EY665240

Overview
NameEY665240
Unique NameEY665240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1109
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665240_ssr60 microsatellite EY665240_ssr60:60..81. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 4.510e-43
Identity = 88/146 (60.27%), Postives = 108/146 (73.97%), Query Frame = 1
Query:  100 ASSGVLSAITRRLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTPIIDNEKADFERVLSVNVTGVFLGFKHAARVLIPGRNGNI 537
            A S  +SA  R+L GKVA ITGGASGIGACTA++F + GA+VV+ADIQ+ELG S+V  +G   SSYVHCDVTNE  +  A+D  VA  GKLD+MFNNAG+ GP    + +  K DFERVL+VN+ G FLG KHAARV+ P R G+I
Sbjct:    3 AGSSHVSADARKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSI 148          
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.937e-26
Identity = 68/153 (44.44%), Postives = 90/153 (58.82%), Query Frame = 1
Query:  103 SSGVLSAITRRLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSS----YVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTPIIDNEKADFERVLSVNVTGVFLGFKHAARVLIPGRNGNIPFNC 549
            SS   S  ++RL GKVA ITGGA+GIG    ++F + GAKV I D+Q++LG  V +S+    S     ++H DV  E  I NA+D  V   G LDI+ NNAG+ G     I +   ++FE    VNV G FL  KHAARV+IP + G+I   C
Sbjct:    7 SSSYSSLPSQRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLC 159          
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 6.543e-26
Identity = 63/149 (42.28%), Postives = 95/149 (63.76%), Query Frame = 1
Query:  103 SSGVLSAITRRLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATH-GKLDIMFNNAGIGGPN---KTPIIDNEKADFERVLSVNVTGVFLGFKHAARVLIPGRNGNI 537
            ++ V + + +RL+GKVA +TGGA GIG    ++FA+ GA+VVIADI +  G ++  ++G    S+V CDV+ E  ++ A+D  ++ H G+LD+  NNAG+ G        I+  + A+F+RVL VN  G  LG KHAAR + P R G+I
Sbjct:   42 ATAVPTPMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALG-PQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSI 189          
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: BACC_BACAM (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus amyloliquefaciens GN=bacC PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.845e-21
Identity = 58/146 (39.73%), Postives = 78/146 (53.42%), Query Frame = 1
Query:  136 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTPIIDNEKADFERVLSVNVTGVFLGFKHAARVLIPGRNGNIPFNCLAVASKGW 573
            L  K   ITGGASGIG    + F  Q A VV+ADI E  G +++         +V  D+TNE   +NAI   V   G LD++ NNAGI      PI + E +D+ +VL+VN+TG+FL  KHA + ++    GNI   C       W
Sbjct:    3 LTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVQTDITNEPACQNAILSAVDKFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAW 146          
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.845e-21
Identity = 57/146 (39.04%), Postives = 79/146 (54.11%), Query Frame = 1
Query:  136 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTPIIDNEKADFERVLSVNVTGVFLGFKHAARVLIPGRNGNIPFNCLAVASKGW 573
            L  K   ITGGASGIG    + F  Q A VV+ADI E  G +++         +VH D+T+E   +NAI   V   G LD++ NNAGI      PI + E +++ +VL+VN+TG+FL  KHA + ++    GNI   C       W
Sbjct:    3 LTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGI--EIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAW 146          
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.715e-21
Identity = 57/146 (39.04%), Postives = 80/146 (54.79%), Query Frame = 1
Query:  136 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTPIIDNEKADFERVLSVNVTGVFLGFKHAARVLIPGRNGNIPFNCLAVASKGW 573
            L  K   ITGGASGIG    + F  Q A VV+ADI E  G ++V         +V  D+T+E+  ++A++  V T G LD++ NNAGI      PI + E +D+ +VL VN+TG+FL  KHA + ++    GNI   C       W
Sbjct:    3 LTDKTVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGEAMVRKENNDRLHFVQTDITDEAACQHAVESAVHTFGGLDVLINNAGI--EIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAW 146          
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: LINX_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linX PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.726e-18
Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 1
Query:  124 ITRRLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTS--NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTPIIDNEKAD-FERVLSVNVTGVFLGFKHAARVLIPGRNGNI 537
            +  RL GKVA ITGGASG+GA  AK FA++GAKVVI D+ EE+   VV  I  +  ++ ++  DVT+ +   NAI   V   G L  + N AGI  P      + E  + + ++++VN T +FLG K A   L+   NG+I
