CV884446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1) HSP 1 Score: 290.812 bits (743), Expect = 7.305e-78 Identity = 144/235 (61.28%), Postives = 183/235 (77.87%), Query Frame = 2 Query: 215 FSILLELTASDDLDGFRKAIEEDG-HDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVHP 916 FS+LLE +A +DL GF+ +EE+G ID SGLWYGR +GS+KMGFEERTPLMIA++FGSK+VV Y+I +G VDVNR+CGSDG TALHCA SG SANS+E+V LLL SA+ +S DAYGN+P D+I + F++R KVL+ LLKG+ ++++ + Q + E + + E+S PR G+E+KEYPVD TLPDIKNG+YGTDEFRMY FK++PCSRAYSHDWTECPFVHP Sbjct: 11 FSLLLESSACNDLSGFKSLVEEEGLESIDGSGLWYGRRLGSKKMGFEERTPLMIAALFGSKEVVDYIISTGLVDVNRSCGSDGATALHCAVSGLSANSLEIVTLLLKGSANPDSCDAYGNKPGDVIFPCLSPVFSARMKVLERLLKGN-----DDLNEVNGQEESEPEVEVEVEVSPPR----GSERKEYPVDPTLPDIKNGVYGTDEFRMYAFKIKPCSRAYSHDWTECPFVHP 236
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 4.911e-66 Identity = 128/263 (48.67%), Postives = 174/263 (66.16%), Query Frame = 2 Query: 128 MCSGLKRKPTQTGFIMDTDSQKQDGLCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVHP 916 MCSG K + + + +S++++ +LLE A DDLD F++ +EE G D+DESGLWY R +GS+KMG EERTPLM+A+M+GS V+++++ +G DVNRACG + VT LHCA +G S N +EV+ +LLDASA VNSVDA GN+P D+ + + R+K ++ LL+G G G L D+ V E+E +S +YP D +LPDI G+YG+DEFRMY+FKV+PCSRAYSHDWTEC FVHP Sbjct: 1 MCSGPKSNLCSSRTLTEIESRQKEE---ETMLLLEFAACDDLDSFKREVEEKGLDLDESGLWYCRRVGSKKMGLEERTPLMVAAMYGSIKVLTFIVSTGKSDVNRACGEERVTPLHCAVAGCSVNMIEVINVLLDASALVNSVDANGNQPLDVFVRVSRFVASPRRKAVELLLRGGGVG------GLIDEAV----EEEIKIVS------------KYPADASLPDINEGVYGSDEFRMYSFKVKPCSRAYSHDWTECAFVHP 238
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 1.024e-63 Identity = 122/232 (52.59%), Postives = 157/232 (67.67%), Query Frame = 2 Query: 224 LLELTASDDLDGFRKAIEEDGH-DIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVHP 916 LLE A DDL F++ IEE+ +IDESG WY R +GS+KMGFEERTPLM+A+M+GS +V++Y+I +G DVNR C + VTALHCA SG S + VE++K+LLDASA N VDA GN+P DL+AK+ N +K ++ LL G +EE EE+E + T +YP D +LPDI G+YGTD+FRM++FKV+PCSRAYSHDWTECPFVHP Sbjct: 33 LLEFAACDDLSSFKREIEENPSVEIDESGFWYCRRVGSKKMGFEERTPLMVAAMYGSMEVLNYIIATGRSDVNRVCSDEKVTALHCAVSGCSVSIVEIIKILLDASASPNCVDANGNKPVDLLAKDSRFVPNQSRKAVEVLLTGIHGSVMEE------------EEEELKSVVT-----------KYPADASLPDINEGVYGTDDFRMFSFKVKPCSRAYSHDWTECPFVHP 241
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H30_ARATH (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g41900 PE=1 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 4.027e-60 Identity = 123/246 (50.00%), Postives = 156/246 (63.41%), Query Frame = 2 Query: 215 FSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQ------------EQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVHP 916 F+ LLEL A++D++G R +IE D +DE+GLWYGR GS+ M + RTPLM+A+ +GS DV+ ++ DVNRACG+D TALHCAASGG+ N+++VVKLLL A AD+N +DA G R D+I L K +LQ LL G+ E + V + + +P LK KKEYPVD +LPDIKN IY TDEFRMY+FKV+PCSRAYSHDWTECPFVHP Sbjct: 45 FASLLELAANNDVEGVRLSIERDPSCVDEAGLWYGRQKGSKAMVNDYRTPLMVAATYGSIDVIKLIVSLTDADVNRACGNDQTTALHCAASGGAVNAIQVVKLLLAAGADLNLLDAEGQRAGDVIVVPPKL--EGVKLMLQELLSADGSSTAERNLRVVTNVPNRSSSPCHSPTGENGGSGSGSPLGSPFKLKSTEFKKEYPVDPSLPDIKNSIYATDEFRMYSFKVRPCSRAYSHDWTECPFVHP 288
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.689e-55 Identity = 126/251 (50.20%), Postives = 162/251 (64.54%), Query Frame = 2 Query: 215 FSILLELTASDDLDGFRKAIEE-DGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALL--KGSGTGCVEEIDNLCDQVVYKM-----EEQEQPEIST---------PRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVHP 916 F+ LLEL A DD +G R+A+E DE+GLWYGR RK+ E RTPLM+A+ +GS V+ ++ VDVNR CGSDG TALHCAASGGS + VE VKLLL A AD ++ DA G RPAD+I+ + F++ K LQ LL +G G + + + ++ + E+ P + PRV+ +EKKEYPVD +LPDIKN IY +DEFRMY+FK++PCSRAYSHDWTECPFVHP Sbjct: 67 FAGLLELAADDDAEGLRRALERAPPAAADEAGLWYGR----RKV-LEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPKM-FDA-KIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVT--SEKKEYPVDPSLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHP 308
