EY665126

Overview
NameEY665126
Unique NameEY665126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY665126_ssr376 microsatellite EY665126_ssr376:376..400. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.947e-30
Identity = 63/106 (59.43%), Postives = 82/106 (77.36%), Query Frame = 3
Query:   72 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSERTELN 389
            +EV LLG WASPF  RV++AL+ KG+  YEY+EE + NKSP LL LNP++KKVPV +H  K + ES +ILEYIDETW QNP+LP+DPY+R+ ARF+AK  +   +N
Sbjct:    5 EEVKLLGIWASPFSRRVEMALKLKGI-PYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMN 109          
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.947e-30
Identity = 60/99 (60.61%), Postives = 83/99 (83.84%), Query Frame = 3
Query:   72 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKY 368
            ++V LLG   SPFV RV++AL+ KGV +Y+++EE++ NKS  LL+ NPV+KKVPVF+H E+ + ESL+I+EYIDETW+ NP+LP DPYQRA+ARFW+K+
Sbjct:    6 EDVKLLGIVGSPFVCRVQIALKLKGV-EYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKF 103          
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.812e-29
Identity = 66/98 (67.35%), Postives = 76/98 (77.55%), Query Frame = 3
Query:   75 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKY 368
            EV LLGFW SPF  RV+ AL+ KGV  YEYIEED  NKS  LL+ NPVYKKVPV IH  K + ES+IILEYIDET+E   +LP+DPY RA+ARFWAK+
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGV-KYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKF 99          
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.396e-28
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 3
Query:   75 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKY 368
            EV LLGFW SPF  RV+ AL+ KGV  YEYIEED  NKS  LL+ NPV+KKVPV IH  K + ES++ILEYIDET+E   +LP+DPY RA+ARFW+K+
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGV-KYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKF 99          
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.061e-28
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 3
Query:   75 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKY 368
            EV LLGFW SPF  RV+ AL+ KGV  YEYIEED  NKS  LL+ NP++KKVPV IH  K + ES++ILEYIDET+E   +LP+DPY RA+ARFWAK+
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGV-KYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKF 99          
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.015e-27
Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 3
Query:   75 EVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNPLLPRDPYQRAMARFWAKYSE 374
            EV LLG   SPF  RV+ AL+ KGV  YE+IEED+ NKSP LL+ NP++KK+PV IH  K + ES++ILEYIDE +E   +LP+DPY RA+ARFWAKY E
Sbjct:    3 EVKLLGLRYSPFSHRVEWALKIKGV-KYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVE 101          
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.964e-26
Identity = 54/105 (51.43%), Postives = 78/105 (74.29%), Query Frame = 3
Query:   66 MAKEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETW-EQNPLLPRDPYQRAMARFWAKYSER 377
            M+ EV LL  WAS +  R ++AL +KGV  YEY EE++ N+SP LL++NP++KK+PV IH  K + ES II++YIDE W +++PL+P DPY+R+ ARFW  Y ++
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGV-RYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDK 104          
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.444e-25
Identity = 56/104 (53.85%), Postives = 75/104 (72.12%), Query Frame = 3
Query:   69 AKEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETW-EQNPLLPRDPYQRAMARFWAKYSER 377
            +  V LL FW S F  R+++AL  KG+  YE  EE++ +KSP LLE+NPV+KK+P+ IH  K + ESL ILEYIDE W ++ PLLP DPY+R+ ARFWA Y ++
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGI-KYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDK 105          
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.202e-25
Identity = 55/104 (52.88%), Postives = 74/104 (71.15%), Query Frame = 3
Query:   72 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQNP--LLPRDPYQRAMARFWAKYSER 377
            +EV LL FW S F  R+++AL +K +  YEY EED+ NKSP LL++NP++KK+PV IH  K + ES+I +EYI+E W+     LLP DPY RA ARFWA Y ++
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEI-KYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDK 106          
BLAST of EY665126 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.362e-25
Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 3
Query:   72 KEVTLLGFWASPFVFRVKVALQQKGVVDYEYIEEDIFNKSPRLLELNPVYKKVPVFIHGEKVVNESLIILEYIDETWEQN--PLLPRDPYQRAMARFWAKYSER 377
            +EV LL FW S F  R+++AL +K +  YEY +ED+ NKSP LL++NP++KK+PV IH  K + ES+I +EYI+E W+     LLP DPY RA ARFWA Y ++
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEI-KYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDK 106          
The following BLAST results are available for this feature:
BLAST of EY665126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
GSTXA_ARATH1.947e-3059.43Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX6_SOYBN1.947e-3060.61Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX2_TOBAC2.812e-2967.35Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC1.396e-2864.29Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC4.061e-2864.29Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU2.015e-2761.00Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX3_SOYBN4.964e-2651.43Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC1.444e-2553.85Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX4_TOBAC4.202e-2552.88Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC9.362e-2551.92Probable glutathione S-transferase parC OS=Nicotia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-C12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665126 ID=EY665126; Name=EY665126; organism=Citrus sinensis; type=EST; length=586bp
CCACAAAAAATAAATCATCTCATCACAAAGCATTACAGAGATCAATTAAC
TATCAGCGAAATAATATGGCCAAAGAAGTGACGCTTTTGGGGTTTTGGGC
AAGTCCATTTGTGTTCAGGGTAAAAGTCGCTCTGCAGCAGAAGGGTGTTG
TTGATTATGAATACATTGAAGAAGACATCTTTAACAAGAGCCCCAGGCTC
TTGGAACTGAACCCAGTTTATAAGAAGGTTCCTGTGTTCATCCATGGCGA
GAAAGTGGTCAATGAATCGTTGATTATTCTTGAGTACATCGATGAGACAT
GGGAGCAAAATCCTTTGTTGCCTCGAGACCCTTACCAAAGAGCCATGGCT
CGTTTCTGGGCTAAATATTCAGAAAGAACTGAACTGAACTGAACTGAACT
TCACTATCTATATACTAGAAAATCTTGCAGAGAGGCTTATAAATCAGCAA
ATTTGAGCTTGATCTCTTCGATTTTTGCTCCATTATGTTATGGTATCAAT
GGTTTCATATTTTCCNNNNNANAAANNNNNNNNNNNAAANANANAAAAAA
AAAAAAANAAAAAAAAAAAAAAAAAAAAAAANNNNA
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