CV884339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.774e-41 Identity = 97/218 (44.50%), Postives = 132/218 (60.55%), Query Frame = 3 Query: 165 HQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAAL--KKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSAT----KLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 H+ C ++ ++ SC+AM+SE T +N N LL FL K+T IQ+ E AN RIN+P+ + AL DC EL++LS +R+ DS++ L + T S+ED H WLSGVLTNHVTCLDGL+ +T LME L EL+ RA SLAI V + P +NVI+ FP+WVT+ DR LL+ + DGSG+Y+T+ EAVA+ P Sbjct: 45 HKICDQSVNKESCLAMISEVTGLNMADHRN---LLKSFLEKTTPRIQKAFETANDASRRINNPQERTALLDCAELMDLSKERVVDSISILFHQNLTTRSHEDLHVWLSGVLTNHVTCLDGLEEGSTDYIKTLMESHLNELILRARTSLAIFVTLFPAKSNVIEPV----TGNFPTWVTAGDRRLLQ-TLGKDIEPDIVVAKDGSGDYETLNEAVAAIP 254
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.045e-34 Identity = 93/213 (43.66%), Postives = 127/213 (59.62%), Query Frame = 3 Query: 174 CAKAQDQSSCIAMVSETTSINATTKMNE-VDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEI-QFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 C AQD C++ VS+ S T ++ + +L FL S + I V +K++IN R Q ALTDC+ELL+LSVD + DS+AA+ KR S + +A +WLSGVLTNHVTCLD LD S TK M L EL++RA +LA+L +++ N V LR + + PSWV+SRDR L+ S DG+G Y+T+ EAVA+AP Sbjct: 54 CKTAQDSQLCLSYVSDLISNEIVTSDSDGLSILKKFLVYSVHQMNNAIPVVRKIKNQINDIREQGALTDCLELLDLSVDLVCDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLDELISRAKVALAMLASVTTPNDEV-----LRPGLGKMPSWVSSRDRKLME-SSGKDIGANAVVAKDGTGKYRTLAEAVAAAP 259
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.157e-33 Identity = 91/213 (42.72%), Postives = 129/213 (60.56%), Query Frame = 3 Query: 174 CAKAQDQSSCIAMVSETTSIN-ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEI-QFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 C AQD C++ VS+ S TT + + +L+ FL + I V + +K++IN R + ALTDC+ELL+ SVD ++DS+AA+ KR S + +A +WLSGVLTNHVTCLD LD S TK M L EL++RA +LA+L +++ N +V LR + + PSWV+SRDR L+ S DG+G Y+T+ EAVA+AP Sbjct: 54 CKTAQDSQLCLSYVSDLMSNEIVTTDSDGLSILMKFLVNYVHQMNNAIPVVSKMKNQINDIRQEGALTDCLELLDQSVDLVSDSIAAIDKRTHSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLDELISRAKVALAMLASVTTPNDDV-----LRPGLGKMPSWVSSRDRKLME-SSGKDIGANAVVAKDGTGKYRTLAEAVAAAP 259
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.743e-33 Identity = 86/210 (40.95%), Postives = 123/210 (58.57%), Query Frame = 3 Query: 174 CAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLMEPRLV-ELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 C AQD C++ VSE TT+ + V +L FL K + I V +K++IN R Q ALTDC+ELL+ SVD ++DS+AA+ KR S + +A +WLSGVLTNHVTCLD L + ++ EL+ RA +LA+L +++ N V++Q + P WV+SRDR L+ S DG+G+Y+T+ EAVA+AP Sbjct: 54 CKTAQDSQLCLSYVSEIV----TTESDGVTVLKKFLVKYVHQMNNAIPVVRKIKNQINDIRQQGALTDCLELLDQSVDLVSDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELTSFSLSTKNGTVLDELITRAKVALAMLASVTTPNDEVLRQGLGK----MPYWVSSRDRKLME-SSGKDIIANRVVAQDGTGDYQTLAEAVAAAP 254
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33 Identity = 93/272 (34.19%), Postives = 145/272 (53.31%), Query Frame = 3 Query: 12 DRPLLLKLHTPKASKRKXXXXXXXXXXXMCSATFVAIHCIKAINSNNHWSL---HQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALK--KRRTSSNEDAHAWLSGVLTNHVTCLDGLDG---SATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPS-QXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 ++PLL K PK K K + S F I +NN SL Q C A DQ SC A++SE T+++ + K+N +DLL +FL S ++ T+ + + + R N R +A DC E++++S DR+ SM L+ S + H WLS VLTN++TCL+ + ++ ++++P+L +L++RA +LAI V++ P ++ R FPSW+T+ DR LL S + DG+G +KTV EAVA+AP Sbjct: 5 NQPLLSK---PKYLKHKNLCLVLSFVAILGSVAFFTAQLISVNTNNNDDSLLTTSQICHGAHDQDSCQALLSEFTTLSLS-KLNRLDLLHVFLKNSVWRLESTMTMVSEARIRSNGVRDKAGFADCEEMMDVSKDRMMSSMEELRGGNYNLESYSNVHTWLSSVLTNYMTCLESISDVSVNSKQIVKPQLEDLVSRARVALAIFVSVLPARDDLKMIISNR----FPSWLTALDRKLLESSPKTLKVTANVVVAKDGTGKFKTVNEAVAAAP 268
