EY665244

Overview
NameEY665244
Unique NameEY665244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_SOLLC (Plastocyanin, chloroplastic OS=Solanum lycopersicum GN=PETE PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.395e-39
Identity = 88/154 (57.14%), Postives = 109/154 (70.78%), Query Frame = 3
Query:   84 GLKAGATPARVV--GSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            GLKAGA+ +  V  G++ K +A+ V +L++KA+LKDVG                  +EVLLGGDDGSLAF+P +FSVS+GEKI FKNNAG+PHNVVFDEDEIP+GV+ SKISMS EDLLN  GETY+VT  EK   TFY  P   +G+VG + V
Sbjct:   16 GLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATAVSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTV 169          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 2.631e-38
Identity = 85/152 (55.92%), Postives = 104/152 (68.42%), Query Frame = 3
Query:   84 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEKA-LTFYTGPSPRSGLVGTMIV 536
            GLKA +     V ++ K SAS +P+LSIKA+LK+VG                  ++VLLG DDGSLAFVPS FSV +GEKIVFKNNAG+PHNV+FDED +PSGV+VSKISMS EDLLN  GET+ V   +K   TFY  P   +G+VG +IV
Sbjct:   16 GLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAASAMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIV 167          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 2.631e-38
Identity = 85/152 (55.92%), Postives = 102/152 (67.11%), Query Frame = 3
Query:   84 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEKA-LTFYTGPSPRSGLVGTMIV 536
            GLKAG+     V ++ K SAS +P+LSIKA++KDVG                  I+VLLG DDGSLAFVPS FS+S GEKIVFKNNAG+PHN+VFDED IPSGV+ SKISMS EDLLN  GET+ V    K   +FY  P   +G+VG + V
Sbjct:   16 GLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTV 167          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_SPIOL (Plastocyanin, chloroplastic OS=Spinacia oleracea GN=PETE PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 8.464e-37
Identity = 86/156 (55.13%), Postives = 105/156 (67.31%), Query Frame = 3
Query:   84 GLKAGA----TPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            GLKA      T A+++ +T     +AVP+LS+KA+LK+VG                  +EVLLGG DGSLAF+P  FSV+SGE+IVFKNNAG+PHNVVFDEDEIPSGV+ +KISMS EDLLN PGETY VT  EK    FY  P   +G+VG + V
Sbjct:   17 GLKASGSIKPTTAKIIPTT-----TAVPRLSVKASLKNVGAAVVATAAAGLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTV 167          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.765e-34
Identity = 82/152 (53.95%), Postives = 99/152 (65.13%), Query Frame = 3
Query:   84 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            GLKA +T      +T+K  A A P++SIKA+LKDVG                   EVLLG  DG LAFVPS  S++SGEKI FKNNAG+PHNVVFDEDE+P+GV+V+KISM  EDLLN PGE Y+VT  EK    FY  P   +G+VG + V
Sbjct:   17 GLKASSTTR---AATVKV-AVATPRMSIKASLKDVGVVVAATAAAGILAGNAMAAEVLLGSSDGGLAFVPSDLSIASGEKITFKNNAGFPHNVVFDEDEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTV 164          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.932e-34
Identity = 79/152 (51.97%), Postives = 99/152 (65.13%), Query Frame = 3
Query:   84 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            GLKA    +      ++ +A A PKL++K++LK+ G                  IEVLLGG DGSLAF+P+ FS++ GEKIVFKNNAGYPHNVVFDEDEIPSGV+V+KISM  +DLLNG GETY V   E    +FY  P   +G+VG + V
Sbjct:   16 GLKASTIKSSAT-VRIQTAAVASPKLTVKSSLKNFGVAAVAAAASIALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTV 166          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.494e-33
Identity = 82/155 (52.90%), Postives = 97/155 (62.58%), Query Frame = 3
Query:   84 GLKAGATPARVVGSTMKASASAV---PKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            GLK   +      ST+  S SA    PKL++K++LKD G                  +EVLLG DDGSLAFVPS F+V+ GEKIVFKNNAG+PHNVVFDEDEIPSGV+ SKISM    LLNG GETY VT  E  +  FY  P   +G+VG + V
Sbjct:   16 GLKLAVSSKPKTLSTISRSTSATRAPPKLALKSSLKDFGVIAVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS2_TOBAC (Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 5.678e-33
