EY665235

Overview
NameEY665235
Unique NameEY665235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1063
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.081e-38
Identity = 95/151 (62.91%), Postives = 107/151 (70.86%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYKTNWKGTGTQK 606
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAF TKVF   +  + G+  L   K QW S +    K LL+    L D      DP   P+I +H+ K   NKY++  + T TQK
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP-NINSNGSICLDILKEQW-SPALTISKVLLSICSLLTDPNPD--DPLV-PEI-AHMYKTDKNKYESTAR-TWTQK 144          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.107e-38
Identity = 94/151 (62.25%), Postives = 107/151 (70.86%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYKTNWKGTGTQK 606
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDYPFKPPKVAF TKVF   +  + G+  L   K QW S +    K LL+    L D      DP   P+I +H+ K   NKY++  + + TQK
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP-NINSNGSICLDILKEQW-SPALTISKVLLSICSLLTDPNPD--DPLV-PEI-AHMYKTDKNKYESTAR-SWTQK 144          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.195e-37
Identity = 94/151 (62.25%), Postives = 106/151 (70.20%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYKTNWKGTGTQK 606
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDYPFKPPKVAF TKVF   +  + G+  L   K QW S +    K LL+    L D      DP   P+I +H+ K    KY+T  + + TQK
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP-NINSNGSICLDILKEQW-SPALTISKVLLSICSLLTDPNPD--DPLV-PEI-AHMYKTDRAKYETTAR-SWTQK 144          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.662e-37
Identity = 93/151 (61.59%), Postives = 106/151 (70.20%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYKTNWKGTGTQK 606
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAF TKVF   +  + G+  L   K QW S +    K LL+    L D      DP   P+I +H+ K    KY++  + + TQK
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP-NVNSNGSICLDILKEQW-SPALTISKVLLSICSLLTDPNPD--DPLV-PEI-AHMYKTDRAKYESTAR-SWTQK 144          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.931e-37
Identity = 91/147 (61.90%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYKT---NW 585
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDYPFKPPKVAF TKVF   +  + G+  L   K QW S +    K LL+    L D      DP   P+I +H+ K    KY+    NW
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHP-NINSNGSICLDILKEQW-SPALTISKVLLSICSLLTDPNPD--DPLV-PEI-AHMYKTDRAKYEATARNW 141          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 1.726e-36
Identity = 89/151 (58.94%), Postives = 108/151 (71.52%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYKTNWKGTGTQK 606
            MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDYPFKPPKV+F TKV+   +  + G+  L   K QW S +    K LL+    L D      DP   P+I +H+ K   +KY++  + + TQK
Sbjct:    1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHP-NINSNGSICLDILKEQW-SPALTISKVLLSICSLLTDPNPD--DPLV-PEI-AHMYKTDRSKYESTAR-SWTQK 144          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.157e-32
Identity = 80/141 (56.74%), Postives = 95/141 (67.38%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYK 576
            MA++RILKELK+LQ+DPP SCSAGP  EDMFHWQATIMGP +SPY+GGVFLV IHFPPDYPFKPPKV F TKVF   +  + G   L   K+QW S +    K LL+    L D      DP   P+I +H+ K    KY+
Sbjct:    1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHP-NINSNGNICLDILKDQW-SPALTISKVLLSICSLLTDPNPD--DPLV-PEI-AHIYKTDKTKYE 135          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.974e-32
Identity = 81/142 (57.04%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYKT 579
            MASKRI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP DSP+AGGVFLVTIHFPPDYPFKPPKVAF TKV+   +  + G+  L   K QW S +    K LL+    L D      DP   P+I +H+ K    KY++
