CV884339

Overview
NameCV884339
Unique NameCV884339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.774e-41
Identity = 97/218 (44.50%), Postives = 132/218 (60.55%), Query Frame = 3
Query:  165 HQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAAL--KKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSAT----KLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            H+ C ++ ++ SC+AM+SE T +N     N   LL  FL K+T  IQ+  E AN    RIN+P+ + AL DC EL++LS +R+ DS++ L  +   T S+ED H WLSGVLTNHVTCLDGL+  +T     LME  L EL+ RA  SLAI V + P  +NVI+         FP+WVT+ DR LL+ +             DGSG+Y+T+ EAVA+ P
Sbjct:   45 HKICDQSVNKESCLAMISEVTGLNMADHRN---LLKSFLEKTTPRIQKAFETANDASRRINNPQERTALLDCAELMDLSKERVVDSISILFHQNLTTRSHEDLHVWLSGVLTNHVTCLDGLEEGSTDYIKTLMESHLNELILRARTSLAIFVTLFPAKSNVIEPV----TGNFPTWVTAGDRRLLQ-TLGKDIEPDIVVAKDGSGDYETLNEAVAAIP 254          
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 3.045e-34
Identity = 93/213 (43.66%), Postives = 127/213 (59.62%), Query Frame = 3
Query:  174 CAKAQDQSSCIAMVSETTSINATTKMNE-VDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEI-QFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            C  AQD   C++ VS+  S    T  ++ + +L  FL  S   +   I V   +K++IN  R Q ALTDC+ELL+LSVD + DS+AA+ KR  S + +A +WLSGVLTNHVTCLD LD S TK M     L EL++RA  +LA+L +++  N  V     LR  + + PSWV+SRDR L+  S             DG+G Y+T+ EAVA+AP
Sbjct:   54 CKTAQDSQLCLSYVSDLISNEIVTSDSDGLSILKKFLVYSVHQMNNAIPVVRKIKNQINDIREQGALTDCLELLDLSVDLVCDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLDELISRAKVALAMLASVTTPNDEV-----LRPGLGKMPSWVSSRDRKLME-SSGKDIGANAVVAKDGTGKYRTLAEAVAAAP 259          
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33
Identity = 91/213 (42.72%), Postives = 129/213 (60.56%), Query Frame = 3
Query:  174 CAKAQDQSSCIAMVSETTSIN-ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEI-QFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            C  AQD   C++ VS+  S    TT  + + +L+ FL      +   I V + +K++IN  R + ALTDC+ELL+ SVD ++DS+AA+ KR  S + +A +WLSGVLTNHVTCLD LD S TK M     L EL++RA  +LA+L +++  N +V     LR  + + PSWV+SRDR L+  S             DG+G Y+T+ EAVA+AP
Sbjct:   54 CKTAQDSQLCLSYVSDLMSNEIVTTDSDGLSILMKFLVNYVHQMNNAIPVVSKMKNQINDIRQEGALTDCLELLDQSVDLVSDSIAAIDKRTHSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLDELISRAKVALAMLASVTTPNDDV-----LRPGLGKMPSWVSSRDRKLME-SSGKDIGANAVVAKDGTGKYRTLAEAVAAAP 259          
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.743e-33
Identity = 86/210 (40.95%), Postives = 123/210 (58.57%), Query Frame = 3
Query:  174 CAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLMEPRLV-ELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            C  AQD   C++ VSE      TT+ + V +L  FL K    +   I V   +K++IN  R Q ALTDC+ELL+ SVD ++DS+AA+ KR  S + +A +WLSGVLTNHVTCLD L   +       ++ EL+ RA  +LA+L +++  N  V++Q   +     P WV+SRDR L+  S             DG+G+Y+T+ EAVA+AP
Sbjct:   54 CKTAQDSQLCLSYVSEIV----TTESDGVTVLKKFLVKYVHQMNNAIPVVRKIKNQINDIRQQGALTDCLELLDQSVDLVSDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELTSFSLSTKNGTVLDELITRAKVALAMLASVTTPNDEVLRQGLGK----MPYWVSSRDRKLME-SSGKDIIANRVVAQDGTGDYQTLAEAVAAAP 254          
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33
Identity = 93/272 (34.19%), Postives = 145/272 (53.31%), Query Frame = 3
