EY665252

Overview
NameEY665252
Unique NameEY665252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP5_ARATH (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.885e-102
Identity = 176/200 (88.00%), Postives = 189/200 (94.50%), Query Frame = 2
Query:   11 GIWSIRDDLQIPSSPYFPVHAQGPPPANPMVQERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            G+WSIRDDLQ+PSSPYFP +AQG  P  PMVQERFQS+ISQLFQ+RIIRCGGAVDDDMANIIVAQLLYLDA+DP KDIV+YVNSPGGSVTAGMAIFDTM+HIRPDVSTVCVGLAASMGAFLLSAG KGKRYSLPNSRIMIHQPLGGAQGGQTDIDI ANEMLH KANLNGYLAYHTGQSLEKINQ+TDRD+F+S K+ K+
Sbjct:   79 GVWSIRDDLQVPSSPYFPAYAQGQGPP-PMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKE 277          

HSP 2 Score: 35.039 bits (79), Expect = 1.885e-102
Identity = 16/24 (66.67%), Postives = 18/24 (75.00%), Query Frame = 3
Query:  597 KKPKNYGLIDGVSMNPLKSPPPAA 668
            K+ K YGLIDGV MNPLK+  P A
Sbjct:  273 KEAKEYGLIDGVIMNPLKALQPLA 296          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP1_ANASP (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.278e-59
Identity = 113/167 (67.66%), Postives = 136/167 (81.44%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RI+  G  VD ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IFDTMKHIRPDV T+C GLAASMGAFLLSAGAKGKR SLP+SRIMIHQPLGGAQG  TDI+I A E+L+ K  LN YLA HTGQ +E+I ++T+RD+F+SP + K
Sbjct:   14 ERAFDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAK 180          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 6.342e-59
Identity = 112/167 (67.07%), Postives = 135/167 (80.84%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTK 607
            ER   + S+L + RII  G  VD ++AN+IVAQLL+LDA DP KDI +Y+NSPGGSVTAGM IFDTMKHIRPDV T+C GLAASMGAFLLSAG KGKR SLP+SRIMIHQPLGGAQG  TDI+I A E+L+ K  LN YLA HTGQ +E+I ++T+RD+F+SP + +
Sbjct:   14 ERAFDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAR 180          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 5.369e-58
Identity = 109/168 (64.88%), Postives = 139/168 (82.74%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RII  G  VDDD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGMAI+DTM+HI+PDVST+C+GLAASMGAFLL+ GAKGKR +LP++RIMIHQPLGGAQG  TDI+I A E+L  K +LN  LAYHTGQ LE+I ++TDRD F++P++ K+
Sbjct:   13 ERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKE 180          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.562e-57
Identity = 108/168 (64.29%), Postives = 138/168 (82.14%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RII  G  VDDD+AN+IVAQ+LYL++ DP KDI +Y+NSPGGSV AGMAI+DTM+HI+PDVST+C+GLAASMGAFLL+ G KGKR +LP++RIMIHQPLGGAQG  TDI+I A E+L  K +LN  LAYHTGQ LE+I ++TDRD F++P++ K+
Sbjct:   13 ERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKE 180          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNY3 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 8.571e-56
Identity = 107/168 (63.69%), Postives = 137/168 (81.55%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            +R   + S+L + RI+  G  V D+ AN++VAQLL+L+A DP KDI +Y+NSPGGSV+AG+ IFDTM  IRPDV T+C+GLAASMGAFLLSAGAKGKR SLPNSRIMIHQPLGGAQG  TDI+I A E+L+ KA LN +LA HTG+SLE+I  +T+RD+F+S +++K+
Sbjct:   13 DRAFDIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYLYINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMIHQPLGGAQGQATDIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKE 180          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.119e-55
Identity = 105/168 (62.50%), Postives = 138/168 (82.14%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RII  G A+DD++AN+IVAQLL+L++ DP KDI  Y+NSPGG VTAGMA++DTM++I+PDV+TVC+G AASMGA LL+AGAKGKR+SLPNSRIMIHQPLGGAQG  +DI I ANE+L  K  L+G L+ HTGQ+ +KI+++TDRD+F+S  + K+
Sbjct:   15 ERAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKE 182          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNSC (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9605) GN=clpP1 PE=3 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 3.257e-55
