EY665155

Overview
NameEY665155
Unique NameEY665155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 5.680e-85
Identity = 155/190 (81.58%), Postives = 176/190 (92.63%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581
            LSS TM IP+GV +K+NAK+IEVEGPRGKL R+FKHLNLDF L+TD E GK+KLKIDAWFGSRKTSAAIRTALSHV+NLITGVTKG+RYKMRFVYA FPINASI N +KSIEIRNFLGEKKVR+V++LDGV+++RS+KVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEKG +V E+
Sbjct:    5 LSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITD-ENGKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGAVVVEE 193          
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3)

HSP 1 Score: 310.071 bits (793), Expect = 1.071e-83
Identity = 151/190 (79.47%), Postives = 173/190 (91.05%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581
            LSS TM+IP+ V +K++AK+IEVEGPRGKL R+FKHLNLDF L+ D ETGK+KLKID+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNFLGEKKVR+VEMLDGVT++RS+KVKDE++LDGNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEK  IV E+
Sbjct:    5 LSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE 194          
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3)

HSP 1 Score: 306.22 bits (783), Expect = 1.547e-82
Identity = 150/186 (80.65%), Postives = 172/186 (92.47%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTI 569
            L+S TMEIPEGV V++ AK++ VEGPRGKL+RNFKHLNLDF L+  G    RKL++DAWFG+R+T AAIRTA+SHVQNLITGVTKGYRYKMRFVYAHFPINASI N++ +IEIRNFLGEKKVR+V+ML+GVT+LRS+KVKDEL+LDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVS+KGTI
Sbjct:    5 LASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGG----RKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTI 186          
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.020e-82
Identity = 150/190 (78.95%), Postives = 172/190 (90.53%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581
            LSS TM+IP+GV +K+NAK+IEVEGPRGKL+R+FKHLNLDF L+ D  TGKR+LKID+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI   +KSIEIRNFLGEKKVR+VEMLDGV ++RS+KVKDE+IL+GNDIELVSRS ALINQKCHVK KDIRKFLDGIYVSEKG I  E+
Sbjct:    5 LSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGKIAVEE 194          
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.591e-55
Identity = 109/187 (58.29%), Postives = 134/187 (71.66%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIV 572
            LS+ T++IP+ V V +  + + V+GPRG L R F H+NL+  L+   +   +KL++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDEL+L+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEKGT+V
Sbjct:    5 LSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKKQ---KKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVV 188          
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 8.000e-55
Identity = 106/186 (56.99%), Postives = 138/186 (74.19%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTI 569
            +++  ++IPEG+ V + ++++ V+GPRG L RNFKHL +D  ++       R LK++ WFGS+K  AA+RT  SHV+N+I GVTKG++YKMR VYAHFPIN      +  IEIRNFLGEK +RRV+M  GVTV+ S K KDELI++GN +E VS SAALI Q   VKNKDIRKFLDG+YVSEK T+
Sbjct:    5 VANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-----RVLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 185          
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.365e-54
Identity = 109/190 (57.37%), Postives = 136/190 (71.58%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581
            LS+ T++IPE V++ +  + + V+GPRG L R+F H+N++  L+      K++L++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEKGT+   D
Sbjct:    5 LSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191          
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.782e-54
Identity = 110/190 (57.89%), Postives = 135/190 (71.05%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581
            LS+ T++IPE V + +  + + V+GPRG L R+F H+N++  L+      K++L++D W+G+RK  A IRT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEKGT+   D
Sbjct:    5 LSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191          
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.782e-54
Identity = 109/190 (57.37%), Postives = 135/190 (71.05%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581
            LS+ T++IPE V + +  + + V+GPRG L R+F H+N++  L+      K++L++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEKGT+   D
Sbjct:    5 LSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQAD 191          
BLAST of EY665155 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.328e-54
Identity = 109/190 (57.37%), Postives = 135/190 (71.05%), Query Frame = 3
Query:   12 LSSXTMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGED 581
            LS+ T++IPE V + +  + + V+GPRG L R+F H+N++  L+      K++L++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDELIL+GNDIELVS SAALI Q   VKNKDIRKFLDGIYVSEKGT+   D
Sbjct:    5 LSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQPD 191          
The following BLAST results are available for this feature:
BLAST of EY665155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
RL9_PEA5.680e-8581.5860S ribosomal protein L9 OS=Pisum sativum GN=RPL9 ... [more]
RL91_ARATH1.071e-8379.4760S ribosomal protein L9-1 OS=Arabidopsis thaliana... [more]
RL9_ORYSJ1.547e-8280.6560S ribosomal protein L9 OS=Oryza sativa subsp. ja... [more]
RL92_ARATH2.020e-8278.9560S ribosomal protein L9-2 OS=Arabidopsis thaliana... [more]
RL9_ICTPU3.591e-5558.2960S ribosomal protein L9 OS=Ictalurus punctatus GN... [more]
RL9_SPOFR8.000e-5556.9960S ribosomal protein L9 OS=Spodoptera frugiperda ... [more]
RL9_MOUSE1.365e-5457.3760S ribosomal protein L9 OS=Mus musculus GN=Rpl9 P... [more]
RL9_MACFA1.782e-5457.8960S ribosomal protein L9 OS=Macaca fascicularis GN... [more]
RL9_BOVIN1.782e-5457.3760S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=... [more]
RL9_RAT2.328e-5457.3760S ribosomal protein L9 OS=Rattus norvegicus GN=R... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665155 ID=EY665155; Name=EY665155; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGCTTTCTTCANAGACGATGGAGATCCCAGAGGGGGTGAAA
GTAAAGATAAATGCGAAGATAATAGAAGTAGAGGGACCTAGAGGTAAGCT
TAGCCGCAATTTCAAGCATTTGAACCTAGACTTCCATCTCATGACTGATG
GGGAAACTGGGAAGCGGAAGCTGAAGATCGACGCATGGTTTGGGTCTCGC
AAGACCAGTGCCGCCATCAGAACTGCCCTCAGCCATGTACAGAACCTCAT
CACTGGGGTTACCAAGGGCTACCGTTACAAGATGAGATTCGTCTACGCTC
ACTTTCCCATCAACGCCTCCATCGCCAACGCTGACAAGTCCATTGAGATC
CGTAACTTTCTAGGAGAAAAGAAGGTTCGAAGAGTGGAAATGCTTGACGG
TGTTACCGTTCTTCGGTCTGACAAGGTTAAGGATGAACTCATTCTTGATG
GGAATGACATTGAACTTGTGTCGCGGTCCGCTGCTTTGATCAATCAGAAA
TGCCATGTGAAGAACAAAGATATCAGGAAATTCTTAGACGGGATCTATGT
CAGTGAGAAGGGCACAATTGTTGGAGAGGATTAGTTAGCTTTCAAATTTT
ATGTCACATTATTATCATGAAATTGGTATTAATCTTGCTCTTTTTGCCCT
GTGTTGGGGAAGTCCTTTTTTTTTCGTTTGGAAATTTGGTATTAGAGAGT
TTTAGATTTCTGCTTCACTCCATGTACCTTTTGTCCATATGTATCAAATG
GATTTTATACCTATTTGCCTGCCAATGTTGATCCGTATCTACTTTGGTGG
AGTTGGCATGATTTCTTGATACTAGTAATCCAATTCGTATTACTTATTTT
ATTGCAAAAAAAAAAAAAAGGGC
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