EY665212

Overview
NameEY665212
Unique NameEY665212
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1108
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665212 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.594e-48
Identity = 88/109 (80.73%), Postives = 98/109 (89.91%), Query Frame = 3
Query:   54 DGKYFVTVQDRDWYWRAYLPEGADRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 380
            DGKYFVTV+DRDWYWRA+LPEG DR+HPAC+PFGP+   L G+ FPKSLVVVAGLDLIQDWQL Y EGLKKAGQ+VKLLYLEQATIGFY LPNN HF+TVMDEI+ FV+
Sbjct:  232 DGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYLLPNNNHFHTVMDEIAAFVN 340          
BLAST of EY665212 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 2.082e-48
Identity = 85/108 (78.70%), Postives = 97/108 (89.81%), Query Frame = 3
Query:   54 DGKYFVTVQDRDWYWRAYLPEGADRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFV 377
            DGKYFVT+QDRDWYWRAYLPEG DRDHPACNPFGP+G  L GV FPKSLVVVAGLDL+QDWQLAY++GLKK G +V LLYL+QATIGFYFLPNN HF+ +M+E++ FV
Sbjct:  234 DGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGFYFLPNNDHFHCLMEELNKFV 341          
BLAST of EY665212 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.349e-47
Identity = 85/109 (77.98%), Postives = 98/109 (89.91%), Query Frame = 3
Query:   54 DGKYFVTVQDRDWYWRAYLPEGADRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVS 380
            DGKYFVTV+DRDWYW+A+LPEG DR+HPACNPF P+G  L GV FPKSLVVVAGLDLI+DWQLAY EGLKKAGQ+VKL++LE+AT+GFY LPNN HF+ VMDEIS FV+
Sbjct:  234 DGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVN 342          
BLAST of EY665212 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 7.421e-38
Identity = 71/114 (62.28%), Postives = 89/114 (78.07%), Query Frame = 3
Query:   54 DGKYFVTVQDRDWYWRAYLPEGADRDHPACNPFGPKGIDLVGVKFPKSLVVVAGLDLIQDWQLAYMEGLKKAGQDVKLLYLEQATIGFYFLPNNGHFYTVMDEISNFVSCNY*Y 395
            DGKYFVT+QDRDWYW+AYLPE ADRDHPACNPFGP G  L G+ F KSL++V+GLDL  D QLAY + L++ G  VK++  E AT+GFY LPN  H++ VM+EIS+F++ N  Y
Sbjct:  241 DGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYY 354          
The following BLAST results are available for this feature:
BLAST of EY665212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
GI1L3_ARATH1.594e-4880.73Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GI1L2_ARATH2.082e-4878.70Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
GI1L1_ARATH1.349e-4777.98Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
GID1_ORYSJ7.421e-3862.28Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665212 ID=EY665212; Name=EY665212; organism=Citrus sinensis; type=EST; length=1108bp
TAATTTATTAGGGCGCTGCGGACGGGTCCGGATTCCGGGTCGACCCCGCG
TCCGATGGAAAATATTTTGTCACTGTCCAAGATCGGGACTGGTATTGGAG
AGCTTATCTTCCTGAAGGAGCAGATAGGGATCATCCGGCATGTAATCCAT
TTGGTCCAAAAGGTATAGATCTTGTAGGAGTGAAATTCCCTAAGAGTCTT
GTTGTGGTAGCTGGTTTGGATCTCATTCAGGACTGGCAACTAGCTTACAT
GGAAGGCCTGAAGAAGGCTGGCCAAGATGTAAAACTTCTATATCTGGAGC
AGGCAACTATCGGGTTCTATTTCTTGCCTAATAACGGTCACTTCTACACA
GTCATGGACGAGATAAGTAATTTTGTGAGTTGTAACTATTGATATGCTTA
ACTTTTACCAATGGGCAGTCGACCACACAGAAGCTTTAGATTGCACTTGG
GGCTAATCAAAGGTTGTTTGCAGTTTATATAGTTGTCTAGTATTATGCTA
TTCTGTTTTAACTAATTGTGGGTGAGGTTCTACTAAAAGGTGCCTGAATC
CAATTTCTAAAAATGAATTTAGATGGAGGCCACTCGGTTATCCAGGGCCC
AGAAAAATTTTATTCCGGCACCTAACTGGGAAGGTGAATGGGGTTCTGGT
TATTAATGGCATTCATCCTAGAACGGGGGGGAAATTAATTCAAATGAATC
TTTTATAGGGCAGCCTGGAAACGGGTTTGAAACAAAATTAGGAAAAACAC
ATAAAAATTTTGGAAAAGGGGCTGCCCCACAACCCCCTCACCCCCATAGG
GGGAAAAAGAAAAAAATATAAAAATAGGTCGTAAAAAAAAATTTGGTGGG
GGCACATAAAATAATTGAGTTTAAGAGATTACGAGGATTGTAATATTTAA
ATATAAACTGAATTTTTAAAGAACAAACATTGAGGAATGGGGAAATTCAA
TCTTGGAGTTGGGTGGGGGGGGGGGACTGAGTAAGTATGTGGAAGGGAAA
GTGGAGACGGTGATGTTATTAATATGAGCAATAATCAAAGATGTAAAAAT
CAAGTAGGCTATGGATTCCCCAAAAGGTCTGAAGTCAGTTGATTATTAAC
GTGATACT
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