EY665264

Overview
NameEY665264
Unique NameEY665264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665264_ssr960 microsatellite EY665264_ssr960:960..971. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.079e-46
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHP
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76

HSP 2 Score: 44.2838 bits (103), Expect = 2.079e-46
Identity = 28/42 (66.67%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+SNGSICLDIL E   S AL   KVLLSI    L DPNP
Sbjct:   76 PNINSNGSICLDILKEQ-WSPALTISKVLLSI-CSLLTDPNP 115
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.710e-46
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHP
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76

HSP 2 Score: 43.8986 bits (102), Expect = 2.710e-46
Identity = 27/42 (64.29%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PN++SNGSICLDIL E   S AL   KVLLSI    L DPNP
Sbjct:   76 PNVNSNGSICLDILKEQ-WSPALTISKVLLSI-CSLLTDPNP 115
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.710e-46
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPS+SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76

HSP 2 Score: 44.2838 bits (103), Expect = 2.710e-46
Identity = 28/42 (66.67%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+SNGSICLDIL E   S AL   KVLLSI    L DPNP
Sbjct:   76 PNINSNGSICLDILKEQ-WSPALTISKVLLSI-CSLLTDPNP 115
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 5.999e-46
Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHP
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76

HSP 2 Score: 44.2838 bits (103), Expect = 5.999e-46
Identity = 28/42 (66.67%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+SNGSICLDIL E   S AL   KVLLSI    L DPNP
Sbjct:   76 PNINSNGSICLDILKEQ-WSPALTISKVLLSI-CSLLTDPNP 115
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.328e-45
Identity = 73/76 (96.05%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHP
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 76

HSP 2 Score: 44.2838 bits (103), Expect = 1.328e-45
Identity = 28/42 (66.67%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+SNGSICLDIL E   S AL   KVLLSI    L DPNP
Sbjct:   76 PNINSNGSICLDILKEQ-WSPALTISKVLLSI-CSLLTDPNP 115
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 2.035e-43
Identity = 68/76 (89.47%), Postives = 75/76 (98.68%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGP +SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+HP
Sbjct:    1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHP 76

HSP 2 Score: 44.2838 bits (103), Expect = 2.035e-43
Identity = 28/42 (66.67%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+SNGSICLDIL E   S AL   KVLLSI    L DPNP
Sbjct:   76 PNINSNGSICLDILKEQ-WSPALTISKVLLSI-CSLLTDPNP 115
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.113e-41
Identity = 65/76 (85.53%), Postives = 71/76 (93.42%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MASKRI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP+DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+HP
Sbjct:    1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHP 76

HSP 2 Score: 43.8986 bits (102), Expect = 3.113e-41
Identity = 28/42 (66.67%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+SNGSICLDIL E   S AL   KVLLSI    L DPNP
Sbjct:   76 PNINSNGSICLDILKEQ-WSPALTVSKVLLSI-CSLLTDPNP 115
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.286e-41
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MA++RILKELK+LQ+DPP SCSAGP  EDMFHWQATIMGP++SPY+GGVFLV IHFPPDYPFKPPKV FRTKVFHP
Sbjct:    1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHP 76

HSP 2 Score: 42.3578 bits (98), Expect = 5.286e-41
Identity = 26/42 (61.90%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+SNG+ICLDIL +   S AL   KVLLSI    L DPNP
Sbjct:   76 PNINSNGNICLDIL-KDQWSPALTISKVLLSI-CSLLTDPNP 115
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.946e-38
Identity = 59/76 (77.63%), Postives = 66/76 (86.84%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MA KRI KEL DLQ+DPP  CSAGPV +D+FHWQATIMGP+DSPY GGVF +TIHFP DYPFKPPKVAF TK++HP
Sbjct:    1 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHP 76