Identity = 110/183 (60.11%), Postives = 139/183 (75.96%), Query Frame = 2
Query:   62 PVHAQGPPPANPMVQE-----RFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISP 595
            PV A GP P   +V++     R   + S+L + RII  G  VDD +A+ +VAQ+L+L+A DP KDI IY+NSPGGSVTAG+AI+DTM+ + PDV T+C GLAASMGAFLLS G KGKR +LPN+RIMIHQPLGGAQG   DI+I A E+L+ K  LNG +A HTGQ L+KI+++TDRDYF+SP
Sbjct:    2 PVSAPGPLPT--VVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSP 182          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 4.254e-55
Identity = 111/183 (60.66%), Postives = 138/183 (75.41%), Query Frame = 2
Query:   62 PVHAQGPPPANPMVQE-----RFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISP 595
            P+ A GP P   +V++     R   + S+L + RII  G  VDD +A+ +VAQ+L+L+A DP KDI IYVNSPGGSVTAG+AI+DTM+ + PDV T+C GLAASMGAFLLS G KGKR +LPN+RIMIHQPLGGAQG   DI+I A E+L  K  LNG LA HTGQ L+KI+++TDRDYF+SP
Sbjct:    2 PISAPGPLPT--VVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSP 182          
BLAST of EY665252 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 9.477e-55
Identity = 101/168 (60.12%), Postives = 135/168 (80.36%), Query Frame = 2
Query:  107 ERFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDISANEMLHPKANLNGYLAYHTGQSLEKINQNTDRDYFISPKKTKK 610
            ER   + S+L + RII  G  +DD +AN+++AQLL+L+A DP KDI +Y+NSPGGS+TAGMAI+DT+++IRPDVST+CVGLAASMGAFLL+AG KGKRY+LPN+ IMIHQP GG QG  TDI+I A  +++ K +LN  LA  TGQ LE+I ++TDRDYF++ ++ K+
Sbjct:   16 ERSYDIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEIMIHQPAGGTQGQATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEAKE 183          
The following BLAST results are available for this feature:
BLAST of EY665252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP5_ARATH1.885e-10288.00ATP-dependent Clp protease proteolytic subunit 5, ... [more]
CLPP1_ANASP1.278e-5967.66ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_ANAVT6.342e-5967.07ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP2_SYNJA5.369e-5864.88ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_SYNJB1.562e-5764.29ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP1_SYNY38.571e-5663.69ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_DESAH1.119e-5562.50ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_SYNSC3.257e-5560.11ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP2_SYNS94.254e-5560.66ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_SYNWW9.477e-5560.12ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665252 ID=EY665252; Name=EY665252; organism=Citrus sinensis; type=EST; length=973bp
CCACGCGTCCGGGATTTGGTCCATTAGGGATGATTTGCAAATCCCATCTT
CACCATACTTCCCTGTACATGCGCAAGGGCCACCACCTGCTAACCCGATG
GTGCAAGAGCGGTTTCAGAGTGTTATCAGTCAACTTTTCCAGCATAGAAT
AATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCGAACATTATTGTAG
CTCAGCTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTTATC
TATGTCAATTCTCCAGGAGGATCAGTTACTGCCGGTATGGCCATATTTGA
CACTATGAAGCATATTCGACCTGATGTCTCCACTGTTTGTGTTGGATTAG
CAGCTAGTATGGGAGCTTTCCTGCTTAGTGCTGGGGCCAAAGGAAAAAGA
TACAGTTTGCCCAACTCAAGGATAATGATTCATCAGCCTCTTGGTGGTGC
ACAAGGTGGGCAAACCGACATAGATATTTCAGCTAATGAAATGCTGCATC
CCAAGGCAAACCTGAATGGGTACCTTGCCTACCACACTGGTCAAAGTCTG
GAAAAAATCAACCAGAATACTGACCGTGATTATTTTATAAGCCCAAAAAA
AACCAAAAAATTATGGGCTTATTGACGGGGTTTCCATGAATCCCCTTAAA
AGCCCCCCACCCGCTGCCCGCTGCGGCAAAGGGAAAGGAAAAGCCCAGGG
TGGGACCCACCCTGGGTATCTTTGGCATTAATGGAAGGGGAATTTGAAAA
ATTTAAATTAAACTTTTTTGTTTTGGCCTTTCCATTTTTTTTGTTTTGTT
AAAAAATTTGAAAATGTATAAAACAAAAAATGAAGAAAAAAAAAAAATTT
TTGGGTGCCCGTTTTTTTGAATTTAAAGCGCAAAAAAAAAAAAAATTTTA
AAAAAATAATAACAACATTTTGTGTGGGAAAAAAAAAAAAAAAAAAAAAG
AGGGGGGGGGGCGCGACCAAATT
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