EY665225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.249e-55 Identity = 104/122 (85.25%), Postives = 110/122 (90.16%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT KD+W LAYD SDDQQDIT GKG VD+LFQAPM +GTHY+VMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVF KMGI P Sbjct: 65 QTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 186
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.249e-55 Identity = 104/122 (85.25%), Postives = 110/122 (90.16%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT KD+W LAYD SDDQQDIT GKG VD+LFQAPM +GTHY+VMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVF KMGI P Sbjct: 65 QTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 186
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.826e-54 Identity = 101/122 (82.79%), Postives = 109/122 (89.34%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT DRW LAYD SDDQQDIT GKG VDS+FQAPMGTGTH++V+SSY+Y+SQGLR YNLDN MDG YIAPAFMDKLVVHITKNF++LPNIKVPLILGIWGGKGQGKSFQCELV KMGI P Sbjct: 65 QTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINP 186 HSP 2 Score: 22.3274 bits (46), Expect = 1.826e-54 Identity = 12/30 (40.00%), Postives = 16/30 (53.33%), Query Frame = 3 Query: 408 GKHPNLNKQRNMERTELIKKRKTGRRLLND 497 G+ L +QR E +LIKK K +ND Sbjct: 200 GEPAKLIRQRYREAADLIKKGKMCCLFIND 229
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.527e-53 Identity = 100/122 (81.97%), Postives = 108/122 (88.52%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT DRW LAYD SDDQQDIT GKG VDSLFQAPMG GTH +++SSY+YISQGLR Y+ DNTMDGLYIAPAFMDKL+VH+ KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF KMGI P Sbjct: 53 QTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 174
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 5.803e-53 Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT KDRW LA+D SDDQQDIT GKG VDSLFQAP G+GTH+++MSSY+YIS GLR YN DN MDG YIAPAFMDKLVVHITKNFM+LPN+KVPLILGIWGGKGQGKSFQCELVF KM I P Sbjct: 65 QTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISP 186
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 207.608 bits (527), Expect = 9.741e-53 Identity = 100/122 (81.97%), Postives = 108/122 (88.52%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT +DRW LAYD SDDQQDIT GKG VDSLFQAP G GTH +V+SSY+Y+SQGLRTY+ DNTM G YIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF KMGI P Sbjct: 56 QTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 177 HSP 2 Score: 21.557 bits (44), Expect = 9.741e-53 Identity = 11/30 (36.67%), Postives = 16/30 (53.33%), Query Frame = 3 Query: 408 GKHPNLNKQRNMERTELIKKRKTGRRLLND 497 G+ L +QR E ++IKK K +ND Sbjct: 191 GEPAKLIRQRYREAADIIKKGKMCCLFIND 220
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 203.756 bits (517), Expect = 2.815e-52 Identity = 97/122 (79.51%), Postives = 106/122 (86.89%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT +DRW LAYD SDDQQDIT GKG VD+LFQAPMG GTH +V+SSYDYISQG ++YN DN MDG YIA FMDKLVVH++KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF KMGI P Sbjct: 61 QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITP 182 HSP 2 Score: 23.8682 bits (50), Expect = 2.815e-52 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 408 GKHPNLNKQRNMERTELIKKRKTGRRLLND 497 G+ L +QR E ++LIKK K +ND Sbjct: 196 GEPAKLIRQRYREASDLIKKGKMSCLFIND 225
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 3.762e-52 Identity = 98/122 (80.33%), Postives = 105/122 (86.07%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT DRW L D SDDQQDIT GKG VDSLFQAP GTGTH++V+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF KMGI P Sbjct: 69 QTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINP 190
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 8.380e-52 Identity = 95/122 (77.87%), Postives = 105/122 (86.07%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT DRW L D SDDQQDI GKG VDSLFQAP GTGTH++V+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF KMGI P Sbjct: 69 QTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINP 190
BLAST of EY665225 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.985e-51 Identity = 96/122 (78.69%), Postives = 103/122 (84.43%), Query Frame = 1 Query: 1 QTMKDRWTPLAYDESDDQQDITPGKGAVDSLFQAPMGTGTHYSVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFPKMGI*P 366 QT DRW LAYD SDDQQDIT GKG VDSLFQAPM GTHY+V+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI KNFM+LPNIKVPLILG+WGGKGQGKSFQCELVF KMGI P Sbjct: 69 QTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINP 190 HSP 2 Score: 22.7126 bits (47), Expect = 3.985e-51 Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 408 GKHPNLNKQRNMERTELIKKRKTGRRLLND 497 G+ L +QR E ++LIKK K +ND Sbjct: 204 GEPAKLIRQRYREASDLIKKGKMCVLFIND 233 The following BLAST results are available for this feature:
BLAST of EY665225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665225 ID=EY665225; Name=EY665225; organism=Citrus sinensis; type=EST; length=1052bpback to top |