EY665132

Overview
NameEY665132
Unique NameEY665132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665132_ssr17 microsatellite EY665132_ssr17:17..32. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12578 contig Csv1_Contig12578:123..1026. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: SC5D1_ARATH (Delta(7)-sterol-C5(6)-desaturase 1 OS=Arabidopsis thaliana GN=STE1 PE=1 SV=2)

HSP 1 Score: 392.119 bits (1006), Expect = 4.233e-113
Identity = 180/242 (74.38%), Postives = 196/242 (80.99%), Query Frame = 1
Query:   67 AMGDDYLQLFVDETTLYNRIVLANLLPFKWWDPLPHVLQTWLRNYIAGTLLYLVSGLLWCFYVYYLKRNVYVPKDDIPTRKAMLLQIFVAMKAMPWYVGLPTVSEYMIENGWTKCFARISDIGWFAXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHDCIHGKLWPWMGAGYHTIHHT 792
            A  + YL  FVDET+ YNRIVL++LLP   W+PLPH LQTWLRNY+AGTLLY +SG LWCFY+YYLK NVY+PKD IPT KAM LQ+FVAMKAMPWY  LPTVSE MIE GWTKCFA I + GW              EFGIYWMHRELHDIK LYK+LHATHHIYNKQNTLSPFAGLAFHP+DGIL A+PHVIALFIVP HFTTH+ LLF  AIWT NIHDCIHG +WP MGAGYHTIHHT
Sbjct:    2 AADNAYLMQFVDETSFYNRIVLSHLLPANLWEPLPHFLQTWLRNYLAGTLLYFISGFLWCFYIYYLKINVYLPKDAIPTIKAMRLQMFVAMKAMPWYTLLPTVSESMIERGWTKCFASIGEFGWILYFVYIAIYLVFVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPVDGILQAVPHVIALFIVPIHFTTHIGLLFMEAIWTANIHDCIHGNIWPVMGAGYHTIHHT 243          

HSP 2 Score: 37.3502 bits (85), Expect = 4.233e-113
Identity = 16/25 (64.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  785 TTHIPTY---YGHYTIWMDWMLXTL 850
            T H  TY   YGHYTIWMDWM  +L
Sbjct:  239 TIHHTTYKHNYGHYTIWMDWMFGSL 263          
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: SC5D_TOBAC (Delta(7)-sterol-C5(6)-desaturase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 9.405e-113
Identity = 171/238 (71.85%), Postives = 197/238 (82.77%), Query Frame = 1
Query:   76 DDYLQLFVDETTLYNRIVLANLLPFKWWDPLPHVLQTWLRNYIAGTLLYLVSGLLWCFYVYYLKRNVYVPKDDIPTRKAMLLQIFVAMKAMPWYVGLPTVSEYMIENGWTKCFARISDIGWFAXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHDCIHGKLWPWMGAGYHTIHH 789
            +DYL+ FV+ET+ YNR+VL   +P  WW PLPH+LQ WLRNYI G LLY +SG LWCFY+Y+LKRNVY+PKD IP+ KAMLLQI VAMKAMPWY  LP++SEYMIENGWTKCFARISD+GW +            EFGIYWMH ELHDIK LYK+LHATHHIYNKQNTLSPFAGLAFHPLDGIL A+PHV+AL +VP HF+TH+ L+F  A+WT NIHDCIHGK++P MGAGYHTIHH
Sbjct:    2 EDYLKQFVEETSFYNRLVLGTFMPESWWGPLPHMLQGWLRNYIGGVLLYFISGFLWCFYIYHLKRNVYIPKDAIPSNKAMLLQISVAMKAMPWYCALPSLSEYMIENGWTKCFARISDVGWLSYVIYAAIYLVIVEFGIYWMHMELHDIKPLYKYLHATHHIYNKQNTLSPFAGLAFHPLDGILQAVPHVVALLLVPMHFSTHIALIFLEALWTANIHDCIHGKVFPVMGAGYHTIHH 239          

