EY665226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 7.152e-53 Identity = 107/155 (69.03%), Postives = 120/155 (77.42%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR + + G + FSEGGLD LG + +SILA A Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPS--LVHAQSILAIWA 164
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 9.341e-53 Identity = 107/155 (69.03%), Postives = 120/155 (77.42%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR + + G + FSEGGLD LG + +SILA A Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPS--LVHAQSILAIWA 163
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 2.081e-52 Identity = 106/155 (68.39%), Postives = 119/155 (76.77%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR + + G + FSEGGLD LG + +SILA A Sbjct: 13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPS--LVHAQSILAIWA 164
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 2.081e-52 Identity = 106/155 (68.39%), Postives = 120/155 (77.42%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR + + G + FSEGGLD LG + +SILA A Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPS--LVHAQSILAIWA 163
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.718e-52 Identity = 105/153 (68.63%), Postives = 117/153 (76.47%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 F G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR + + G + FSEGGLD LG + +SILA A Sbjct: 13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPS--LVHAQSILAIWA 162
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 4.636e-52 Identity = 105/153 (68.63%), Postives = 116/153 (75.82%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 F G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR + + G + FSEGGLD LG + +SILA A Sbjct: 13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPS--LVHAQSILAIWA 162
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 6.055e-52 Identity = 105/155 (67.74%), Postives = 120/155 (77.42%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 F GKAV L+PS +E++ G+++MRKT SK+ VSS SPWYGP+RVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR + +GG + FS+GGLD LG + +SILA A Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGS-QIFSQGGLDYLGNPS--LVHAQSILAIWA 164
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 7.908e-52 Identity = 105/155 (67.74%), Postives = 120/155 (77.42%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR + + G + FSEGGLD LG + +SILA A Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPS--LVHAQSILAIWA 164
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 2.301e-51 Identity = 104/155 (67.10%), Postives = 118/155 (76.13%), Query Frame = 2 Query: 80 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 F GK V L+PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL AR + ++ G + FSEGGLD LG + +SILA A Sbjct: 13 FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGS-QIFSEGGLDYLGNPS--LVHAQSILAIWA 164
BLAST of EY665226 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.925e-51 Identity = 103/151 (68.21%), Postives = 115/151 (76.16%), Query Frame = 2 Query: 86 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARKRSQVR*GCVVQGGKLKSFSEGGLD*LGKTKAWIPRPKSILAFGA 538 G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R + + G + FSEGGLD LG + +SILA A Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS-QIFSEGGLDYLGNPS--LVHAQSILAIWA 152 The following BLAST results are available for this feature:
BLAST of EY665226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665226 ID=EY665226; Name=EY665226; organism=Citrus sinensis; type=EST; length=1008bpback to top |