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H56_ARATH (Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana GN=At5g12850 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.651e-53 Identity = 109/249 (43.78%), Postives = 155/249 (62.25%), Query Frame = 2 Query: 209 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNL-GFNS-------RKKVLQALLKGSGTGCVEEIDNLCD-----QVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVHP 916 ++FS LLE A +D++GFR+ + D I++ GLWY R R+M E+RTPLM+AS++GS DVV +++ ++N +CG D TALHCAASG S NS++VVKLLL AD N DA+GNRP D++ + + G + + +++ L S + +L + ++ P + +EKKEYP+D +LPDIK+GIY TDEFRM++FK++PCSRAYSHDWTECPF HP Sbjct: 37 HSFSALLEFAADNDVEGFRRQLS-DVSCINQMGLWYRRQRFVRRMVLEQRTPLMVASLYGSLDVVKFILSFPEAELNLSCGPDKSTALHCAASGASVNSLDVVKLLLSVGADPNIPDAHGNRPVDVLVVSPHAPGLRTILEEILKKDEIISEDLHASSSSLGSSFRSLSSSPDNGSSLLSLDSVSSPTKPHGTDVTFASEKKEYPIDPSLPDIKSGIYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHP 284
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H50_ORYSJ (Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa subsp. japonica GN=Os07g0568300 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.177e-49 Identity = 117/244 (47.95%), Postives = 146/244 (59.84%), Query Frame = 2 Query: 224 LLELTASDDLDGFRKAIEEDGHDI----DESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIK-SGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLI----AKNCNLG----FNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVHP 916 LLEL A+DD+DG R A+ E G + D GLWYGR +E RTPLM+A+ +GS VVS ++ G VDVNR G+DG TALHCAASGGS N+V VVKLLL A AD + D+ G PAD+I A LG R++ L + + + D+ + +P + G KKEYPVD TLPDIK+ +Y +DEFRM+ FKV+PCSRAYSHDWTECPFVHP Sbjct: 27 LLELAAADDVDGLRGALAEGGEEAAELADGVGLWYGR-----SKAYEARTPLMVAATYGSAGVVSLLVGLGGCVDVNRRPGADGATALHCAASGGSRNAVAVVKLLLAAGADPATPDSAGRFPADVILAPPASPDALGDLEVLLGRRRALAVATSVASGSSSPPLSSSPDE--GNRSPSSRSSSLSPITVDRG--KKEYPVDPTLPDIKSSVYASDEFRMFAFKVRPCSRAYSHDWTECPFVHP 261
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 9.305e-49 Identity = 108/264 (40.91%), Postives = 151/264 (57.20%), Query Frame = 2 Query: 128 MCSGLKRKPTQTGFIMDTDSQKQDGLCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYG-RIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVHP 916 MCSG RKP+ Q+++ S+LLEL A+DD+ R+ +EE+ + +GLWYG G ++G E RT M+A+++GS V+ YV+ + + RA +DG T LH AA+GG+AN+V +LLL A A V+++ A G R DL+ + + +K ++ LLK + S P KKEYP DLTLPD+K+G++ TDEFRMY+FKV+PCSRAYSHDWTECPFVHP Sbjct: 1 MCSG-PRKPSTPPL----PQQQKEATVMAASLLLELAAADDVAAVRRVVEEEKVSLGVAGLWYGPSASGVARLGMERRTAAMVAALYGSTGVLGYVVAAAPAEAARASETDGATPLHMAAAGGAANAVAATRLLLAAGASVDALSASGLRAGDLLPRA-----TAAEKAIRLLLKSPAVS---------------PSSSPKKSASPPSPPPPQEAKKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHP 239
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H67_ORYSJ (Zinc finger CCCH domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=Os12g0515500 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.815e-29 Identity = 88/232 (37.93%), Postives = 114/232 (49.14%), Query Frame = 2 Query: 224 LLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGH-VDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVHP 916 LLEL A D+ G + + DE WY + G E TPLM+A+++GS + ++ + VD NRA S T LH AA+GGSA++ V LL A AD +D R +DL+A N K L +LL +KE+P D +LPDIKNG Y +D+FRMY+FKV+ CSRAYSHDWTECPFVHP Sbjct: 15 LLELAADDNAAGLGELLAAWPSLADEPAPWY-----TPARGAEPLTPLMVAAVYGSVGCLDALLSPPYLVDPNRASASSLSTPLHLAAAGGSASAPAAVSRLLAAGADPALLDHLQRRASDLVALPPNS--LPLKNHLLSLL---------------------------------------GARKEWPPDPSLPDIKNGAYASDDFRMYSFKVRACSRAYSHDWTECPFVHP 200
BLAST of CV884446 vs. ExPASy Swiss-Prot
Match: C3H54_ARATH (Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana GN=PEI1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11 Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 779 YPVDLTLPDIKNGIYGTDEFRMYTFKVQPCSRAYSHDWTECPFVH 913 Y +D ++P+I + IYG+DEFRMY +K++ C R SHDWTECP+ H Sbjct: 34 YEIDPSIPNIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAH 78 The following BLAST results are available for this feature:
BLAST of CV884446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884446 ID=CV884446; Name=CV884446; organism=Citrus sinensis; type=EST; length=918bpback to top |