EY665202

Overview
NameEY665202
Unique NameEY665202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.645e-41
Identity = 87/137 (63.50%), Postives = 101/137 (73.72%), Query Frame = 2
Query:   65 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            +A V DFCVAD K  D PAGY C  PA VT +DFV+SGLG+AGNTT+II AAVTPAF AQFP VNGLG+SLARLDL  GGVIP HTHP ASE+LLVV G I AGF++S     L  + L++    +FPQG+L F  N
Sbjct:   17 HASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASDNTPYL--KTLKKGDIMVFPQGLLHFQVN 151          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.806e-41
Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 2
Query:   65 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNN 520
            NA V DFCVA+LK +++PAGYPC+ P  V A DFVFSGLG  GNTT+IINAAVTPAF AQFP +NGLGLS ARLDLA  GVIP+HTHP ASE+L V+ G ITAGF+SS+  + +  + L+     +FPQG+L F  N   +   S  V FN+
Sbjct:   16 NASVQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSSA--NAVYVQTLKPGQVMVFPQGLLHFQIN-AGKSSASAVVTFNS 164          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.806e-41
Identity = 85/137 (62.04%), Postives = 101/137 (73.72%), Query Frame = 2
Query:   65 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            +A V DFCVAD K  D PAGY C  PA+VT +DFV+SGLG+AGNTT+I  AAVTPAF AQFP VNGLG+SLARLDL  GGV+P HTHP ASE+LLVV G I AGF++S     L  + L++    +FPQG+L F  N
Sbjct:   17 HASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASDNTPYL--KTLKKGDIIVFPQGLLHFQVN 151          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 9.027e-40
Identity = 83/137 (60.58%), Postives = 100/137 (72.99%), Query Frame = 2
Query:   65 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            NA V DFCVADL   + PAG+ C  PA V  +DFVFSGLG+AGNT++II AAVTPAFVAQFP VNGLG+S+ARLDLA GGV+P HTHP ASE+L+V  G I AGF++S     L  + L +    +FPQG+L F  N
Sbjct:   22 NAAVQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASDNTPYL--QTLEKGDIMVFPQGLLHFQVN 156          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.953e-38
Identity = 84/137 (61.31%), Postives = 103/137 (75.18%), Query Frame = 2
Query:   65 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            N  V DFCVA+LK +++PAGYPC+ P  V A DFVFS LG  GNTT+II+AAVTP FVAQFPA+NGLG+S ARLDLA  GVIP+HTHP ASE+L V+ G ITAGFISS+  + +  + L+     +FPQG+L F  N
Sbjct:   16 NDSVQDFCVANLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISSA--NSVYVQTLKPGQVMVFPQGLLHFQIN 149          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.449e-38
Identity = 87/152 (57.24%), Postives = 107/152 (70.39%), Query Frame = 2
Query:   68 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSV-FVAFNN 520
            A V DFCVAD K   SP+GY C  P  VT +DF F+GLG AGNT++II AAVTPAF   +  +NGLG+SLARLDLA GGVIP+HTHP ASE+L+V+ G I AGFISS+ K  L  + L R  S +FPQG+L F  N    + P++ FVAF +
Sbjct:   20 ASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSANKVYL--KTLNRGDSMVFPQGLLHFQLN--SGKGPALAFVAFGS 167          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.458e-37
Identity = 82/152 (53.95%), Postives = 103/152 (67.76%), Query Frame = 2
Query:   68 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSVFVAFNNP 523
            A+  DFCVADL  SD+PAGYPC   A V A DF + GL  AGNT+++I AAVTPAFV QFP VNGLG+S ARLD+A GGV+P+HTHPAASE+L V  G + AGFI+SS+     +     +I  +FPQG+L +  N   +      VAF+ P
Sbjct:   23 ALTQDFCVADLTCSDTPAGYPC--KASVGAGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSSSNTVYTRTLYAGDIM-VFPQGLLHYQYN-AGQSAAVALVAFSGP 170          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.220e-36
Identity = 86/152 (56.58%), Postives = 106/152 (69.74%), Query Frame = 2
