CX043662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_IPOBA (ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.681e-37 Identity = 80/137 (58.39%), Postives = 98/137 (71.53%), Query Frame = -2 Query: 345 KDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPIHF 755 +D SVP +TRV AI EIC QAKF D T++FL++LAENGRL+++D I KRF ELTMAH+GEVK TVT+VI + +DP+ILGGLVVEFGQKVFDMSI++RARQMERFLREP++F Sbjct: 108 RDPSVPVDTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATVTTVIPLPADEEKELKATLQEMVGQGKSVQIEQKIDPTILGGLVVEFGQKVFDMSIRTRARQMERFLREPLNF 244
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_ARATH (ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana GN=At5g13450 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.396e-31 Identity = 71/140 (50.71%), Postives = 92/140 (65.71%), Query Frame = -2 Query: 336 KDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPIHFGTL 755 KD SVP TR+ AI + C QAKF++ TK+FL +LAENG+L+NLD I K+F++LT AH+G+VKV VT+VI + +DPSI GGL+VEF QKV DMSI++RA+QMER LREP+ F L Sbjct: 99 KDPSVPRGTRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDVKVLVTTVIPLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEFQQKVLDMSIRTRAQQMERLLREPVDFNNL 238
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_PONAB (ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.393e-15 Identity = 44/129 (34.11%), Postives = 67/129 (51.94%), Query Frame = -2 Query: 357 VPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 743 V +VK++N+I + +FS +T + + +LAENGRL N + F + AH+GEV TVTS L DPSILGG++V G+K DMS+K++ +++ R +RE Sbjct: 83 VKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSAHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLSRAMRE 211
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_HUMAN (ATP synthase subunit O, mitochondrial OS=Homo sapiens GN=ATP5O PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.165e-14 Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = -2 Query: 357 VPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 743 V +VK++N+I + +FS +T + + +LAENGRL N + F + H+GEV TVTS L DPSILGG++V G+K DMS+K++ +++ R +RE Sbjct: 83 VKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLGRAMRE 211
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_RHIFE (ATP synthase subunit O, mitochondrial OS=Rhinolophus ferrumequinum GN=ATP5O PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13 Identity = 39/124 (31.45%), Postives = 65/124 (52.42%), Query Frame = -2 Query: 357 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 728 +VK++N++ T+ KFS +T + + +LAENGRL N + F + H+GEV +VT+ L DPSI+GG+++ G+K DMS K++ +++ R +RE Sbjct: 88 KVKSLNDMTTKEKFSPLTSNLMNLLAENGRLNNTPGVISAFSTIMSVHRGEVPCSVTTASPLDEATLSELKTVLQSFLSKNQILKLEVKTDPSIMGGMIIRIGEKYVDMSAKTKIQKLSRVMRE 211
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_MOUSE (ATP synthase subunit O, mitochondrial OS=Mus musculus GN=Atp5o PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.700e-13 Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = -2 Query: 357 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 728 +VK++N+I + KFS +T + + +LAENGRL N I F + H+GEV TVT+ L DPSI+GG++V G+K DMS KS+ +++ + +RE Sbjct: 88 KVKSLNDITKREKFSPLTANLMNLLAENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILKLEIKTDPSIMGGMIVRIGEKYVDMSAKSKIQKLSKAMRE 211
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_RAT (ATP synthase subunit O, mitochondrial OS=Rattus norvegicus GN=Atp5o PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.605e-13 Identity = 40/124 (32.26%), Postives = 64/124 (51.61%), Query Frame = -2 Query: 357 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 728 +VK++ +I T+ KFS +T + + +LAENGRL N + F + H+GEV TVT+ L DPSI+GG++V G+K DMS KS+ +++ + +R+ Sbjct: 88 KVKSLKDITTKEKFSPLTANLMNLLAENGRLGNTQGVISAFSTIMSVHRGEVPCTVTTAFPLDEAVLSELKTVLNSFLSKGQILNLEVKTDPSIMGGMIVRIGEKYVDMSAKSKIQKLSKAMRD 211
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_BOVIN (ATP synthase subunit O, mitochondrial OS=Bos taurus GN=ATP5O PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.015e-13 Identity = 40/129 (31.01%), Postives = 66/129 (51.16%), Query Frame = -2 Query: 357 VPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 743 V +VK+++++ + KFS +T + + +LAENGRL N + F + H+GEV TVT+ L +DPSI+GG++V G+K DMS K++ +++ R +RE Sbjct: 83 VKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTVTTASALDEATLTELKTVLKSFLSKGQVLKLEVKIDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAMRE 211
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_CALMO (ATP synthase subunit O, mitochondrial OS=Callicebus moloch GN=ATP5O PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12 Identity = 39/131 (29.77%), Postives = 66/131 (50.38%), Query Frame = -2 Query: 351 VPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPI 743 V +VK++++I + +FS +T + + +LAENGRL N + F + H+GE+ TVT+ L DPSI+GG++V G+K DMS K++ +++ + +RE I Sbjct: 83 VKHSVKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEIPCTVTTASPLEETTLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAMREVI 213
BLAST of CX043662 vs. ExPASy Swiss-Prot
Match: ATPO_CALJA (ATP synthase subunit O, mitochondrial OS=Callithrix jacchus GN=ATP5O PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12 Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = -2 Query: 351 RVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREPI 728 +VK++++I + +FS +T + + +LAENGRL N + F + H+GEV TVT+ L DPSI+GG++V G+K DMS K++ +++ + +RE I Sbjct: 88 KVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTTASPLEEATLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAMREVI 213 The following BLAST results are available for this feature:
BLAST of CX043662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043662 ID=CX043662; Name=CX043662; organism=Citrus sinensis; type=EST; length=756bpback to top |