMVPSELVKLIEILNPQNKPGRITVIVRMGAENMRVKLPNLIRAVRGAGQIVTWVSDPMHGNTIMAPGGLKTRSFDAIRAELRAFFDVHDQEGSFPGGVHLEMTGQNVTECVGGSRTITYNDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRL 496          
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 2.211e-110
Identity = 189/218 (86.70%), Postives = 205/218 (94.04%), Query Frame = -3
Query:  199 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 852
            TSHECLLLPYEQ+LTR DSTSGL+YDCSAH +WVGERTRQLDGAHVEFL+GVANPLGIKVS KMDP EL+KLI+ILNP NKPGRIT+I RMGAENMRVKL HL+RAVR +GQIVTWV DPMHGNTIKAPCGLKTR FDSI+AEVRAFFDVHEQEGSHP  +HLEMTGQNVTECIGGSRTVT+DDL SRYHTHCDPRLNASQSLEL+FI+AERLR+RR+
Sbjct:  289 TSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPKELIKLIDILNPANKPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSIQAEVRAFFDVHEQEGSHPWCIHLEMTGQNVTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRM 506          
BLAST of CV884454 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 366.696 bits (940), Expect = 9.311e-101
Identity = 179/215 (83.26%), Postives = 191/215 (88.84%), Query Frame = -3
Query:  208 TSHECLLLPYEQSLTRLDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRK 852
            TSHECLLLPYEQ+LTR DSTSGL+YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVS KMDPNELV LIEILNP NKPGRIT+I RMGAENMRVKLPHLIRAVR +GQIVTWV DPMHGNTIKAPCGLKTR FD+I AEVRAF+DVHEQEG+ PG           TEC+GGSRT+T+DD  +RYHTHCDPRLNASQSLELAFIIAERLRK
Sbjct:  280 TSHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELVNLIEILNPTNKPGRITVIVRMGAENMRVKLPHLIRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDAILAEVRAFYDVHEQEGTLPG-----------TECVGGSRTITYDDRQTRYHTHCDPRLNASQSLELAFIIAERLRK 483          
The following BLAST results are available for this feature:
BLAST of CV884454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AROF_TOBAC6.202e-12196.33Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLTU3.078e-12095.41Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC1.170e-11994.95Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ORYSJ7.096e-11792.20Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ARATH8.675e-11591.24Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ORYSJ5.623e-11490.83Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU1.060e-11288.07Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ARATH8.977e-11288.99Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC2.211e-11086.70Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_CATRO9.311e-10183.26Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003E09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884454 ID=CV884454; Name=CV884454; organism=Citrus sinensis; type=EST; length=854bp
TTTTTATTCTTCGTTCCTTAGTCTCAAGCCATCATGTCCTTTTATATACA
CATTCAGTACATGACATAAATTAAATCAAAAAACCAAAATTAAAAATACT
AGCACAGCTGCTAAACTTGAAGAAAAATAATAATATATGCCAGCAGTACT
CGGGCCATTCTACAGGAGAGAAGAAGAGGCAAGAGGTTGCTGTGAGCTAA
TCCTCCTCTTTCTGAGGCGCTCGGCAATGATGAAGGCAAGCTCAAGTGAC
TGTGAAGCATTGAGCCTAGGGTCACAGTGGGTGTGGTAGCGTGAACTCAA
GTCGTCGAATGTCACTGTTCTTGACCCACCGATGCACTCTGTCACATTCT
GGCCTGTCATCTCCAAATGTACTCCTCCCGGGTGACTTCCTTCTTGCTCA
TGCACATCAAAGAATGCTCTCACTTCAGCCCTGATAGAATCGAAGGGACG
AGTTTTCAGGCCGCAGGGAGCCTTGATGGTGTTACCATGCATAGGGTCAC
TGACCCATGTAACAATTTGGCCAGAGCGGCGGACTGCCCTAATTAGATGA
GGAAGCTTCACTCTCATGTTCTCAGCACCCATTCTAGTGATAATAGTTAT
CCTCCCCGGTTTATTCTGAGGATTCAAAATCTCAATAAGCTTCACTAGCT
CATTAGGATCCATCTTATCACTGACCTTAATGCCAAGGGGATTTGCTACA
CCTTTCAAAAACTCAACATGCGCACCATCCAGCTGCCTGGTACGTTCTCC
AACCCAAAGAAAATGGGCAGAGCAATCATAGTAAAGACCAGAAGTTGAAT
CCAGCCGGGTTAGAGATTGCTCATATGGCAAGAGCAAGCACTCATGGGAT
GTCC
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