Query:   12 DRPLLLKLHTPKASKRKXXXXXXXXXXXMCSATFVAIHCIKAINSNNHWSL---HQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALK--KRRTSSNEDAHAWLSGVLTNHVTCLDGLDG---SATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPS-QXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            ++PLL K   PK  K K           + S  F     I    +NN  SL    Q C  A DQ SC A++SE T+++ + K+N +DLL +FL  S   ++ T+ + +  + R N  R +A   DC E++++S DR+  SM  L+       S  + H WLS VLTN++TCL+ +     ++ ++++P+L +L++RA  +LAI V++ P   ++      R    FPSW+T+ DR LL  S +            DG+G +KTV EAVA+AP
Sbjct:    5 NQPLLSK---PKYLKHKNLCLVLSFVAILGSVAFFTAQLISVNTNNNDDSLLTTSQICHGAHDQDSCQALLSEFTTLSLS-KLNRLDLLHVFLKNSVWRLESTMTMVSEARIRSNGVRDKAGFADCEEMMDVSKDRMMSSMEELRGGNYNLESYSNVHTWLSSVLTNYMTCLESISDVSVNSKQIVKPQLEDLVSRARVALAIFVSVLPARDDLKMIISNR----FPSWLTALDRKLLESSPKTLKVTANVVVAKDGTGKFKTVNEAVAAAP 268          
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31
Identity = 87/212 (41.04%), Postives = 125/212 (58.96%), Query Frame = 3
Query:  174 CAKAQDQSSCIAMVSETTSIN-ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            C  AQD   C++ VS+  S    TT+ +   +L+ FL      +   I V   +K++IN  R   ALTDC+ELL+ SVD  +DS+AA+ KR  S + +A +WLSGVLTNHVTCLD LD S TK M     L EL++RA  +LA+L +++  + +V    ++    + PSWV+S DR L+  S             DG+G+Y+T+ EAVA+AP
Sbjct:   50 CKTAQDSQLCLSYVSDLISNEIVTTESDGHSILMKFLVNYVHQMNNAIPVVRKMKNQINDIRQHGALTDCLELLDQSVDFASDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLEELISRAKVALAMLASLTTQDEDV----FMTVLGKMPSWVSSMDRKLME-SSGKDIIANAVVAQDGTGDYQTLAEAVAAAP 255          
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 62/215 (28.84%), Postives = 106/215 (49.30%), Query Frame = 3
Query:  189 DQSSCIAMVSET-TSINATTKMNEVDLLLIFLSKSTSNIQET-IEVANHVKHRINSPRGQAALTDCV----ELLELSVDRITDSMAALKKRR---TSSNEDAHAWLSGVLTNHVTCLDGL-DGSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRL-LLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            D+ SC   + E  T+ ++ +++   DLL+I L  S   I    I V    K        +  L +      E++E + DR+  S+  L         S E+ H WLSGVLT+++TC+D + DG+  + +EP+L +L+++A  +LA+ ++ISP +   +           PSW++  D+  L   ++            DG+G Y TV  A+A+AP
Sbjct:   27 DKHSCQNFLLELKTASSSLSEIRRRDLLIIVLKNSVRKIDMAMIGVMEDTKQHEEMENDKLCLKEDTNLFEEMMESAKDRMIRSVEELLGGEFPYLGSYENIHTWLSGVLTSYITCIDEIGDGAYKRRVEPQLQDLISKAKVALALFISISPRDNTELNSVVPNS----PSWLSHVDKKDLYLNAEALKKIADVVVAKDGTGKYNTVNAAIAAAP 237          
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12
Identity = 67/240 (27.92%), Postives = 107/240 (44.58%), Query Frame = 3
Query:  159 SLHQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAAL----KKRRTSSN--EDAHAWLSGVLTNHVTCLDGLD-------GSATKLMEPRLVELMARA----ANSLAIL---------VAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            SL   C+  +   SCI+ +S+  S N T       L L  +     +I +  E    +       R ++AL  C +L+E ++DR+ D+++A+    KK+  SS+  ED   WLS  +T+H TC D LD         A   +   L   M+R+    +NSLAI+         + I  +    +  ++ ++ + F  W  +R RLL    Q            DG+G+  TV EAVA  P
Sbjct:   72 SLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPE---KLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKW--ARRRLL----QTAGLKPDVTVAGDGTGDVLTVNEAVAKVP 302          
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12
Identity = 62/216 (28.70%), Postives = 107/216 (49.54%), Query Frame = 3
