EY665255

Overview
NameEY665255
Unique NameEY665255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1011
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665255 vs. ExPASy Swiss-Prot
Match: PPL2_ARATH (PsbP-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=PPL2 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 4.099e-32
Identity = 81/182 (44.51%), Postives = 99/182 (54.40%), Query Frame = 3 
Query:    3 VSSLSLNW--VSTTLSKKLNVAYPNELTRSATAFSCQNFFTCPEDI-SSDEENKSKRRLLLMXXXXXXXXXXXXXXXFAQEIPKNYDAFVDRIDGYSYVYPSDWTEFEFTGHDSGFKDRYLQLQNVRVRFIPTDKKDVHDLGPMEEVVSNLARHVYGCPEIRLLNY*IWQRNPEKGKKLLPF 539
            VSSLS+     S T+S K  +  PN   ++    S        E        N  KRR  L+                A+EIPK+Y  FVDR DGYSY YPSDW EF+F  HDS FKDRYLQLQNVRVRFIPT+K D+H++GPMEEVV +L +H +  P      Y + +R  E GK    F
Sbjct:    3 VSSLSIRCGGFSPTISHKTEILCPNPSLKACCLLSSGGKADSSESTYQKGSGNNWKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKER-VEDGKNYYTF 183
The following BLAST results are available for this feature:
BLAST of EY665255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PPL2_ARATH4.099e-3244.51PsbP-like protein 2, chloroplastic OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665255 ID=EY665255; Name=EY665255; organism=Citrus sinensis; type=EST; length=1011bp
CAGTTTCATCACTCTCTTTGAACTGGGTTTCCACAACCCTGTCAAAGAAG
TTAAATGTGGCTTATCCAAATGAGTTAACTCGATCAGCTACTGCTTTCTC
TTGTCAAAACTTTTTCACATGCCCAGAAGATATCAGTTCCGATGAAGAAA
ACAAAAGCAAGAGGCGGCTGCTGCTGATGGGAGCTGGACTGCTTTCTGCG
AATTTACTTCCTGCAAGTCCATTGTTTGCTCAAGAGATTCCGAAAAATTA
TGATGCTTTTGTAGACCGTATTGATGGGTACTCATATGTTTATCCCTCGG
ATTGGACAGAATTTGAGTTCACAGGACATGATTCTGGATTCAAAGACAGA
TACTTGCAGTTGCAAAATGTTAGGGTGAGATTCATACCAACTGACAAAAA
GGATGTCCATGATTTGGGTCCTATGGAAGAGGTTGTTTCTAATCTGGCAA
GGCATGTGTATGGCTGCCCCGAAATCAGGTTGCTGAACTACTAGATATGG
CAGAGAAATCCCGAAAAGGGCAAAAAACTACTACCCTTTTCGAATAAATA
CTTTACTTCCCCCAAACTACATAACCGCTTCCATTGCCACAATAGCCATT
GGCAAAGGGGAAAAAACTACCCCCCTCCTTGGTTGGGACCAAATGAAAAA
AAAAGGGAAAAGGGGCCCAAACCAAGCCTAAAAAAAAGGGGGCGGAAATC
TTTCAAGGAATCCTTGGAAATTTGGAAAAAATAATTACCGTTTTCCCCCA
CGGGGAAAACCCCCCAATAAAACCCAAAAAAAGGGGGATTGGAAGGGTTT
TTTTGGCCATATTATAAAAAGGGGGGGGGAACTTTTGGTGGGGAAAAAAA
GGGCTTGGTTTTTCTAGAATCAAAAAAAAAAAAAAAAAAAAGGGGGGGGG
GGCGCCCCCCCCGAAAAAAAAGAACCACCGAGATATTTATAAAGACACGG
GGAAGGGGGGGGGGCGGAAGAGACAAAAAAAATTCTCCCTTTTTATTTAT
TAAGGGGGGGG
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