EY665278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665278 vs. ExPASy Swiss-Prot
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.070e-46 Identity = 77/103 (74.76%), Postives = 95/103 (92.23%), Query Frame = 3 Query: 72 MVSWNSVPLEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSPAVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLT 380 M SWNS+PLEI+Y+++GWI+F +WS+SFYPQ+ILNFRR+SVVGLNFDFV+LNLTKHSSYMIYNV L+FSP +Q+QYF YG +MIPVAANDVAFS+HAV++T Sbjct: 1 MASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYMIYNVCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMT 103 HSP 2 Score: 30.8018 bits (68), Expect = 2.070e-46 Identity = 15/31 (48.39%), Postives = 24/31 (77.42%), Query Frame = 1 Query: 385 ITLFQNCIYERGVQKVSKISMANGLLLIGLG 477 +TLFQ IYERG QKVS++++ G++++ G Sbjct: 105 VTLFQIFIYERGPQKVSRLAI--GIVVVVWG 133 HSP 3 Score: 21.9422 bits (45), Expect = 2.070e-46 Identity = 8/27 (29.63%), Postives = 13/27 (48.15%), Query Frame = 2 Query: 479 ATVCIFEEMQSHSWF*DIRLYKKYSNF 559 A +C F + +HSW I ++ F Sbjct: 135 AAICFFIALPTHSWLWLISIFNSIQVF 161
BLAST of EY665278 vs. ExPASy Swiss-Prot
Match: CTNS_HUMAN (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.692e-25 Identity = 54/99 (54.55%), Postives = 76/99 (76.77%), Query Frame = 3 Query: 87 SVPLEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSPAVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTI 383 S + I QV+GWI FVAWS+SFYPQVI+N+RRKSV+GL+FDFV LNLT +Y ++N+ L + P +++Q+ KY + + PV +NDV FS+HAV+LT+ Sbjct: 120 SSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGLLWVPYIKEQFLLKY-PNGVNPVNSNDVFFSLHAVVLTL 217 HSP 2 Score: 24.6386 bits (52), Expect = 1.692e-25 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 385 ITLFQNCIYERGVQKVS 435 I + Q C+YERG Q+VS Sbjct: 218 IIIVQCCLYERGGQRVS 234
BLAST of EY665278 vs. ExPASy Swiss-Prot
Match: CTNS_BOVIN (Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.519e-24 Identity = 55/96 (57.29%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 96 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSPAVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTI 383 + I QV+GWI FVAWSVSFYPQVI N+RRKSVVGL+FDFV+LNL +Y ++N+ LF+ P++++Q+ KY + + PV +NDV FS+HAV LT+ Sbjct: 123 VSIINQVIGWIYFVAWSVSFYPQVITNWRRKSVVGLSFDFVVLNLMGFVAYSVFNIGLFWVPSIKEQFLLKY-PNGVNPVDSNDVFFSLHAVALTL 217
BLAST of EY665278 vs. ExPASy Swiss-Prot
Match: CTNS_MOUSE (Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.767e-24 Identity = 51/96 (53.12%), Postives = 72/96 (75.00%), Query Frame = 3 Query: 96 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSPAVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTI 383 + I QV+GWI F+AWSVSFYPQVI N+RRKSV+GL+FDF+ LNLT +Y ++N+ L + P +Q+++ KY + + PV +ND FS+HAV LT+ Sbjct: 123 VSIINQVIGWIYFMAWSVSFYPQVIQNWRRKSVIGLSFDFLALNLTGFVAYSVFNIGLLWVPYIQEEFLLKY-PNGVNPVDSNDAFFSLHAVALTL 217 HSP 2 Score: 25.409 bits (54), Expect = 6.767e-24 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 385 ITLFQNCIYERGVQKVS 435 I + Q C+YERG Q+VS Sbjct: 218 IVILQCCLYERGNQRVS 234
BLAST of EY665278 vs. ExPASy Swiss-Prot
Match: CTNS_DICDI (Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 6.204e-23 Identity = 48/95 (50.53%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 96 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSPAVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLT 380 L I ++GWI F WS+SFYPQVILNFR+K+V+GL+FDF+L N+T ++ Y ++N VL+F V+ +Y+ KYG IPV +D+AF++H +LT Sbjct: 4 LSIISIIIGWIYFACWSLSFYPQVILNFRKKNVIGLSFDFLLFNITGYACYSVFNSVLYFDKLVKNEYYDKYG--PPIPVQQSDIAFAIHGFVLT 96
BLAST of EY665278 vs. ExPASy Swiss-Prot
Match: CTNS_CAEBR (Cystinosin homolog OS=Caenorhabditis briggsae GN=ctns-1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 4.161e-19 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 96 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSPAVQQQYFQKYGRDQMIPVAANDVAFSMHAVL 374 L I Q++GW F AWSVSFYPQ+ LNF+RKSVVGLNFDF+ LNL +Y ++N++++++ V+ Y + R PV NDV F++HA L Sbjct: 124 LAILIQIVGWTYFAAWSVSFYPQMYLNFKRKSVVGLNFDFLSLNLVGFGAYAMFNLLMYYNSHVKNIYSMENPRSPP-PVLLNDVVFAVHAFL 215
BLAST of EY665278 vs. ExPASy Swiss-Prot
Match: CTNS_CAEEL (Cystinosin homolog OS=Caenorhabditis elegans GN=ctns-1 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 7.098e-19 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 96 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSPAVQQQYFQKYGRDQMIPVAANDVAFSMHAVL 374 L I Q++GW F AWS+SFYPQ+ LNF+RKSVVGLNFDF+ LNL +Y I+N++++++ V+ +Y R PV NDV F++HA L Sbjct: 125 LAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSLNLVGFCAYAIFNLLMYYNSHVKNEYNIVNPRSPP-PVLLNDVVFAVHAFL 216
BLAST of EY665278 vs. ExPASy Swiss-Prot
Match: CTNS_DROME (Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 6.009e-18 Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 3 Query: 114 VLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSPAVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLT 380 + GW+ FVAWSVSFYPQ+ N+RRKSV GLNFDF+ LN+ + Y ++N L+F +Q +Y +Y + PV NDV FS+HA+ T Sbjct: 134 IFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFNCGLYFIEDLQNEYEVRYPLG-VNPVMLNDVVFSLHAMFAT 221 The following BLAST results are available for this feature:
BLAST of EY665278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665278 ID=EY665278; Name=EY665278; organism=Citrus sinensis; type=EST; length=1046bpback to top |