EY665144

Overview
NameEY665144
Unique NameEY665144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665144_ssr768 microsatellite EY665144_ssr768:768..779. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7999 contig Csv1_Contig7999:1..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY665144 vs. ExPASy Swiss-Prot
Match: Y4966_ARATH (Uncharacterized protein At4g29660 OS=Arabidopsis thaliana GN=EMB2752 PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.695e-37
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 3 
Query:  330 SYLWRKYADYVYTKWERTLIWDMIEPYRRPKSFTPLVSIYVAAFYTGVIAAAINEQLYKEKYWEDHPGEAVPLMRPTFYGGPWKVYKGDTL 602
            S LWRKYADY Y K+ER  +W+MIEPYRRPK+FT L++IYVAAFYTGVI AA+ EQLYKEK+WE+HPG+ VPLM+P FY GPW+VY+G+ +
Sbjct:    6 SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYKEKFWEEHPGKTVPLMKPVFYRGPWRVYRGEAI 96
The following BLAST results are available for this feature:
BLAST of EY665144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4966_ARATH7.695e-3770.33Uncharacterized protein At4g29660 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-E10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665144 ID=EY665144; Name=EY665144; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGCTCCAAAGCGCTCCGAAGTCCAAACGCAATCCTGCAGCG
TGAATTGACACCCGCTGCTGAGTTGCGCCGCCGCTTCACGGCTGTCACCA
CTGACCTTCAAAAGCTTCATTTACGGCAGACAGTGGATAATTTTGGTGCG
TTTTTTGCTGAAAAATATTATAAAGATTTGGTTGGTATTTGCTAAAAAAA
TAATTATCCAATTTCATTTACTTGAGATATGGTAGGCAGCTTAGGTGGCG
GGACATAGGGTTTATTGAGGGGCCGTCCAAGGGCAGTGTGGGTGGCAGCG
GAAGTCAAAGGGGGAGGTTGGAAATGGCGAGTTACTTATGGAGAAAATAC
GCGGACTATGTGTACACAAAGTGGGAAAGAACACTAATTTGGGACATGAT
AGAGCCCTACAGAAGACCCAAATCTTTCACACCCCTTGTCAGTATCTATG
TTGCTGCTTTCTACACTGGTGTGATTGCCGCTGCTATTAACGAGCAACTC
TACAAGGAGAAGTATTGGGAAGATCACCCTGGTGAAGCTGTGCCGCTCAT
GCGGCCAACATTTTATGGTGGTCCCTGGAAGGTTTACAAGGGGGATACCC
TGCCGCAAAAATGTGAATTGGAGTCGTGTTGAAGCTACTTCCTTTCTACT
TGTGTTTATTGGACAAAGGTCACAGGTTTTGGGTGGTACGTANTGATCAA
ATATTTATTCTGGGTAAAAAATACTTTCANGTCGGAATGATGCATANCCA
GTGAGAGCGGAAAAATAAAAGAAAGAAAGCTTCATCCCCAATTGAATATG
TAGCCCTATGAGAACCCTTGGTGGTCTGTGAGATCAAAAGAGATGCTCTG
ACTTTGATTGGGGATGCTCCATTTTGTGAAATGAA
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