CV720153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 387.882 bits (995), Expect = 3.022e-107 Identity = 185/240 (77.08%), Postives = 215/240 (89.58%), Query Frame = 1 Query: 10 KINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPENVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 K+NDQY TNVLLKIN+KLGG+NS L+LE +IP++ TPT+ILGMDVSHGSPGR+D+PS+AAVVGS+ WPLISRYRA+VRTQS KVEMID+L+KP+ +G DDGIIRELLLDFY+TS+QRKPKQIIIFRDGVSESQF+QVLN+EL QIIKAYQ++ + IPKFTVI+AQKNHHTKLFQ + P+NVPPGTVVD+ IVHPR YDFYM AHAG IGTSRP HYHVLLDEIGF PDD+Q L+ S Sbjct: 572 KMNDQYYTNVLLKINAKLGGMNSKLSLEHRHMIPIVNQTPTLILGMDVSHGSPGRADVPSIAAVVGSRCWPLISRYRASVRTQSPKVEMIDSLFKPLDDGKDDGIIRELLLDFYKTSQQRKPKQIIIFRDGVSESQFSQVLNVELNQIIKAYQYMDQGPIPKFTVIIAQKNHHTKLFQENTPDNVPPGTVVDSGIVHPRQYDFYMYAHAGPIGTSRPTHYHVLLDEIGFLPDDVQKLVLS 811
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 355.91 bits (912), Expect = 1.273e-97 Identity = 170/243 (69.96%), Postives = 202/243 (83.13%), Query Frame = 1 Query: 1 SPTKINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPENVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 +PT++NDQY+TNVLLKIN+KLGG+NSLL +E S IPL+ PT+ILGMDVSHGSPG+SDIPS+AAVV S+ WPL+S+YRA+VR+QS K+EMID L+KP DDG+IRELL+DFY ++ +RKP Q+IIFRDGVSESQF QVLNIEL+QII+A + L E PKFT+IVAQKNHHTK F NVPPGTVVD + HPRN DFYMCAHAGMIGT+RP HYH+L DEIGFS DDLQ L+HS Sbjct: 590 APTRVNDQYITNVLLKINAKLGGLNSLLQIETSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLVSKYRASVRSQSPKLEMIDGLFKPQGAQEDDGLIRELLVDFYTSTGKRKPDQVIIFRDGVSESQFTQVLNIELDQIIEACKFLDENWSPKFTLIVAQKNHHTKFFVPGSQNNVPPGTVVDNAVCHPRNNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHS 832
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 355.525 bits (911), Expect = 1.662e-97 Identity = 170/243 (69.96%), Postives = 203/243 (83.54%), Query Frame = 1 Query: 1 SPTKINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPENVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 +P ++NDQYL N+LLKIN+KLGGINSLL +E S IPL+ TPT+ILGMDVSHG PG+SD PS+AAVV S+ WPLIS+YRA+V TQS K+EM+ +L+KP DDG+IRE L+DFY +S +RKP +I+FRDGVSESQF QV+NIEL+QII+A + L E PKFTVIVAQKNHHTK FQ+ P+NVPPGTVVD ++ HPRNYDFYMCAHAGMIGT+RP HYHVL DEIGFSPDDLQ L+HS Sbjct: 598 APQRVNDQYLLNLLLKINAKLGGINSLLQIEASPSIPLVSKTPTIILGMDVSHGQPGQSDRPSIAAVVSSRQWPLISKYRASVHTQSPKLEMMSSLFKPRGT-EDDGLIRESLIDFYTSSGKRKPDHVIVFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQSGSPDNVPPGTVVDKQVCHPRNYDFYMCAHAGMIGTTRPTHYHVLHDEIGFSPDDLQELVHS 839
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 315.464 bits (807), Expect = 1.906e-85 Identity = 165/251 (65.74%), Postives = 190/251 (75.70%), Query Frame = 1 Query: 1 SPTKINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEAD-----IPKFTVIVAQKNHHTKLFQASGPE---NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 +PTKINDQYLTNVLLKIN+KLGG+NSLL +E++ IPL+ TPT+ILGMDVSHGSPGR D+PSVAAVV S WPLIS+Y+A+V TQS ++EMID+L+K + N D IIRE L+DFY +S+ K DGVSE QFNQVLNIEL QIIKA + L PKFTVIVAQKNHHTK FQ NVPPGTVVD I HPRN DFYMCAHAGMIGT+RP HYHVL DE F+PDDLQ L+H+ Sbjct: 579 APTKINDQYLTNVLLKINAKLGGLNSLLQIERNQAIPLLSKTPTIILGMDVSHGSPGRDDVPSVAAVVSSLEWPLISKYKASVCTQSPRLEMIDSLFKLVGN-EDHVIIRESLMDFYNSSRGHK--------DGVSEGQFNQVLNIELAQIIKACEFLANEKNDSEWSPKFTVIVAQKNHHTKFFQTDRSNKVVNVPPGTVVDKGICHPRNCDFYMCAHAGMIGTTRPTHYHVLHDENNFTPDDLQELVHN 820
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO12_ORYSJ (Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 2.594e-58 Identity = 118/246 (47.97%), Postives = 158/246 (64.23%), Query Frame = 1 Query: 22 QYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALY----KPIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 QYL N+ LK+N K+GG N++L IP++ D PT++ G DV+H SPG PS+AAVV S WP +++Y+ V TQS + E+I LY P+ G+IRELL FY+ + Q KP +II +RDG+SE QF+QVL E++ I KA L E +P T +V QK HHT+LF + + N+ PGTVVDT I HP +DFY+C+H+G+ GTSRP HYHVLLDE GF D LQ L ++ Sbjct: 735 QYLENLALKMNVKVGGRNTVLEDALHKKIPILTDRPTIVFGADVTHPSPGEDASPSIAAVVASMDWPEVTKYKCLVSTQSHREEIISNLYTEVKDPLKGIIRGGMIRELLRSFYQETGQ-KPSRIIFYRDGISEGQFSQVLLYEMDAIRKACASLQEGYLPPVTFVVVQKRHHTRLFPENRRDMMDRSGNILPGTVVDTMICHPSEFDFYLCSHSGIKGTSRPTHYHVLLDENGFKADTLQTLTYN 979