Query:   68 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSNFRCEREPSV-FVAFNN 520
            A V DFCVAD K   +P+GY C  P  VT +DF FSGLG AGNT+++I AAVTPAF   F  +NGL +SLARLDLA GGVIP+HTHP ASE+L+V+ G I AGFISS+ K  L  + L R  S +FPQG+L F  N    + P++ FVAF +
Sbjct:   20 ASVQDFCVADPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSANKVYL--KTLSRGDSMVFPQGLLHFQLN--SGKGPALAFVAFGS 167          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.544e-34
Identity = 83/135 (61.48%), Postives = 97/135 (71.85%), Query Frame = 2
Query:   65 NAMVNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLF 466
            NA VNDFCVA+     D+P+G+ C   A VTA DFV+SGL   GNTT+IINAAVTPAFV QFP V GLG++LARLDLA GGVIP+HTHP ASEIL VV G I A FISS  K  + ++ L      +FPQG+L F
Sbjct:   21 NASVNDFCVANGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISSGNK--VYEKALYPGDVMVFPQGLLDF 153          
BLAST of EY665202 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.766e-27
Identity = 66/137 (48.18%), Postives = 87/137 (63.50%), Query Frame = 2
Query:   68 AMVNDFCVADLKL-SDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPIHTHPAASEILLVVHGCITAGFISSSAKHCLRKRRLRREIS*IFPQGVLLFSSN 475
            A+  DFCVA+L L +D+P+GY C P A VTA DF    L   G      N ++  AFV Q+PAVNGLG+S +R+D+  GGV+P+HTHPA SE+L V+ G + AGFISSS      K   +  +  +FPQG+L F  N
Sbjct:   26 ALTQDFCVANLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSSDNKVYYKEVSKGGMF-VFPQGLLHFQYN 161          
The following BLAST results are available for this feature:
BLAST of EY665202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
AB19A_PRUPE1.645e-4163.50Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL31_ARATH2.806e-4159.21Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
AB19B_PRUPE2.806e-4162.04Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
ABP20_PRUPE9.027e-4060.58Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GLP1_BRANA4.953e-3861.31Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GL33_ARATH8.449e-3857.24Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GL814_ORYSJ2.458e-3753.95Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GLP1_SINAL1.220e-3656.58Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GLP1_IPONI2.544e-3461.48Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL813_ORYSJ1.766e-2748.18Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-083-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665202 ID=EY665202; Name=EY665202; organism=Citrus sinensis; type=EST; length=1003bp
CTAAATATTAGTCAAAATGCTTCACATTCTCTTCTTCTTCCTTGCTTTCG
TATCCTCTTCCTCCAATGCTATGGTTAACGACTTCTGCGTCGCTGACCTA
AAGCTGTCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCCCGCTATGGT
TACCGCTGACGACTTCGTATTTTCGGGCCTCGGCGTGGCCGGAAACACCA
CGAGCATTATCAACGCGGCAGTGACACCTGCATTTGTAGCTCAATTTCCG
GCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTAGATCTTGCAAAGGG
TGGCGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAAATCCTTCTTG
TTGTGCATGGCTGCATAACTGCCGGGTTCATTTCCTCTTCAGCTAAACAC
TGTTTACGTAAAAGACGCTTAAGAAGGGAGATATCATGAATCTTTCCACA
AGGGGTGTTGCTTTTTTCAAGTAATTTCCGGTGCGAACGGGAACCCTCGG
TTTTTGTAGCCTTCAACAACCCGAAATCCCTGGAATTCCCAATCCCCGAA
TTTCCCCCTTTTTTGCTAAAAACTTGGTCCTCCCCATTTGGGGTGGAGAA
CAAAACCACTTTCCCTTGAAAATAGCAAGGGGGAAAAAGGGCTCAAGGGC
ATAACCCTTTGGGGGGGCCCCGGGCAGGGGGTTATTAATTTACAAAAATT
TACTTTCATTTTGGGAGGTTTTGGAGGACCTAAATTTTCCCTTTAAACTT
GCCAAAGGGGTTTTGGGATTGGGGGGGAAAATTCCACAAAAATATGAAAT
TTTTTCTGGTTACCCCCACCTTCCCCCCCCATGCTTTTTTCTCCCTGGAG
AAAAAAAAAAACAAAAATTTTTTCCTCCCTCAAAAAAAAATAAAAAAAAA
AAAAAAAGGGGGGGGAGGGGCCGCTGCCTCATCAGGAGAGAAGTTCGCCC
AAAGTGACCTTATTTAAGATTGAAAGCGCGGGGAGGGGGGGGGGGGGTCG
CAG
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