HSP 2 Score: 38.5058 bits (88), Expect = 9.405e-113
Identity = 17/25 (68.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  785 TTHIPTY---YGHYTIWMDWMLXTL 850
            T H  TY   YGHYTIWMDWM  TL
Sbjct:  236 TIHHRTYRHNYGHYTIWMDWMFGTL 260          
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: SC5D2_ARATH (Putative Delta(7)-sterol-C5(6)-desaturase 2 OS=Arabidopsis thaliana GN=HDF7 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 1.615e-109
Identity = 169/238 (71.01%), Postives = 191/238 (80.25%), Query Frame = 1
Query:   79 DYLQLFVDETTLYNRIVLANLLPFKWWDPLPHVLQTWLRNYIAGTLLYLVSGLLWCFYVYYLKRNVYVPKDDIPTRKAMLLQIFVAMKAMPWYVGLPTVSEYMIENGWTKCFARISDIGWFAXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHDCIHGKLWPWMGAGYHTIHHT 792
            DY    V+ET+ YNR+VL++LLP   W+PLPH LQTWLRNY+AG +LY +SG LWCFY+YYLK NVYVPK+ IPTRKAMLLQI+VAMKAMPWY  LP VSEYMIE+GWTKC++ +    WF             EF IYW+H+ELHDIKFLYKHLHATHH+YNKQNTLSPFAGLAFHPLDGIL A+PHVIALFIVP H  THL LLF   IWT +IHDCIHG +WP MGAGYHTIHHT
Sbjct:    7 DYNDQIVNETSFYNRMVLSHLLPVNLWEPLPHFLQTWLRNYLAGNILYFISGFLWCFYIYYLKLNVYVPKESIPTRKAMLLQIYVAMKAMPWYTLLPAVSEYMIEHGWTKCYSTLDHFNWFLCFLYIALYLVLVEFMIYWVHKELHDIKFLYKHLHATHHMYNKQNTLSPFAGLAFHPLDGILQAIPHVIALFIVPIHLITHLSLLFLEGIWTASIHDCIHGNIWPIMGAGYHTIHHT 244          

HSP 2 Score: 37.3502 bits (85), Expect = 1.615e-109
Identity = 16/25 (64.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  785 TTHIPTY---YGHYTIWMDWMLXTL 850
            T H  TY   YGHYTIWMDWM  +L
Sbjct:  240 TIHHTTYKHNYGHYTIWMDWMFGSL 264          
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: SC5D_MOUSE (Lathosterol oxidase OS=Mus musculus GN=Sc5dl PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.727e-19
Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = 1
Query:  322 QIFVAMKAMPWYVGLPTVSEYMIE-NGWTKCFARISDI--GWFAXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHD---CIHGKLWPWM-GAGYHTIHHTHTDILWSLY 819
            +I   +K++PW + +PTVS +++E  G++K +  I D   GW              +  IY +HR LH  + +YK +H  HHI+      +PFA  AFHP+DG L +LP+ I  F+ P H   +L L     +WT +IHD    +   L P++ G+ +HT HH   D  +  Y
Sbjct:   76 EIVFTVKSLPW-ISIPTVSLFLLELRGYSKLYDDIGDFPNGWIHLMVSVVSFLFFTDMLIYRIHRGLHH-RLVYKRIHKPHHIWKIP---TPFASHAFHPVDGFLQSLPYHIYPFVFPLHKVVYLGLYVLVNVWTISIHDGDFRVPQILRPFINGSAHHTDHHMFFDYNYGQY 243          
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: SC5D_HUMAN (Lathosterol oxidase OS=Homo sapiens GN=SC5DL PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.270e-18
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 1
