EY665216
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 227.639 bits (579), Expect = 8.765e-59 Identity = 130/214 (60.75%), Postives = 150/214 (70.09%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MATSAIQQSAFAGQTAL+QSNE V K+G GGR++MRRTVKSAP SIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP E + +FG + K ++ L L P ++ILAI ++ L GF + ++GG P LGE + P+ PGG + PL A P Sbjct: 1 MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP-----EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAC-QVVLMGFV-EGYRVGGGP-LGEGLD-PIYPGGA--FDPLGLADDP 203
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.653e-57 Identity = 130/214 (60.75%), Postives = 147/214 (68.69%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MATSAIQQSAFAGQTAL+ NE VRK+G GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFP E + FG + K ++ L L P ++ILAI ++ L GF + ++GG P LGE + + PGG + PL A P Sbjct: 1 MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP-----EILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI-WAAQVVLMGFV-EGYRVGGGP-LGEGLD-KIYPGGA--FDPLGLADDP 203
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 2.159e-57 Identity = 129/214 (60.28%), Postives = 147/214 (68.69%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MATSAIQQSAF G+T LRQ NEF+RK G R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FP E E + +FG + K ++ L L P ++ILAI ++ L GF + ++GG P LGE + PL PGG + PL A P Sbjct: 1 MATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFP-----ELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAI-WATQVVLMGFV-EGYRVGGGP-LGEGLD-PLYPGGA--FDPLGLADDP 203
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.204e-57 Identity = 127/214 (59.35%), Postives = 148/214 (69.16%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MATSAI+QSAFAGQTAL+ NE VRK+G +GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFP E + +FG + K ++ L L P ++ILA+ ++ L G + ++GG P LGE + + PGG + PL A P Sbjct: 1 MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP-----EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAV-WASQVVLMGLI-EGYRVGGGP-LGEGLD-KIYPGGA--FDPLGLADDP 203
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 1.399e-56 Identity = 129/214 (60.28%), Postives = 149/214 (69.63%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MA SAIQ SAFAGQTAL+Q +E VRKVGV+DG R +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+FP E + QFG + K ++ L L P ++ILAI ++ L G + ++GG P LGE + PL PGG + PL A P Sbjct: 1 MAASAIQSSAFAGQTALKQRDELVRKVGVSDG-RFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFP-----ELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAI-WATQVVLMGLI-EGYRVGGGP-LGEGLD-PLYPGGA--FDPLGLADDP 202
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 2.387e-56 Identity = 126/214 (58.88%), Postives = 146/214 (68.22%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MATS IQQSAFAGQT L+ NE VRKVG +GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP E + +FG + K ++ L L P ++ILAI + + + ++GG P LGE + L PGG + PL A P Sbjct: 1 MATSTIQQSAFAGQTLLKPQNELVRKVG-GNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP-----ELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAV--EGYRVGGGP-LGEGLD-QLYPGGA--FDPLGLAEDP 202
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 7.679e-55 Identity = 126/214 (58.88%), Postives = 144/214 (67.29%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MAT AIQQSAF GQ + NEF+RKVG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFP E + +FG + K ++ L L P ++ILAI ++ L GF + ++GG P LGE + + PGG + PL A P Sbjct: 1 MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP-----EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWAC-QVVLMGFV-EGYRVGGGP-LGEGLD-KIYPGGA--FDPLGLADDP 203
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.499e-50 Identity = 123/214 (57.48%), Postives = 146/214 (68.22%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFP E + +FG + K ++ L L P ++ILAI + ++ L GF + ++GG P LGE + + PGG + PL A P Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFP-----EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAV-QVVLMGFV-EGYRVGGGP-LGEGLD-KVYPGGA--FDPLGLADDP 201
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.499e-50 Identity = 123/214 (57.48%), Postives = 146/214 (68.22%), Query Frame = 1 Query: 46 MATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MA SA+ Q+ TA R+ +E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFP E + +FG + K ++ L L P ++ILAI + ++ L GF + ++GG P LGE + + PGG + PL A P Sbjct: 1 MAASALHQTTSFLGTAPRR-DELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFP-----EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAV-QVVLMGFV-EGYRVGGGP-LGEGLD-KVYPGGA--FDPLGLADDP 201
BLAST of EY665216 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.957e-50 Identity = 124/216 (57.41%), Postives = 142/216 (65.74%), Query Frame = 1 Query: 46 MAT-SAIQQSAFAGQTALR-QSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP*NPLQEWSESSAKQFGSRLALKYSLKV----ALTILATPTSFLLRTILAIRGLPRLWLRGFW*KEKKLGGRPSLGEETETPLSPGGGIFYTPLVRAYKP 675 MAT SAIQ S+ AGQT LR Q NE V+KVG A RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCVFP E + +FG + K ++ L P ++ILAI ++ L G + GG +LGE + PL PGG + PL A P Sbjct: 1 MATASAIQSSSLAGQTLLRPQQNELVKKVGTAQA-RITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFP-----ELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWAC-QVVLMGLIEGYRVGGG--TLGEGLD-PLLPGGA--FDPLGLADDP 204 The following BLAST results are available for this feature:
BLAST of EY665216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665216 ID=EY665216; Name=EY665216; organism=Citrus sinensis; type=EST; length=1014bpback to top |