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.682e-57 Identity = 123/252 (48.81%), Postives = 160/252 (63.49%), Query Frame = 1 Query: 10 KINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYK----PIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE--------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 K+N Q L N+ LKIN K+GG N++L S IPL+ D PT+I G DV+H PG PS+AAVV SQ WP +++Y V Q+ + E+I+ LYK P G+IRELL+ F R++ + KP++II +RDGVSE QF QVL EL I KA L PK T IV QK HHT+LF + + N+ PGTVVD++I HP +DFY+C+HAG+ GTSRPAHYHVL DE F+ D LQ L ++ Sbjct: 676 KMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQDPQRGTVSGGMIRELLISFKRSTGE-KPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLETNYQPKVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNN 926
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.196e-57 Identity = 122/252 (48.41%), Postives = 159/252 (63.10%), Query Frame = 1 Query: 10 KINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYK----PIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE--------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 KI+ QYL NV LKIN K+GG N++L S IPL+ D PT+I G DV+H G PS+AAVV SQ WP +++Y V Q+ + E+I LYK P+ G+IR+LL+ F + + Q KP +II +RDGVSE QF QVL EL+ I KA L P T IV QK HHT+LF + + N+ PGTVVDT+I HP +DFY+C+HAG+ GTSRPAHYHVL DE F+ D +Q+L ++ Sbjct: 663 KISKQYLANVSLKINVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQ-KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNN 913
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.196e-57 Identity = 124/253 (49.01%), Postives = 162/253 (64.03%), Query Frame = 1 Query: 10 KINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYK----PIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADI-PKFTVIVAQKNHHTKLFQASGPE--------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 K++ QYL NV LKIN K+GG N++L + IPL+ D PT+I G DV+H PG PS+AAVV SQ WP +++Y V Q+ + E+I L+K P G+IRELL+ F R + Q KP++II +RDGVSE QF QVL EL+ I KA L EAD P T +V QK HHT+LF + + N+ PGTVVD++I HP +DFY+C+HAG+ GTSRPAHYHVL DE F+ D LQ L ++ Sbjct: 747 KMSKQYLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWKDPQRGTVSGGMIRELLISFKRATGQ-KPQRIIFYRDGVSEGQFYQVLFYELDAIRKACASL-EADYQPPVTFVVVQKRHHTRLFANNHKDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNN 997
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.868e-57 Identity = 121/252 (48.02%), Postives = 158/252 (62.70%), Query Frame = 1 Query: 10 KINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYKPIANGN----DDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLF--------QASGPENVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 K+N QY+ NV LKIN K GG N++L IPLI D PT+I+G DV+H PG PS+AAVV S WP I++YR V Q+ + E+I LYK + + G+IRE + F R + Q P++II +RDGVSE QF+QVL E+ I KA L E +P+ T ++ QK HHT+LF N+ PGTVVDT+I HP +DFY+ +HAG+ GTSRPAHYHVLLDE GF+ D LQ L ++ Sbjct: 675 KLNKQYMENVALKINVKTGGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHFIAFRRATGQ-IPQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLFPEQHGNRDMTDKSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNN 925
BLAST of CV720153 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.893e-57 Identity = 122/252 (48.41%), Postives = 160/252 (63.49%), Query Frame = 1 Query: 10 KINDQYLTNVLLKINSKLGGINSLLALEQSSLIPLIKDTPTMILGMDVSHGSPGRSDIPSVAAVVGSQSWPLISRYRAAVRTQSSKVEMIDALYK----PIANGNDDGIIRELLLDFYRTSKQRKPKQIIIFRDGVSESQFNQVLNIELEQIIKAYQHLGEADIPKFTVIVAQKNHHTKLFQASGPE--------NVPPGTVVDTRIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHS 729 K+N Q L N+ LKIN K+GG N++L S IPL+ D PT+I G DV+H PG PS+AAVV SQ WP +++Y V QS + E+ID LY P G++RELL+ F R++ Q KP++II +RDGVSE QF QVL EL+ I KA L P+ T IV QK HHT+LF + + N+ PGTVVD++I HP +DF++C+HAG+ GTSRPAHYHVL DE F+ D LQ L ++ Sbjct: 707 KMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQSHRQELIDDLYNITHDPHRGPICGGMVRELLISFKRSTGQ-KPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEANYQPQVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNN 957 The following BLAST results are available for this feature:
BLAST of CV720153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV720153 ID=CV720153; Name=CV720153; organism=Citrus sinensis; type=EST; length=730bpback to top |