EY665218

Overview
NameEY665218
Unique NameEY665218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1045
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665218_ssr471 microsatellite EY665218_ssr471:471..482. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 9.185e-51
Identity = 94/98 (95.92%), Postives = 98/98 (100.00%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 306
            A+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMM+INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ
Sbjct:  295 ASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 392          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.200e-50
Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  296 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 394          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.567e-50
Identity = 93/99 (93.94%), Postives = 98/99 (98.99%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            ANGLARRCIVQVSYAIGVP+PLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM+TINLDLKRGGN RFLKTAAYGHFGRDDPDFTWE+VKPLKWEKPQ+
Sbjct:  295 ANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNDRFLKTAAYGHFGRDDPDFTWEIVKPLKWEKPQS 393          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.490e-50
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            ANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMMTINLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA
Sbjct:  295 ANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 392          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.559e-50
Identity = 94/101 (93.07%), Postives = 98/101 (97.03%), Query Frame = 1
Query:    7 VRANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            V ANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  293 VVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.559e-50
Identity = 94/101 (93.07%), Postives = 98/101 (97.03%), Query Frame = 1
Query:    7 VRANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            V ANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  293 VVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.559e-50
Identity = 94/101 (93.07%), Postives = 98/101 (97.03%), Query Frame = 1
Query:    7 VRANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            V ANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  293 VVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.559e-50
Identity = 93/99 (93.94%), Postives = 98/99 (98.99%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            ANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK QA
Sbjct:  295 ANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKTQA 393          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 5.954e-50
Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 309
            ANGLARRC+VQVSYAIGVPEPLSVFVDSYGTG+IPDKEIL IVKE+FDFRPGM+TINLDLKRGGNGRFLKTA YGHFGRDDPDFTWE+VKPLKWEKPQ+
Sbjct:  295 ANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGQIPDKEILNIVKENFDFRPGMITINLDLKRGGNGRFLKTAGYGHFGRDDPDFTWEIVKPLKWEKPQS 393          
BLAST of EY665218 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.016e-49
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 1
Query:   13 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 300
            ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK
Sbjct:  295 ANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
The following BLAST results are available for this feature:
BLAST of EY665218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_SOLTU9.185e-5195.92S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK_MEDTR1.200e-5094.95S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK2_ELAUM1.567e-5093.94S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK1_POPTR3.490e-5096.97S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK_BRARP4.559e-5093.07S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU4.559e-5093.07S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK3_BRAJU4.559e-5093.07S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK2_VITVI4.559e-5093.94S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK1_ELAUM5.954e-5091.92S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK5_VITVI1.016e-4996.88S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665218 ID=EY665218; Name=EY665218; organism=Citrus sinensis; type=EST; length=1045bp
CCACGCGTCCGTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTC
CTATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATG
GAACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGC
TTTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGG
CGGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGG
ATGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAG
CCTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAA
GTTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCT
GCTTTGTAATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCC
CCATTCAATTTCCTTTCCTTTTTCTTTCTTTCCCCACTTCTTTTTTTGGT
TTTGGTTTAATGTACCATGTCCCCACTGTTGTGTAGTGATAATCAATTGA
AAATTTTGCTCAACTGGGTGCCTGGAATTTATAAAAATTCTTCCCTTTTG
GCTTCCAACATATTTTTTGGAAAAGGAAAAATGGAAGGCAACCAGCCGAT
TGGTATTATATTTTGAAACTTTTTGGCCAAAAGCCCAATATTTGGGTTTT
GGCTTAATTAAAAATTAACCACACATGGTGGTGGGGCGGGTTGGGCCCAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGCCGCGCTC
AAAAGAAGAATCCAAAAATTAAAATAACAGGTAGGCACGGGCAACTTACA
CTAACCACCTCTCAAATAAGTGGACCACAAAATGCTATTATATCACAAGG
GGGCCAAACCATTTATTAATAAAGGAAATTGGAGAAAAGGGGAAAAAAAA
AACCCTGAGGGGGAGATAACCACACACAACATAAAACACTCGCCCTTTGT
GAAGCAACACACATCTAATACACCCCCCCCTTAAACCACCGCGGC
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