HSP 2 Score: 43.5134 bits (101), Expect = 3.946e-38
Identity = 27/42 (64.29%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+SNGSICLDIL  +  S AL   KVLLSI    L DPNP
Sbjct:   76 PNINSNGSICLDIL-RSQWSPALTVSKVLLSI-CSLLCDPNP 115
[Close]
BLAST of EY665264 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.481e-37
Identity = 58/76 (76.32%), Postives = 65/76 (85.53%), Query Frame = 1 
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP 405
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP+DSPY GGVF +TIHFP DYPFKPPKVAF T+++HP
Sbjct:    1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 76

HSP 2 Score: 43.8986 bits (102), Expect = 1.481e-37
Identity = 27/42 (64.29%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  404 PNIHSNGSICLDIL*ETVESSALPFQKVLLSIWLPCLMDPNP 529
            PNI+SNGSICLDIL  +  S AL   KVLLSI    L DPNP
Sbjct:   76 PNINSNGSICLDIL-RSQWSPALTISKVLLSI-CSLLCDPNP 115
The following BLAST results are available for this feature:
BLAST of EY665264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
UBC9_ARATH2.079e-4698.68SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC28_ARATH2.710e-4698.68Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC10_ARATH2.710e-4698.68Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC4_SOLLC5.999e-4697.37Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC8_ARATH1.328e-4596.05Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC11_ARATH2.035e-4389.47Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC30_ARATH3.113e-4185.53Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH5.286e-4184.21Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UB2D4_HUMAN3.946e-3877.63Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens... [more]
UB2D3_RAT1.481e-3776.32Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665264 ID=EY665264; Name=EY665264; organism=Citrus sinensis; type=EST; length=1023bp
AGACAACGAAGCAAGGGGTTGATAGAGGAGCGAGGCGGGGGCGGCTTGAC
GACCTAGATCTGCTTCACCGTTTCGCTTTCTCGACGCTATCGCTCTCCGA
TCCTGTTCTCTGCCGCGCAAGTTTCGCAGGTCTTAAGGTTCGTTGTAGTT
TCAATTTTAATAATCCCCTGAAGAGTCATGGCTTCAAAGCGTATTTTGAA
GGAACTCAAGGATTTGCAGAAGGATCCTCCCACGTCTTGCAGCGCTGGCC
CTGTGGCTGAAGACATGTTCCACTGGCAAGCAACAATTATGGGCCCTTCT
GATAGCCCATATGCAGGAGGTGTATTTTTAGTTACCATTCATTTTCCTCC
TGATTATCCTTTCAAGCCCCCAAAGGTTGCTTTTAGGACCAAGGTCTTCC
ACCCCAAACATTCACAGCAATGGAAGCATCTGTCTTGATATCCTTTAAGA
AACAGTGGAGTCCAGCGCTTTACCATTTCAAAAGGTCCTGCTCTCTATCT
GGCTCCCTTGCTTAATGGATCCAAATCCTTGAAGAACCCTCCTGGTACCG
AAAAATGGCCCAAATGGAACAAAGTCCCAAAAAAGGCCAAAAAATGAATT
CCCCGGGCAGGAAACTGGGAAACAAAAAATATTGCCCAGGGAATAGAAGG
TTTGTTAGGAAATATGGGCAAAAAAAAAGGAACAAATTTATTTTAAAAAA
TTGTTGGGGGGGGGTTGCACATAATATATTTTTCTTTATATTTTGGTTTT
TGGGGAGAGGGGACAAAAGTGTGGGGGTTTTTAAAAAAAGGGGGTGGGGG
GGAAGATTCCACAGGGGGGGGGGGGAAAACGTTTATAATATGTTAAAGAG
CGATGAGAATGAGTGGGGGGGAGCGTTTTAAAAGAGCCACACATTTAAGA
GGGAGGAAAGAGGAGATATAAAAATGGAGTGATAATTCAAAAAAACTAAT
GTGGTATGTTAATAATAATAATTTATAAATAAAAAAAATATAAAAATAAA
AAAGAAAACAGAGGGAAGGGGAG
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