CV884444

Overview
NameCV884444
Unique NameCV884444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV884444_ssr353 microsatellite CV884444_ssr353:353..376. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1135..1962. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.736e-71
Identity = 126/150 (84.00%), Postives = 136/150 (90.67%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+LTK+Q+DY+S+  +GPYKP+HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKPVHYRY 485
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.491e-71
Identity = 128/150 (85.33%), Postives = 135/150 (90.00%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.491e-71
Identity = 128/150 (85.33%), Postives = 135/150 (90.00%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.491e-71
Identity = 128/150 (85.33%), Postives = 134/150 (89.33%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+ TGKYEKKVYVLPKHLDEKV           LT+LTK+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERKTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISVPIEGPYKPAHYRY 485
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.278e-70
Identity = 127/150 (84.67%), Postives = 135/150 (90.00%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MKKMKNNAIVCNIGHFDNEIDMLGLET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKPFHYRY 485
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 4.855e-70
Identity = 127/150 (84.67%), Postives = 134/150 (89.33%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            MKKMKNNAIVCNIGHFDNEIDM GLETYPGVKRITIKPQTDRWVFPET SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ+ELWKEK++GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MKKMKNNAIVCNIGHFDNEIDMHGLETYPGVKRITIKPQTDRWVFPETKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQIELWKEKTSGKYEKKVYVLPKHLDEKVAALHLGQLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.845e-69
Identity = 125/150 (83.33%), Postives = 133/150 (88.67%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP+T  GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGRGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_SOLLC (Adenosylhomocysteinase OS=Solanum lycopersicum GN=SAHH PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.368e-69
Identity = 125/150 (83.33%), Postives = 133/150 (88.67%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M+KMKNNAIVCNIGHFDNEIDM GLET+PGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+S+GKYEKKVYVLPKHLDEKV           LT+LTK+QADYI V  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMHGLETFPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERSSGKYEKKVYVLPKHLDEKVAALHLGKFGAKLTKLTKDQADYIYVPVEGPYKPAHYRY 485
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 7.011e-69
Identity = 123/150 (82.00%), Postives = 134/150 (89.33%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKV           LT+L+K+Q+DY+S+  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 485
[Close]
BLAST of CV884444 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.012e-67
Identity = 123/150 (82.00%), Postives = 133/150 (88.67%), Query Frame = -1 
Query:  385 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 834
            M+KMKNNAIVCNIGHFDNEIDMLGLE YPGVKRITIKPQTDR+VFPETN+GIIVLAEGRLM LGCATGHPSFVMSCSFTNQVIAQLELW E+++GKYEKKVYVLPKHLDEKV           LT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLENYPGVKRITIKPQTDRFVFPETNTGIIVLAEGRLMKLGCATGHPSFVMSCSFTNQVIAQLELWNERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
The following BLAST results are available for this feature:
BLAST of CV884444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH2_ARATH5.736e-7184.00Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_TOBAC7.491e-7185.33Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY7.491e-7185.33Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_CATRO7.491e-7185.33Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_LUPLU1.278e-7084.67Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_MEDSA4.855e-7084.67Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_PETCR1.845e-6983.33Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_SOLLC5.368e-6983.33Adenosylhomocysteinase OS=Solanum lycopersicum GN=... [more]
SAHH1_ARATH7.011e-6982.00Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_MESCR1.012e-6782.00Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003E03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884444 ID=CV884444; Name=CV884444; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTTTATAATGATTTTTCATTTAGATAAGAAACTGGGAA
AAAGATTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAA
CAAGATGCAGCAAAGCAAGCAAAACTTAAAACTGCACCAAATACAAAATA
ATCCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCA
ATCAACGGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAA
CACACACTACTACGAAATTTAAACCTAACATCCTACTACAGATCATCATT
GAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTC
ACTCTTCTTCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGA
GGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTT
GGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAA
CCTTTTCATCGAGGTGCTTGGGCAGAACGTACACCTTCTTCTCGTACTTG
CCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGGTTGGT
GAAGGAGCAGGACATCACAAAGCTGGGGTGTCCAGTGGCACATCCCAAGT
TCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCCGGG
AAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGG
GTAGGTCTCAAGACCGAGCATATCAATTTCATTATCAAAGTGACCAATGT
TGCAAACAATTGCATTGTTCTTCATCTTCTTCAT
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