EY665257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.500e-25 Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 2 Query: 35 GAG-IPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQASYPSDQLGTLS 355 G+G +P D P+ I AL++ L+NA+PEQQRT+LGE LYPLVEQ+E ++AAKVTGMLL+MD TEVLHLLESPEALK K EAM+VL VA A ++QL +L+ Sbjct: 523 GSGDVPPYDMGNNMPLTIGALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVA---AGGATEQLASLN 627
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.504e-17 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 2 Query: 74 PMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVL 298 P+ I+ L++ LA ASP++ +LG+ LYPLVEQ E AAKVTGMLL+MD E+LHLLESPEALK K +EA++VL Sbjct: 572 PLTISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVL 646
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.964e-17 Identity = 44/76 (57.89%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 77 MPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMI 304 +PI+ L+++LA+ASP + +LGE LYPLVE+ E AKVTGMLL+MD E+LHL+ESPEALK+K +EA++VL + Sbjct: 570 LPISKLTSSLASASPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLRL 645
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.192e-14 Identity = 41/87 (47.13%), Postives = 62/87 (71.26%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQASYPSDQ 340 P+TA S LA+A P++Q+ +LGE LYPL+ ++ A K+TGMLL++D++E+LH+LESPE+L +K EA+ VL ++ S S Q Sbjct: 541 PLTASS--LASAPPQEQKQMLGERLYPLIHEMHPTLAGKITGMLLEIDNSELLHMLESPESLHSKVEEAVAVLQAHQAKENSQKSAQ 625
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 4.528e-14 Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 32 MGAGIPRRDASVGQPMPITALST----ALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEV 295 M G R +VGQP P T + AL+ A P+QQ+ +LGE+LYP ++ + + A K+TGMLL+MD+TE+L LLE EAL+ K EA+ V Sbjct: 610 MRPGQGGRGQAVGQPGPETPVGVLTAQALSAAPPQQQKQMLGEALYPKIQATQPELAGKITGMLLEMDNTELLGLLEDDEALRAKVDEALSV 701
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.528e-14 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQAS 325 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLL++D++E+LH+LESPE+L++K EA+ VL ++A+ Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAA 623
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.528e-14 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQAS 325 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLL++D++E+LH+LESPE+L++K EA+ VL ++A+ Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAA 623
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 5.914e-14 Identity = 33/71 (46.48%), Postives = 55/71 (77.46%), Query Frame = 2 Query: 92 LSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMI 304 +++ LANA P++Q+ +LGE LYP++E + + A K+TGMLL+++++E+LH++E EALK K EA+ VL + Sbjct: 556 IASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.914e-14 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQAS 325 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLL++D++E+LH+LESPE+L++K EA+ VL ++A+ Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAA 623
BLAST of EY665257 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.914e-14 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 80 PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLDMDHTEVLHLLESPEALKTKSTEAMEVLMIVALRQAS 325 P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLL++D++E+LH+LESPE+L++K EA+ VL ++A+ Sbjct: 544 PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAA 623 The following BLAST results are available for this feature:
BLAST of EY665257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665257 ID=EY665257; Name=EY665257; organism=Citrus sinensis; type=EST; length=943bpback to top |