EY665131

Overview
NameEY665131
Unique NameEY665131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10777 contig Csv1_Contig10777:1..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS193_ARATH (40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.672e-68
Identity = 120/142 (84.51%), Postives = 132/142 (92.96%), Query Frame = 3
Query:   87 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 512
            MAT +TVKDVSPHEFVKAY+AHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLR GLGVG+FRRIYGGSKRNGSRPPHFCKSSG +ARHILQQLQ MNI+D++ KGGR+ITSSGQRDLDQVAGRI  A
Sbjct:    1 MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAAA 142          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS191_ARATH (40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.002e-67
Identity = 119/143 (83.22%), Postives = 133/143 (93.01%), Query Frame = 3
Query:   87 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVAP 515
            MAT +TVKDVSPH+FVKAY++HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLR GLGVG+FRRIYGGSKRNGSRPPHFCKSSG IARHILQQL+ MNI++++ KGGRRITSSGQRDLDQVAGRI V P
Sbjct:    1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAVEP 143          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS192_ARATH (40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 7.181e-66
Identity = 117/139 (84.17%), Postives = 131/139 (94.24%), Query Frame = 3
Query:   87 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRI 503
            MAT +TVKDVSPH+FVKAY++HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARKIYLR GLGVG+FRRIYGGSKRNGSRPPHFCKSSG IARHILQQL+ M+I++++ KGGRRITSSGQRDLDQVAGRI
Sbjct:    1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRI 139          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_ORYSJ (40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.310e-64
Identity = 115/140 (82.14%), Postives = 129/140 (92.14%), Query Frame = 3
Query:   90 ATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVV 509
            +TARTVKDV+PHEFVKAYSAHLKRSGKMELP W DIVKTA+FKEL PYDPDWYY RAAS+ARKIYLRQG+GVG F++IYGG +RNGSRPPHFCKSSGAI+R+ILQQLQ M IID++PKGGR ITS G+RDLDQVAGR+ V
Sbjct:    4 STARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQVAGRVDV 143          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_MYAAR (40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.839e-45
Identity = 76/134 (56.72%), Postives = 109/134 (81.34%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRI 503
            +VKDVS HEF +A++A LK+SGKM++P WTD VKT  FKEL+PY+PDWY++RAAS+ R +Y+R   G+GSF +IYGG +R G+ P HFCK++G+I+R +LQ L+ + I++ +P GGRR+TS G+RDLD++A +I
Sbjct:    4 SVKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDLDRIAAQI 137          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_BRABE (40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.104e-41
Identity = 76/137 (55.47%), Postives = 106/137 (77.37%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 512
            TVKDV+  EFVKA++A LK+SGK++LP W D+VKTA  KELAPYDPDW+Y+RAAS AR +Y+R G+GVG+  +IYGG KR G++P  F   S  ++R +LQ L+ + +++ +  GGRR+TS GQRDLD++AG++  A
Sbjct:    6 TVKDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLDRIAGQVATA 142          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_MYXGL (40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 73/136 (53.68%), Postives = 105/136 (77.21%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVV 509
            TVKDV+  EFVKA +A  K+SGK++ P W D VK  + KELAP+D DWYY+R AS+AR +Y+R G+GVG+  +IYGG +RNG+RP H+ + S  +AR +LQ L+ + +++ +P GGRR+TS GQRD+D++AG++VV
Sbjct:    5 TVKDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRDMDRIAGQVVV 140          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_RAT (40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40
Identity = 74/137 (54.01%), Postives = 103/137 (75.18%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 512
            TVKDV+  EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS  +IYGG +RNG RP HF + S ++AR +LQ L+ + +++ +  GGR++T  GQRDLD++AG++  A
Sbjct:    5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAA 141          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_MOUSE (40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40
Identity = 74/137 (54.01%), Postives = 103/137 (75.18%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 512
            TVKDV+  EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS  +IYGG +RNG RP HF + S ++AR +LQ L+ + +++ +  GGR++T  GQRDLD++AG++  A
Sbjct:    5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAA 141          
BLAST of EY665131 vs. ExPASy Swiss-Prot
Match: RS19_PONAB (40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.508e-39
Identity = 73/137 (53.28%), Postives = 102/137 (74.45%), Query Frame = 3
Query:  102 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIDIEPKGGRRITSSGQRDLDQVAGRIVVA 512
            TVKDV+  EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS  +IYGG +RNG  P HF + S ++AR +LQ L+ + +++ +  GGR++T  GQRDLD++AG++  A
Sbjct:    5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAA 141          
The following BLAST results are available for this feature:
BLAST of EY665131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
RS193_ARATH7.672e-6884.5140S ribosomal protein S19-3 OS=Arabidopsis thalian... [more]
RS191_ARATH1.002e-6783.2240S ribosomal protein S19-1 OS=Arabidopsis thalian... [more]
RS192_ARATH7.181e-6684.1740S ribosomal protein S19-2 OS=Arabidopsis thalian... [more]
RS19_ORYSJ2.310e-6482.1440S ribosomal protein S19 OS=Oryza sativa subsp. j... [more]
RS19_MYAAR1.839e-4556.7240S ribosomal protein S19 OS=Mya arenaria GN=RPS19... [more]
RS19_BRABE2.104e-4155.4740S ribosomal protein S19 OS=Branchiostoma belcher... [more]
RS19_MYXGL7.995e-4153.6840S ribosomal protein S19 OS=Myxine glutinosa GN=r... [more]
RS19_RAT3.038e-4054.0140S ribosomal protein S19 OS=Rattus norvegicus GN=... [more]
RS19_MOUSE3.038e-4054.0140S ribosomal protein S19 OS=Mus musculus GN=Rps19... [more]
RS19_PONAB1.508e-3953.2840S ribosomal protein S19 OS=Pongo abelii GN=RPS19... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665131 ID=EY665131; Name=EY665131; organism=Citrus sinensis; type=EST; length=715bp
CCACGCGTCCGGAGAGAGATATAAGCAATTCCACCACCTTCTTGCAAAAG
CGAAGCTTTGAGTCGCTGTCCTGCTCTGTTGTGACCATGGCTACCGCTAG
GACTGTCAAAGATGTGTCTCCTCATGAGTTTGTGAAGGCTTACTCTGCTC
ATCTCAAGCGATCTGGCAAGATGGAACTTCCCCCATGGACTGACATAGTC
AAGACTGCCCAGTTCAAGGAGCTTGCTCCCTATGACCCTGACTGGTACTA
TGTCAGAGCTGCCTCCATGGCAAGGAAAATCTACTTGAGGCAAGGGCTTG
GTGTGGGTTCTTTCAGGAGGATTTATGGTGGAAGTAAGAGGAATGGAAGT
CGTCCACCTCACTTCTGCAAAAGCAGTGGTGCTATTGCTCGCCACATTCT
TCAACAGTTGCAGAACATGAACATTATAGATATTGAGCCCAAGGGTGGAA
GGAGAATTACTTCCAGTGGCCAACGAGACCTTGACCAAGTTGCCGGAAGG
ATTGTCGTTGCTCCTTGAAGCTGCTTGACGGTGATCTTGTTTGATTTGTT
GCAGGTTTTTGTTAGTTGATGGAATGATGTTGCATTCTTAAGTAAGTTTT
GATTCCAAGCATGGACTTTTTATGATGAACCCAACTTCAGTTTTGTTGCT
TTTAGAATGTTGACATTTATCTGTAGTATTCACTATAAATTCCTGTTATC
CAAAAAAAAAAAAAA
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