Query:  322 QIFVAMKAMPWYVGLPTVSEYMIE-NGWTKCFARISDI--GWFAXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHD---CIHGKLWPWM-GAGYHTIHHTHTDILWSLY 819
            +I   ++A+PW + + TV+ +++E  G++K    + +   G F             +  IYW+HR LH  + +YK LH  HHI+      +PFA  AFHP+DG L +LP+ I  FI P H   +L L     IWT +IHD    +   L P++ G+ +HT HH   D  +  Y
Sbjct:   76 EIKFTVQALPW-ISILTVALFLLEIRGYSKLHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHH-RLVYKRLHKPHHIWKIP---TPFASHAFHPIDGFLQSLPYHIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQILQPFINGSAHHTDHHMFFDYNYGQY 243          
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: ERG3_YEAST (C-5 sterol desaturase OS=Saccharomyces cerevisiae GN=ERG3 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.558e-15
Identity = 69/225 (30.67%), Postives = 110/225 (48.89%), Query Frame = 1
Query:  133 ANLLPFKWWDPLPHVLQTWLRNYIAGTLLYLVSGLLWCFYVYYLKRNVYVPKDDIPTRKAMLLQIFVAMKAMPWYVGLPTVSEYMIE-NGWTKCFARIS--DIGWFAXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHDCIHGKLWPWM-GAGYHTIHHTH 795
            A+LLP      L   L  W+   I G LLYL +  L   YV+   ++++     +  + AM  +I +A+ A+PW + + TV  +++E NG +K + +I   + G               + G+Y  HR LH  + +Y+ LH  HH   K    +PFA  +FHP+DG L ++ + I   I+P H  ++L L      WT  IHD  +    P + G   HT+HH +
Sbjct:   81 ASLLPRS--SILREFLSLWVIVTIFGLLLYLFTASL--SYVFVFDKSIFNHPRYLKNQMAM--EIKLAVSAIPW-MSMLTVPWFVMELNGHSKLYMKIDYENHGVRKLIIEYFTFIFFTDCGVYLAHRWLHWPR-VYRALHKPHH---KWLVCTPFASHSFHPVDGFLQSISYHIYPLILPLHKVSYLILFTFVNFWTVMIHDGQYLSNNPAVNGTACHTVHHLY 294          
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: ERG3_ASHGO (C-5 sterol desaturase OS=Ashbya gossypii GN=ERG3 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 76/275 (27.64%), Postives = 125/275 (45.45%), Query Frame = 1
Query:   55 SKSPAMGDDYLQLFVDE-----TTLYNR-----IVLANLLPFKWWDPLPHVLQTWLRNY--------------IAGTLLYLVSGLLWCFYVYYLKRNVYVPKDDIPTRKAMLLQIFVAMKAMPWYVGLPTVSEYMIE-NGWTKCFA--RISDIGWFAXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHDCIHGKLWPWM-GAGYHTIHHTH 795
            S SP MG  + Q  + E     T ++ R     + +    PF + +  PH   + L  Y              + G LLYL+       YV+   ++V+     +  +  M ++I   + A+P Y+ + TV  +++E +G++  +    ++  G+              +FGIY +HR LH    +YK LH  HH   K    +PFA  AFHP+DG L +LP+ +   + P H  ++L L     +WT  IHD  +    P + GA  HT+HH +
Sbjct:   24 SLSPKMGGTWQQAMIKEQMVNATRVFGRSLERPLEVYGYAPFMF-EVSPHAFGSVLPRYSLLRQSLSLFLVTTVFGWLLYLIVASF--SYVFVFDKSVFNHPRYL--KNQMSMEIKQGLGAIP-YMAVMTVPWFLLELHGYSHLYMGLELNVRGYVRLALKALFFILFTDFGIYLLHRWLH-WPAVYKVLHKKHH---KWLVCTPFASHAFHPIDGYLQSLPYHLFPMLFPLHKVSYLVLFTFVNVWTVMIHDGEYLSNDPVINGAACHTVHHLY 288          