Identity = 71/98 (72.45%), Postives = 80/98 (81.63%), Query Frame = 3
Query:  246 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            IEVLLG DDG LAFVP +FSVS+GEKI FKNNAG+PHNVVFDEDEIP+GV+ SKISMS EDLLNGPGETY+VT  EK   TFY  P   +G+VG + V
Sbjct:    1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDASKISMSEEDLLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTV 98          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.157e-32
Identity = 77/152 (50.66%), Postives = 92/152 (60.53%), Query Frame = 3
Query:   84 GLKAGATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            GLK  A       + +  S S  P+L ++A+LKD G                  +EVLLG  DG LAFVPSS  VS+GE IVFKNNAG+PHNVVFDEDEIP+GV+ SKISM  EDLLN PGETY+V    K    FY  P   +G+VG + V
Sbjct:   16 GLKTNAATKVSAMAKIPTSTSQSPRLCVRASLKDFGVALVATAASAVLASNALAVEVLLGASDGGLAFVPSSLEVSAGETIVFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTV 167          
BLAST of EY665244 vs. ExPASy Swiss-Prot
Match: PLAS1_TOBAC (Plastocyanin A'/A'' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.157e-32
Identity = 70/98 (71.43%), Postives = 80/98 (81.63%), Query Frame = 3
Query:  246 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGYPHNVVFDEDEIPSGVEVSKISMSIEDLLNGPGETYAVTRMEK-ALTFYTGPSPRSGLVGTMIV 536
            IEVLLG DDG LAFVP +FSVS+GEKI FKNNAG+PHNVVFDEDEIP+GV+VSKISMS E+ LNGPGETY+VT  EK   TFY  P   +G+VG + V
Sbjct:    1 IEVLLGSDDGGLAFVPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAGVDVSKISMSEEEYLNGPGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTV 98          
The following BLAST results are available for this feature:
BLAST of EY665244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
PLAS_SOLLC1.395e-3957.14Plastocyanin, chloroplastic OS=Solanum lycopersicu... [more]
PLAS2_POPNI2.631e-3855.92Plastocyanin B, chloroplastic OS=Populus nigra GN=... [more]
PLAS1_POPNI2.631e-3855.92Plastocyanin A, chloroplastic OS=Populus nigra GN=... [more]
PLAS_SPIOL8.464e-3755.13Plastocyanin, chloroplastic OS=Spinacia oleracea G... [more]
PLAS_SILPR1.765e-3453.95Plastocyanin, chloroplastic OS=Silene pratensis GN... [more]
PLAS2_ARATH3.932e-3451.97Plastocyanin major isoform, chloroplastic OS=Arabi... [more]
PLAS1_ARATH1.494e-3352.90Plastocyanin minor isoform, chloroplastic OS=Arabi... [more]
PLAS2_TOBAC5.678e-3372.45Plastocyanin B'/B'' OS=Nicotiana tabacum PE=1 SV=1[more]
PLAS_PEA2.157e-3250.66Plastocyanin, chloroplastic OS=Pisum sativum GN=PE... [more]
PLAS1_TOBAC2.157e-3271.43Plastocyanin A'/A'' OS=Nicotiana tabacum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665244 ID=EY665244; Name=EY665244; organism=Citrus sinensis; type=EST; length=1136bp
CAAAAAGAAAAAACAGCAGAACCCCATTTACAGTTACAATGGCTACTGTC
ACCTCTGCAGCTGTCACCGTCCCAACTTTCACCGGCCTTAAAGCCGGTGC
AACACCAGCCAGAGTTGTTGGTTCCACCATGAAGGCCTCAGCCTCTGCTG
TCCCAAAGCTCAGCATCAAGGCCACACTCAAAGATGTTGGAGTGGCCGTT
GCGGCCACAGCTGCCAGCGCAATGCTTGCTAGCAATGCCATGGCCATTGA
GGTTTTGCTTGGTGGTGATGATGGGTCCTTGGCTTTTGTTCCAAGCTCTT
TCTCTGTCAGCTCCGGTGAAAAGATTGTGTTCAAGAACAATGCTGGGTAC
CCACACAACGTTGTTTTCGATGAAGATGAGATTCCGAGTGGTGTTGAAGT
TTCAAAAATCTCCATGTCTATCGAAGACCTTCTCAATGGCCCTGGAGAAA
CTTATGCTGTTACTCGAATGGAAAAAGCACTTACTTTTTACACTGGTCCC
TCTCCAAGGAGTGGGCTGGTTGGGACAATGATTGTAATTAATTCCCTTTC
AAATTTGTTTGCCCCTCCACTTGGTTAAGATCCCTTCTTTTGGTTTTGAG
GATTTCTCTACTTTCAATTGGTGAGAAAAGGTTTGAGTGAAAAAAATAAC
ACAACCAAAAAACATTGTATTCCAATAATTTATAGCGAAATTCTAGTATT
TATAATTAACTCCGTGCCCTTTACTTTTTATAACAAAAATAATTTATCAA
TTCCATAAATATATGGGGTGTCTCTATCTTTCCTTTTATATCCATTAAGC
ATATATACTCATTTCGACACCTAATATTTTTACGCCCGCAATAACAAATA
GGCAAGCCCAGAAGCCAAATTACGGAACACCTTAATCTAATTGTTAAAGA
AATATACATACTGTACTATATTGAAAAAAACTATAAAATAAATATACAAT
TAGGAATAAATCTTTCAAATACAATTACATAAACATATTAAATGATAGAG
ATGTAAAATTACACGGTTCAGATGACTATGAACCCTGTAACTGAAAAAGT
TTATCAATCAAATAACAATTAACATTAGAATATAGAAATAGTATATTAAA
CATAAATCACGTGACTAGGATGATGCATATATAAGA
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