EY665214

Overview
NameEY665214
Unique NameEY665214
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1037
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665214_ssr457 microsatellite EY665214_ssr457:457..468. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY665214 vs. ExPASy Swiss-Prot
Match: UBAX1_ARATH (UBA and UBX domain-containing protein At4g15410 OS=Arabidopsis thaliana GN=At4g15410 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.295e-12
Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 2 
Query:   35 EANSSLINSFVEITSSTKDEALFFLESHQWNLDAAVSTFLDN 160
            E N +LINSF+EITSS+++EA FFLESH WNLDAAVSTFLDN
Sbjct:    4 ETNENLINSFIEITSSSREEANFFLESHTWNLDAAVSTFLDN 45
The following BLAST results are available for this feature:
BLAST of EY665214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UBAX1_ARATH8.295e-1278.57UBA and UBX domain-containing protein At4g15410 OS... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665214 ID=EY665214; Name=EY665214; organism=Citrus sinensis; type=EST; length=1037bp
ATAACGAATCGGATCAATGGACAACCCAACAGCAGAAGCTAACTCTTCTT
TAATCAATTCTTTCGTGGAGATCACATCATCCACCAAAGACGAAGCTCTC
TTCTTCTTGGAGTCTCATCAGTGGAATCTAGACGCCGCCGTTTCGACTTT
TCTAGACAACGCCGCAGCGGCCACCGCCTCCCCCGAAGCATCTCAATCGG
TCGCTACTCTCCCTGCCGTTAACTCCCCGTCGCTTTCAAACTCCCCCTCG
ACCTCTCCGTCTGCGTCTTTGTCTCGTTCCCCGTCCCGGTCTCGGTCGCC
ATCACCTGCTGCGGCTCGCGATCCGTACGAGCTGCGTTCCCGAAGCCGAC
GGGGGAAGAAGGAGGATAAGAAGGCGGCGACTGGGACATCACGTGGGGGG
CATTTCGGACTCTTGCTGATCTGAATAGGACTCCTCCTGGTGGGGACGAT
AGCGATGACGACGACGACGAGCCGCAGCAGATTATACTGGTGGTGGGAAA
AGCGGGAAGCGGGTCCAAAAGCCTACCAAGGGGAATCAGTGGATGAAATT
TTCATTCAGGCAAGAAATTCAGTGGATAAAAGGGTTGAACTTTCGGGAGC
AATAAGGCTAAAAAGCCTTTACTGGGAAAAGGAAGGGGACTCCCTGGGGA
AAGAAGGAATATACGGGGCCAGGGACCAACCGCACGGAAAAAGGCTAAAA
AAAAAATGCATTTTTTGGGGGGAAGGGGGTTAATGGGATAGAGAAGGGGA
TGATGGGGGAGGGAAGGGGGAAGTACTGCCCGAAAGCTCTCCATTTTTGG
AAGGAAAGTTTTATAACAAAAAATATAAACCCCTTTTTTTAATAGAAAAT
GTAGTCAAATAATGGGAGAAGGGGAGAAGAAGATTTTGGGGGGGGGAGGA
GGGGATGAGCAAGATGTGTTAAAGGCGATAATGTGGGATAGGGAAAGAAA
AGAGGAAACCCAGGTACATAAAACTCAATAAGATGTGTGTCGAATGTGAT
AATCGATGAAGGGGGCAGGAGAACGAGTGGTAACCGT
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