CV884354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884354 vs. ExPASy Swiss-Prot
Match: GLGB_MAIZE (1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.700e-17 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = -1 Query: 408 DYRVGCLKPGKYKIALDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYA 593 DYR+GC KPG YK+ LDSD LFGG+ R+ H AE+F+++ +D+RP+SF VY PSRT VVYA Sbjct: 735 DYRIGCRKPGVYKVVLDSDAGLFGGFSRIHHAAEHFTADCSHDNRPYSFSVYTPSRTCVVYA 796
BLAST of CV884354 vs. ExPASy Swiss-Prot
Match: GLGB_MOUSE (1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13 Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = -1 Query: 399 DYRVGCLKPGKYKIALDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 593 DYRVG PGK+KI LDSD +GG++RLDHN YF+ ++ RP+S LVY PSR A++ D Sbjct: 635 DYRVGTATPGKFKIVLDSDAAEYGGHQRLDHNTNYFAEAFEHNGRPYSLLVYIPSRVALILQNVD 699
BLAST of CV884354 vs. ExPASy Swiss-Prot
Match: GLGB_HUMAN (1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.453e-12 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = -1 Query: 399 DYRVGCLKPGKYKIALDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 593 DYRVG PGK+KI LDSD +GG++RLDH+ ++FS ++ RP+S LVY PSR A++ D Sbjct: 635 DYRVGTALPGKFKIVLDSDAAEYGGHQRLDHSTDFFSEAFEHNGRPYSLLVYIPSRVALILQNVD 699
BLAST of CV884354 vs. ExPASy Swiss-Prot
Match: GLGB_HORSE (1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.453e-12 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = -1 Query: 399 DYRVGCLKPGKYKIALDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 593 +YRVG PGK+KI LDSD +GG++RLDHN ++FS +++RP S LVY PSR A++ D Sbjct: 632 NYRVGTTLPGKFKIVLDSDAAEYGGHQRLDHNTDFFSEPYEHNERPSSLLVYIPSRVALILQNVD 696
BLAST of CV884354 vs. ExPASy Swiss-Prot
Match: GLGB_ORYSJ (1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.417e-12 Identity = 34/78 (43.59%), Postives = 51/78 (65.38%), Query Frame = -1 Query: 381 YRVGCLKPGKYKIALDSDYPLFGGYKRLDHNAEYFSS--------EGWYDDRPHSFLVYAPSRTAVVYALADEEEQPL 590 Y+VGC PGKY++ALDSD +FGG+ R+ H+ ++F+S E +++RP+SF V +P RT V Y DE+ + L Sbjct: 688 YKVGCDLPGKYRVALDSDALVFGGHGRVGHDVDHFTSPEGMPGVPETNFNNRPNSFKVLSPPRTCVAYYRVDEDREEL 765
BLAST of CV884354 vs. ExPASy Swiss-Prot
Match: GLGB_FELCA (1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11 Identity = 30/65 (46.15%), Postives = 44/65 (67.69%), Query Frame = -1 Query: 399 DYRVGCLKPGKYKIALDSDYPLFGGYKRLDHNAEYFSSEGWYDDRPHSFLVYAPSRTAVVYALAD 593 DYRVG PGK++I LD+D +GG++RLDH+ E+FS +++RP S LVY P+R ++ D Sbjct: 632 DYRVGTTLPGKFRIVLDTDAAEYGGHQRLDHSTEFFSQPFKHNERPCSLLVYIPNRVGLILQNVD 696 The following BLAST results are available for this feature:
BLAST of CV884354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884354 ID=CV884354; Name=CV884354; organism=Citrus sinensis; type=EST; length=593bpback to top |