CV884453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884453 vs. ExPASy Swiss-Prot
Match: RM46_PONAB (39S ribosomal protein L46, mitochondrial OS=Pongo abelii GN=MRPL46 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = -2 Query: 305 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSY--KQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEY 715 +++ RITE D+ NDR SL R LDR L L++ E FG + +W P+ ++ E+LR AE L ++ + F+GNAP GH + + M + K FFFK+ ++ + G VWVTKDEL +Y Sbjct: 129 LQFKLGARITEADEKNDRTSLNRKLDRNLVLLVR-EKFG---DQDVWILPQTEWQPGETLRGTAERTLATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGHHVWVTKDELGDY 263
BLAST of CV884453 vs. ExPASy Swiss-Prot
Match: RM46_HUMAN (39S ribosomal protein L46, mitochondrial OS=Homo sapiens GN=MRPL46 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = -2 Query: 305 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSY--KQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEY 715 +++ RITE D+ NDR SL R LDR L L++ E FG + +W P+ ++ E+LR AE L ++ + F+GNAP GH + + M + K FFFK+ ++ + G VWVTKDEL +Y Sbjct: 129 LQFKLGARITEADEKNDRTSLNRKLDRNLVLLVR-EKFG---DQDVWILPQAEWQPGETLRGTAERTLATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGHHVWVTKDELGDY 263
BLAST of CV884453 vs. ExPASy Swiss-Prot
Match: RM46_MOUSE (39S ribosomal protein L46, mitochondrial OS=Mus musculus GN=Mrpl46 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.579e-13 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = -2 Query: 305 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQ--PAEKMPDVPSYKQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEY 715 +++ P R TE DK NDR SL R LDR L L++ + G + +W P+ ++ E+LR AE L ++ + F+GNAP GH + A + K FFFK+ ++ + GK VW +K+EL +Y Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNLVLLVREKL----GDQDVWMLPQVEWQPGETLRGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIQTESDLGVKVFFFKALLLTGDFVQAGKKSRHVWASKEELGDY 261
BLAST of CV884453 vs. ExPASy Swiss-Prot
Match: RM46_RAT (39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus GN=Mrpl46 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13 Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = -2 Query: 305 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQ--PAEKMPDVPSYKQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEY 715 +++ P R TE DK NDR SL R LDR L L++ + G + +W P+ ++ E+LR AE L ++ + F+GNAP GH + A + K FFFK+ ++ + GK VW +K+EL +Y Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNLILLVREKL----GDQDLWMLPQVEWQPGETLRGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIRTESDLGVKVFFFKALLLTGDFVQTGKKGRHVWASKEELGDY 261
BLAST of CV884453 vs. ExPASy Swiss-Prot
Match: RM17_YEAST (54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae GN=MRPL17 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12 Identity = 53/167 (31.74%), Postives = 81/167 (48.50%), Query Frame = -2 Query: 275 FLDKSNSRGKGDYQMEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPE-KVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQPAEKMPDVPSYKQFFFKSQVIASNKFTI-----GKCEDFVWVTKDELMEYFPESAEFLNK 757 F + + K D +P RITE D++ND KSL+R L R LYL++ ++ W FP + + + L AE L+ + GD +T+ V P+G V+Q +F KS ++A KF + EDF W+TK E+ EY P+ ++ NK Sbjct: 124 FSNNQKEQSKDDVNRPVIPNDRITEADRSNDMKSLERQLSRTLYLLVKDKS-------GTWKFPNFDLSDESKPLHVHAENELKLLSGDQIYTWSVSATPIG--VLQDERNRT-----AEFIVKSHILA-GKFDLVASKNDAFEDFAWLTKGEISEYVPK--DYFNK 273
BLAST of CV884453 vs. ExPASy Swiss-Prot
Match: RM46_BOVIN (39S ribosomal protein L46, mitochondrial OS=Bos taurus GN=MRPL46 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 44/139 (31.65%), Postives = 72/139 (51.80%), Query Frame = -2 Query: 305 MEYVPAPRITETDKTNDRKSLQRALDRRLYLILYGETFGAPGGKPIWHFPEKVYESEESLRKCAECALQSVLGDLSHTYFVGNAPMGHMVMQ--PAEKMPDVPSYKQFFFKSQVIASNKFTIGKCEDFVWVTKDELMEY 715 +++ P RIT+ D NDR SL R LDR L L++ + G + +W P+ ++ E+LR+ AE L ++ + F+GNAP GH + A + K FFFK+ ++ + + VW +K+EL +Y Sbjct: 127 LQFKPGARITDADVKNDRSSLHRKLDRNLILLVKDKL----GDQDVWMLPQAEWQPGETLRQTAERTLATLSENNLEAKFLGNAPCGHYKFKFPQAVRAEGSLGAKIFFFKALLLTGDFSPAVEKGRHVWASKEELGDY 261 The following BLAST results are available for this feature:
BLAST of CV884453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884453 ID=CV884453; Name=CV884453; organism=Citrus sinensis; type=EST; length=890bpback to top |