Sbjct:    1 MANRLAGKVALITGGASGLGAAQAKRFAEEGAKVVIGDLNEEMAKGVVAEIRAAGGDALFIRLDVTDAASWNNAIAAAVDGFGGLTTLSNTAGIIHPGG---FEEESIEGWNKMVAVNQTAIFLGIKAAIPELVKSGNGSI 138          
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 3.845e-18
Identity = 53/139 (38.13%), Postives = 84/139 (60.43%), Query Frame = 1
Query:  136 LEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTS--NSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTPIIDNEKADFERVLSVNVTGVFLGFKHAARVLIPGRNGNIPFN 546
            LEGKVA +TGG  GIGA  A++FA+ G KVVIA+I EE G    E +     + ++V  DV +E+ +KN + +TV  +G +D++ NNA +   +   I +    ++ERV+ VN+TG ++  ++ A  +I  R G +  N
Sbjct:    2 LEGKVAVVTGGGQGIGAAIAQLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAV--MSVKSIFERPLEEWERVIRVNLTGPYICSRYCAEEMIK-RGGGVIIN 137          
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 8.565e-18
Identity = 53/135 (39.26%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  133 RLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTPIIDNEKADFERVLSVNVTGVFLGFKHAARVLIPGRNGNI 537
            RL GKVA ++GGA G+GA   +    +GAKVV  DI +E G +V   +  + + YVH DVT  +    A+D  V   G L ++ NNAGI   N   I D    +++R+L VN+TGVFLG +   + +     G+I
Sbjct:    4 RLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADA-ARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGI--LNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSI 135          
BLAST of EY665240 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 8.565e-18
Identity = 53/135 (39.26%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  133 RLEGKVAFITGGASGIGACTAKVFAQQGAKVVIADIQEELGHSVVESIGTSNSSYVHCDVTNESHIKNAIDQTVATHGKLDIMFNNAGIGGPNKTPIIDNEKADFERVLSVNVTGVFLGFKHAARVLIPGRNGNI 537
            RL GKVA ++GGA G+GA   +    +GAKVV  DI +E G +V   +  + + YVH DVT  +    A+D  V   G L ++ NNAGI   N   I D    +++R+L VN+TGVFLG +   + +     G+I
Sbjct:    4 RLIGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAVAAELADA-ARYVHLDVTQPAQWTAAVDTAVTAFGGLHVLVNNAGI--LNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSI 135          
The following BLAST results are available for this feature:
BLAST of EY665240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MOMAS_ORYSJ4.510e-4360.27Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH2.937e-2644.44Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE6.543e-2642.28Sex determination protein tasselseed-2 OS=Zea mays... [more]
BACC_BACAM2.845e-2139.73Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
BACC2_BACSU2.845e-2139.04Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
BACC_BACSU3.715e-2139.04Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
LINX_PSEPA1.726e-1841.132,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
Y019_THEMA3.845e-1838.13Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
HSD_MYCTU8.565e-1839.263-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO8.565e-1839.263-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-F04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665240 ID=EY665240; Name=EY665240; organism=Citrus sinensis; type=EST; length=1109bp
CCACGCGTCCGTTTTTCTATAATATAATACACGCGGTGAGAAATCAACTC
TTTAGTTCCCTCTCTCTCTCTCTCTCTCTCTGACCCTCACTGCAAAATGG
CTAGCTCAGGGGTTCTTTCTGCAATCACCAGAAGGCTAGAGGGCAAGGTG
GCCTTTATTACCGGAGGGGCTAGTGGAATTGGTGCATGCACTGCAAAAGT
CTTTGCCCAACAGGGTGCCAAAGTTGTCATTGCGGATATTCAGGAAGAAT
TAGGCCATTCAGTTGTTGAATCCATAGGCACATCAAACTCATCCTATGTC
CATTGCGATGTCACAAACGAATCCCACATTAAAAATGCAATCGACCAAAC
CGTTGCAACTCATGGCAAGCTGGACATAATGTTCAACAACGCCGGCATAG
GCGGCCCTAACAAGACCCCCATAATCGACAATGAAAAGGCCGATTTCGAG
CGTGTCCTGAGTGTAAATGTCACCGGAGTTTTCTTGGGCTTCAAGCATGC
TGCTCGTGTCCTGATTCCGGGTCGCAATGGCAACATTCCTTTCAACTGCC
TAGCGGTAGCCTCCAAGGGTTGGGGCTGCTGCCTCAATAGGATAATGGTG
GGTGCAAAACAGGCGTGTTTTTAAGACACCCCCAAAAATAGGCCGGCTTG
GTGGAGCTAAGGCCAATTTGGGGAATAAGGGGGAAATTACTTGGCACCCT
TATGGTCCTTGACAACACCTTTTTGGATACACAATTTATGTTAGGGGATA
ACCAAAAAAAAGATTTAAAAAATATTTTAAAGAAAAAATACACCTGTGAA
AACATTAGAAGGTTGAAGAATTAGAAGAAACAAAAATACATTTTGAATAA
ATGCATTAGTTTTTTTTTTTTTTAGAAAGTTATAGAAGAGTAGAAAGAAT
ATAGGGGGGGAGAGGAAAATGCTACATTTTTATAATTTTTTGTGCAAGAT
AGATGGGTCATTTTCATCCTTAAGTGGATGTGTAAATCTAAATCCCACAC
CACCACACGCACTATAAAAACAAAAAAATAAGATGATGCAATTTAAGATA
TATGAGACCNCGACTATCTACCAGATCAGTTTGAAAACATTTAANCTGTA
TAATTTGAT
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