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: ERG3_CANGA (C-5 sterol desaturase OS=Candida glabrata GN=ERG3 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.460e-14
Identity = 67/210 (31.90%), Postives = 100/210 (47.62%), Query Frame = 1
Query:  187 WLRNYIAGTLLYLVSGLLWCFYVYYLKRNVYVPKDDIPTRKAMLLQIFVAMKAMPWYVGLPTVSEYMIE-NGWTKCFARISDIGWF-----AXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHDCIHGKLWPWM-GAGYHTIHHTH 795
            W    + G LLYL++  L   YV+   R ++     +  +  M L+I +A+ A+P  + L TV  +M+E NG++K +    D+ W                   + GIY  HR LH  + +YK LH  HH   K    +PFA  AFHP+DG   +L + I   I+P H  ++L L      W+  IHD  H    P + G   HT+HH +
Sbjct:   98 WAVVTVFGLLLYLITASL--SYVFVFDRTIFNHPKYL--KNQMYLEIKLAVSAIPT-MSLLTVPWFMLELNGYSKLYY---DVDWEHHGLRKLLIEYATFIFFTDCGIYLAHRWLHWPR-VYKALHKPHH---KWLVCTPFASHAFHPVDGYFQSLSYHIYPMILPLHKISYLILFTFVNFWSVMIHDGQHMSNNPVVNGTACHTVHHLY 295          
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: ERG3_CANAL (C-5 sterol desaturase OS=Candida albicans GN=ERG3 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14
Identity = 75/256 (29.30%), Postives = 111/256 (43.36%), Query Frame = 1
Query:   49 YRSKSPAMGDDYLQLFVDETTLYNRIVLANLLPFKWWDPLPHVLQTWLRNYIAGTLLYLVSGLLWCFYVYYLKRNVYVPKDDIPTRKAMLLQIFVAMKAMPWYVGLPTVSEYMIE-NGWTKCFARISDI--GWFAXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHDCIHGKLWP----WMGAGYHTIHHTH 795
            Y+ KS   G      F   T   N   LA    F+        L  ++   I G LLY +   L   YV+   + ++     +  +  M L+I  A  A+P  V L T+  +++E NG++  +  I++   G+ A            + GIY++HR LH    +YK LH  HH   K    +PFA  AFHP+DG   +LP+ +   + P H   +L L      WT  IHD   G  W       G   HT+HH +
Sbjct:   85 YQDKSEIYG--LAPKFFPATDFINTSFLARSNIFR------ETLSLFIITTIFGWLLYFIVAYL--SYVFVFDKKIFNHPRYL--KNQMSLEIKRATTAIPVMV-LLTIPFFLLELNGYSFLYLDINECTGGYKAILWQIPKFILFTDCGIYFLHRWLH-WPSVYKVLHKPHH---KWIVCTPFASHAFHPVDGFFQSLPYHLYPLLFPLHKVLYLFLFTFVNFWTVMIHD---GSYWSNDPVVNGTACHTVHHLY 320          
BLAST of EY665132 vs. ExPASy Swiss-Prot
Match: ERG32_SCHPO (Probable C-5 sterol desaturase 2 OS=Schizosaccharomyces pombe GN=SPBC27B12.03c PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14
Identity = 60/208 (28.85%), Postives = 99/208 (47.60%), Query Frame = 1
Query:  187 WLRNYIAGTLLYLVSGLLWCFYVYYLKRNVYVPKDDIPTRKAMLLQIFVAMKAMPWYVGLPTVSEYMIE-NGWTKCFARISDIGWFAXXXXXXXXXXXXEFGIYWMHRELHDIKFLYKHLHATHHIYNKQNTLSPFAGLAFHPLDGILXALPHVIALFIVPTHFTTHLXLLFPRAIWTTNIHDCIHGKLWP----WMGAGYHTIHHTH 795