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5) HSP 1 Score: 136.732 bits (343), Expect = 1.415e-31 Identity = 87/212 (41.04%), Postives = 125/212 (58.96%), Query Frame = 3 Query: 174 CAKAQDQSSCIAMVSETTSIN-ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAALKKRRTSSNEDAHAWLSGVLTNHVTCLDGLDGSATKLM--EPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 C AQD C++ VS+ S TT+ + +L+ FL + I V +K++IN R ALTDC+ELL+ SVD +DS+AA+ KR S + +A +WLSGVLTNHVTCLD LD S TK M L EL++RA +LA+L +++ + +V ++ + PSWV+S DR L+ S DG+G+Y+T+ EAVA+AP Sbjct: 50 CKTAQDSQLCLSYVSDLISNEIVTTESDGHSILMKFLVNYVHQMNNAIPVVRKMKNQINDIRQHGALTDCLELLDQSVDFASDSIAAIDKRSRSEHANAQSWLSGVLTNHVTCLDELD-SFTKAMINGTNLEELISRAKVALAMLASLTTQDEDV----FMTVLGKMPSWVSSMDRKLME-SSGKDIIANAVVAQDGTGDYQTLAEAVAAAP 255
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14 Identity = 62/215 (28.84%), Postives = 106/215 (49.30%), Query Frame = 3 Query: 189 DQSSCIAMVSET-TSINATTKMNEVDLLLIFLSKSTSNIQET-IEVANHVKHRINSPRGQAALTDCV----ELLELSVDRITDSMAALKKRR---TSSNEDAHAWLSGVLTNHVTCLDGL-DGSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYLRKEIQFPSWVTSRDRL-LLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 D+ SC + E T+ ++ +++ DLL+I L S I I V K + L + E++E + DR+ S+ L S E+ H WLSGVLT+++TC+D + DG+ + +EP+L +L+++A +LA+ ++ISP + + PSW++ D+ L ++ DG+G Y TV A+A+AP Sbjct: 27 DKHSCQNFLLELKTASSSLSEIRRRDLLIIVLKNSVRKIDMAMIGVMEDTKQHEEMENDKLCLKEDTNLFEEMMESAKDRMIRSVEELLGGEFPYLGSYENIHTWLSGVLTSYITCIDEIGDGAYKRRVEPQLQDLISKAKVALALFISISPRDNTELNSVVPNS----PSWLSHVDKKDLYLNAEALKKIADVVVAKDGTGKYNTVNAAIAAAP 237
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12 Identity = 67/240 (27.92%), Postives = 107/240 (44.58%), Query Frame = 3 Query: 159 SLHQFCAKAQDQSSCIAMVSETTSINATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAAL----KKRRTSSN--EDAHAWLSGVLTNHVTCLDGLD-------GSATKLMEPRLVELMARA----ANSLAIL---------VAISPYNTNVIQQYYLRKEIQFPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 SL C+ + SCI+ +S+ S N T L L + +I + E + R ++AL C +L+E ++DR+ D+++A+ KK+ SS+ ED WLS +T+H TC D LD A + L M+R+ +NSLAI+ + I + + ++ ++ + F W +R RLL Q DG+G+ TV EAVA P Sbjct: 72 SLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPE---KLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKW--ARRRLL----QTAGLKPDVTVAGDGTGDVLTVNEAVAKVP 302
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.126e-12 Identity = 62/216 (28.70%), Postives = 107/216 (49.54%), Query Frame = 3 Query: 189 DQSSCIAMVSETTSINAT-TKMNEVDLLLIFLSKSTSNIQET-IEVANHVKHRINSPRGQAALTDCV----ELLELSVDRITDSMAAL---KKRRTSSNEDAHAWLSGVLTNHVTCLDGL-DGSATKLMEPRLVELMARAANSLAILVAISPY-NTNVIQQYYLRKEIQFPSWVTSRDRL-LLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 D+ SC + E + +++ +++ DLL+I L S I I V + K + + E++E + DR+ S+ L + S E+ H WLS VLT+++TC+D + +G+ + +EP+L +L++RA +LA+ ++ISP NT +I PSW+ D+ L ++ DG+G Y TV A+A+AP Sbjct: 27 DKQSCQNFLLELKAGSSSLSEIRRRDLLIIVLKNSVRRIDMVMIGVMDDTKQHEEMENDLLGVKEDTKLFEEMMESTKDRMIRSVEELLGGEFPNRGSYENVHTWLSSVLTSYITCIDEIGEGAYKRRVEPKLEDLISRARIALALFISISPRDNTELISVI-----PNSPSWLFHVDKKDLYLNAEALKKIADVVVAKDGTGKYSTVNAAIAAAP 237
BLAST of CV884339 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.179e-11 Identity = 61/246 (24.80%), Postives = 112/246 (45.53%), Query Frame = 3 Query: 129 IKAINSNNHWSLHQFCAKAQDQSSCIAMVSETTSIN--ATTKMNEVDLLLIFLSKSTSNIQETIEVANHVKHRINSPRGQAALTDCVELLELSVDRITDSMAAL-----KKRRTSSNEDAHAWLSGVLTNHVTCLDGL-----DGSATKLMEPRLVELMARAANSLAILVAISPYNTNVIQQYYL------RKEIQ----FPSWVTSRDRLLLRPSQXXXXXXXXXXXXDGSGNYKTVKEAVASAP 800 I AI+S+ H + C+ C + + + + T++ + ++L L K+ ++ + + +PR + AL DC+E ++ ++D + ++ L KK ED +S +TN TCLDG D K++ + +N+LA++ ++ +T++ + L RK ++ +P W+++ DR LL+ S DGSG+YKTV EAV AP Sbjct: 55 IMAISSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGL-TPREKVALHDCLETMDETLDELHTAVEDLELYPNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMT--DTDIANEMKLSAPANNRKLVEDNGEWPEWLSAGDRRLLQSSTVTPDVVVAA---DGSGDYKTVSEAVRKAP 294 The following BLAST results are available for this feature:
BLAST of CV884339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884339 ID=CV884339; Name=CV884339; organism=Citrus sinensis; type=EST; length=800bpback to top |