Query:  189 DQSSCIAMVSETTSINAT-TKMNEVDLLLIFLSKSTSNIQET-IEVANHVKHRINSPRGQAALTDCV----ELLELSVDRITDSMAAL---KKRRTSSNEDAHAWLSGVLTNHVTCLDGL-DGSATKLMEPRLVELMARAANSLAILVAISPY-NTNVIQQYYLRKEIQFPSWVTSRDRL-LLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            D+ SC   + E  + +++ +++   DLL+I L  S   I    I V +  K           + +      E++E + DR+  S+  L   +     S E+ H WLS VLT+++TC+D + +G+  + +EP+L +L++RA  +LA+ ++ISP  NT +I           PSW+   D+  L   ++            DG+G Y TV  A+A+AP
Sbjct:   27 DKQSCQNFLLELKAGSSSLSEIRRRDLLIIVLKNSVRRIDMVMIGVMDDTKQHEEMENDLLGVKEDTKLFEEMMESTKDRMIRSVEELLGGEFPNRGSYENVHTWLSSVLTSYITCIDEIGEGAYKRRVEPKLEDLISRARIALALFISISPRDNTELISVI-----PNSPSWLFHVDKKDLYLNAEALKKIADVVVAKDGTGKYSTVNAAIAAAP 237          
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.179e-11
Identity = 61/246 (24.80%), Postives = 112/246 (45.53%), Query Frame = 3
Query:  129 IKAINSNNHWSLHQFCAKAQDQSSCIAMVSETTSIN--ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAAL-----KKRRTSSNEDAHAWLSGVLTNHVTCLDGL-----DGSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYL------RKEIQ----FPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800
            I AI+S+ H  +   C+       C + +   +  +   T++ + ++L L    K+       ++     +  + +PR + AL DC+E ++ ++D +  ++  L     KK      ED    +S  +TN  TCLDG      D    K++      +    +N+LA++  ++  +T++  +  L      RK ++    +P W+++ DR LL+ S             DGSG+YKTV EAV  AP
Sbjct:   55 IMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGL-TPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMT--DTDIANEMKLSAPANNRKLVEDNGEWPEWLSAGDRRLLQSSTVTPDVVVAA---DGSGDYKTVSEAVRKAP 294          
The following BLAST results are available for this feature:
BLAST of CV884339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PME1_FICAW9.774e-4144.50Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME21_SOLLC3.045e-3443.66Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME22_SOLLC1.157e-3342.72Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME3_SOLLC5.743e-3340.95Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME18_ARATH9.796e-3334.19Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME1_SOLLC1.415e-3141.04Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME42_ARATH1.203e-1428.84Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME1_ARATH1.126e-1227.92Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME19_ARATH1.126e-1228.70Probable pectinesterase/pectinesterase inhibitor 1... [more]
PMEU1_SOLLC6.179e-1124.80Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_002G07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_002_T7_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884339 ID=CV884339; Name=CV884339; organism=Citrus sinensis; type=EST; length=800bp
ATGGCTACATCGACCGGCCTCTGCTACTAAAGCTACACACGCCAAAAGCC
TCTAAACGTAAAATTCTCCTTCTAATTCTGTCCGTGGTTTCCGTGATGTG
CTCGGCTACATTTGTTGCCATACACTGTATCAAAGCTATCAACTCAAACA
ATCATTGGTCACTGCATCAATTTTGTGCTAAAGCCCAGGACCAGTCATCG
TGCATAGCCATGGTTTCAGAAACAACCTCAATTAATGCAACCACAAAAAT
GAACGAGGTTGATCTGTTACTTATCTTCTTGAGCAAGTCCACATCAAACA
TACAAGAAACTATCGAGGTGGCCAATCACGTCAAGCATCGGATCAACAGC
CCTAGAGGACAAGCGGCTTTGACTGATTGTGTGGAGTTGTTGGAGTTATC
CGTCGATAGAATTACAGATTCCATGGCGGCTCTTAAAAAAAGGAGGACCA
GTTCCAACGAAGATGCGCATGCATGGCTAAGTGGCGTTCTTACTAACCAC
GTCACGTGCTTGGACGGCCTAGATGGCTCAGCTACGAAGTTGATGGAGCC
AAGGCTCGTTGAGTTGATGGCAAGAGCTGCAAATTCTCTAGCCATTTTAG
TGGCAATTTCCCCATACAACACCAACGTCATCCAGCAATATTACTTGAGA
AAAGAAATTCAATTTCCGTCGTGGGTGACAAGCAGGGACCGGTTGCTTTT
ACGGCCTTCTCAGGCCGAAGCAGCTAAGGCCAACGTTGTGGTGGCTAAGG
ATGGAAGTGGAAACTATAAGACTGTGAAAGAGGCCGTGGCATCAGCACCA
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