            +L  +I GTL Y +S   + +YVY+ +         +  ++   L++ VA+K +P  + + T   ++ E  G+   + ++ + G+F             +F IYW+HR LH  ++LY  LH  HH   K    +P++  AFH LDG   +LP+ +  F  P +   +L L      WT  IHD   GK +       GA +H  HH +
Sbjct:   68 FLITWIMGTLSYFLSAS-FAYYVYFDREEARRHPKFLKNQEH--LELMVALKNLPG-MAILTAPWFLAEIRGYGYVYDKLDEYGYFYLFFSIALFLLFSDFLIYWIHRALHH-RWLYAPLHKLHH---KWIVPTPYSSHAFHYLDGYSQSLPYHMFPFFFPLNKYVYLLLFGSVNYWTVLIHD---GKYFSNNAVVNGAAHHAAHHMY 264          
The following BLAST results are available for this feature:
BLAST of EY665132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
SC5D1_ARATH4.233e-11374.38Delta(7)-sterol-C5(6)-desaturase 1 OS=Arabidopsis ... [more]
SC5D_TOBAC9.405e-11371.85Delta(7)-sterol-C5(6)-desaturase OS=Nicotiana taba... [more]
SC5D2_ARATH1.615e-10971.01Putative Delta(7)-sterol-C5(6)-desaturase 2 OS=Ara... [more]
SC5D_MOUSE5.727e-1934.10Lathosterol oxidase OS=Mus musculus GN=Sc5dl PE=2 ... [more]
SC5D_HUMAN8.270e-1834.10Lathosterol oxidase OS=Homo sapiens GN=SC5DL PE=1 ... [more]
ERG3_YEAST8.558e-1530.67C-5 sterol desaturase OS=Saccharomyces cerevisiae ... [more]
ERG3_ASHGO1.118e-1427.64C-5 sterol desaturase OS=Ashbya gossypii GN=ERG3 P... [more]
ERG3_CANGA1.460e-1431.90C-5 sterol desaturase OS=Candida glabrata GN=ERG3 ... [more]
ERG3_CANAL9.462e-1429.30C-5 sterol desaturase OS=Candida albicans GN=ERG3 ... [more]
ERG32_SCHPO9.462e-1428.85Probable C-5 sterol desaturase 2 OS=Schizosaccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665132 ID=EY665132; Name=EY665132; organism=Citrus sinensis; type=EST; length=902bp
CCACGCGTCCGGCAGACTCTCTCTCTCTCTCTTTCTCTCTTTTTTTTTTA
TCGGTCCAAATCGCCGGCGATGGGCGACGATTATCTGCAGCTGTTCGTGG
ACGAGACCACTTTGTACAACCGCATCGTGTTGGCCAACTTGTTACCCTTC
AAATGGTGGGACCCTCTTCCTCACGTTTTGCAGACGTGGCTTCGTAACTA
CATTGCCGGAACTCTTCTCTACTTAGTTTCTGGCCTCTTGTGGTGCTTCT
ATGTCTACTACTTGAAACGCAACGTTTATGTCCCTAAAGATGACATCCCT
ACTAGAAAAGCTATGCTGTTGCAGATATTTGTTGCTATGAAGGCGATGCC
ATGGTACGTTGGCCTTCCAACTGTTTCTGAGTACATGATTGAAAATGGCT
GGACAAAGTGTTTTGCCAGAATAAGTGACATTGGTTGGTTTGCTTACCTG
GTCTATTTGGTTATTTACCTTGTGCTTGTCGAGTTTGGGATTTACTGGAT
GCACAGAGAATTGCATGACATAAAGTTTCTTTATAAGCATCTTCATGCAA
CCCACCATATATACAACAAGCAGAATACCCTTTCTCCATTTGCTGGTTTG
GCATTTCACCCACTGGATGGTATACTGCANGCCCTTCCACATGTTATAGC
ACTCTTCATAGTGCCAACCCATTTTACCACACATTTANGGCTCTTATTCC
CTCGAGCCATATGGACAACAAACATTCATGATTGTATCCATGGCAAGCTA
TGGCCTTGGATGGGCGCTGGCTATCACACTATTCACCACACACATACCGA
CATATTATGGTCATTATACCATATGGATGGACTGGATGCTGGNAACTCTT
TGTGATCCANCTGATGATGACTGGGGAAAGANAAATGATGAACCTTGACC
TA
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