Sbjct:    1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHP-NINSNGSICLDILKEQW-SPALTVSKVLLSICSLLTDPNPD--DPLV-PEI-AHIYKTDRVKYES 136          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.462e-32
Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 1
Query:  154 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVF 375
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP DSPY GGVF +TIHFP DYPFKPPKVAF T+++
Sbjct:    1 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 74          

HSP 2 Score: 31.9574 bits (71), Expect = 5.462e-32
Identity = 25/78 (32.05%), Postives = 37/78 (47.44%), Query Frame = 3
Query:  372 IFILTLNSNGSICLDILKEPMGVLLLPISKGVANQSWFII*RNQIPNGSVWVTQNLLTCYKTDREQVQNQLEGNWNPK 605
            I+   +NSN SICLDIL+       L ISK + +    +      PN    +   +   YKTDR++  N++   W  K
Sbjct:   73 IYHPNINSNDSICLDILRSQWSP-ALTISKVLLSICSLLC----DPNPDDPLVPEIARIYKTDRDK-YNRISREWTQK 144          
BLAST of EY665235 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 4.117e-30
Identity = 73/140 (52.14%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  157 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFMTKVFSS*H*IAMGAFALTS*KNQWESCSYPFPKGLLTNPGSLFDGTKSRMDPFG*PKICSHVTKPTGNKYK 576
            +SKRI KEL DL++DPPTSCSAGPV +D++HWQA+IMGP DSPYAGGVF ++IHFP DYPFKPPK++F TK++   +  A G   L   K+QW S +    K LL+    L D      DP   P+I +H+ K    KY+
Sbjct:    3 SSKRIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHP-NINANGNICLDILKDQW-SPALTLSKVLLSICSLLTDANPD--DPLV-PEI-AHIYKTDRPKYE 136          
The following BLAST results are available for this feature:
BLAST of EY665235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
UBC9_ARATH1.081e-3862.91SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC10_ARATH4.107e-3862.25Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC4_SOLLC1.195e-3762.25Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC28_ARATH2.662e-3761.59Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC8_ARATH5.931e-3761.90Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC11_ARATH1.726e-3658.94Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC29_ARATH1.157e-3256.74Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC30_ARATH1.974e-3257.04Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UB2D3_BOVIN5.462e-3275.68Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus G... [more]
UBC4_YEAST4.117e-3052.14Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665235 ID=EY665235; Name=EY665235; organism=Citrus sinensis; type=EST; length=1063bp
AATTTTTCTCCTGCTTCCATTTTTCCTTCGCCGTTCAATTTTTTTAAGTA
TCTCAGTTTTTGTTTCTAATTTTCCCGATCTCCCTGTCTCCCTCACGAAT
CCACATATTGCAAGGCCAAATCAGGAGGATCTGCTGCTTCTCAGGTTGAA
ACTATGGCGTCGAAACGGATCTTGAAGGAGCTCAAAGATTTGCAGAAGGA
TCCTCCTACATCATGCAGTGCCGGTCCTGTTGCTGAAGACATGTTTCATT
GGCAGGCGACAATCATGGGTCCTCCAGATAGTCCGTATGCTGGGGGTGTT
TTTCTAGTTACCATCCATTTTCCCCCAGACTATCCATTCAAGCCTCCCAA
GGTAGCATTCATGACAAAGGTATTTTCATCCTAACATTAAATAGCAATGG
GAGCATTTGCCTTGACATCTTGAAAGAACCAATGGGAGTCCTGCTCTTAC
CCATTTCCAAAGGGGTTGCTAACCAATCCTGGTTCATTATTTGACGGAAC
CAAATCCCGAATGGATCCGTTTGGGTAACCCAAAATTTGCTCACATGTTA
CAAAACCGACAGGGAACAAGTACAAAACCAACTGGAAGGGAACTGGAACC
CAAAAGTATGGCAATGGGCTAAACCCTGGGGTTTATGGGGGGGGAGGGGG
GGTCCCTTTTTCTTTTTTAATTCTGGGTTTTCAAGGTAAAGGAAAAAAAA
ATTCTGGACCGTGTCATATCCATAAAAAAGGTGGAAAATTAAAAAAAAGG
GTCCACATAATATCCCCCCCAAAATTGGAAAAAGGAAAAAAAACCGGGTT
AGATTTCTTAAAACTGGTAAAAAAGAGAAAAATGGTCACACTTGAGGTAC
AAAACAAAGAACTGGACTTTCACTAAAAATAGAGGTGTCCATTATGGACT
CCATCACTAAAATTTGTGTAATCGAACTTACTTTTTAAACAAAAATAAAG
TCAAAAAACAATTTTTATTATTTATTATAATAAGATAAAAAAAAAACAAA
ATAAAAGAAGAGAGGGGGGACGTACTGCTCATCNTATTTATCATGAGAAT
GATATCAATTGTA
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