EY665099

Overview
NameEY665099
Unique NameEY665099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8668 contig Csv1_Contig8668:38..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GRS14_ARATH (Monothiol glutaredoxin-S14, chloroplastic OS=Arabidopsis thaliana GN=GRXS14 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.341e-50
Identity = 105/172 (61.05%), Postives = 124/172 (72.09%), Query Frame = 1
Query:   61 TPRAFTCKSVSVGKVASFPPPLVNFASPSS---YSPRSLTGVTNNLRLLGVKSNKATTFRCLASALTPELKSTLDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEKALCT 567
            TP   T  +V    V + P  +     P+S        L+   +NL+L      K T FRC ASALTP+LK TL+K+V   KVVLFMKGT+DFP CGFS+TVVQILK+LN PFE VNILENEMLRQGLKEYS+WPTFPQLYI GEFFGGCDIT+EA+K GELQE +EKA+C+
Sbjct:    8 TPTLITSVAVVSSSVTNKPHSIRFSLKPTSALVVHNHQLSFYGSNLKL------KPTKFRCSASALTPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKEYSNWPTFPQLYIGGEFFGGCDITLEAFKTGELQEEVEKAMCS 173          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GRXS7_ORYSJ (Monothiol glutaredoxin-S7, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXS7 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.255e-48
Identity = 94/126 (74.60%), Postives = 110/126 (87.30%), Query Frame = 1
Query:  196 LGVKSNKATTFRCLASA----LTPELKSTLDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEKAL 561
            L V S +A + RCLA+A    L PE+++TLDKVV  +KVVLFMKGTKDFPQCGFSHTVVQIL+SL+ PFET+++L NE LRQGLKEYSSWPTFPQLYI+GEFFGGCDITV+AYK+GELQE LEKA+
Sbjct:   41 LSVGSARARSTRCLAAAGGGGLAPEMRATLDKVVGSHKVVLFMKGTKDFPQCGFSHTVVQILRSLDVPFETLDVLANEALRQGLKEYSSWPTFPQLYIDGEFFGGCDITVDAYKSGELQETLEKAM 166          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: YC64L_SYNY3 (Uncharacterized monothiol glutaredoxin ycf64-like OS=Synechocystis sp. (strain PCC 6803) GN=slr1846 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.141e-33
Identity = 64/107 (59.81%), Postives = 85/107 (79.44%), Query Frame = 1
Query:  247 LTPELKSTLDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEKALCT 567
            + PE K+ +D++VT NKV++FMKGTK  PQCGFS+ VVQIL  L  PFET+++L +  +RQG+KEYS+WPT PQ+Y+ GEF GG DI +E Y+NGELQE+LE AL +
Sbjct:    1 MNPETKARIDQLVTANKVMVFMKGTKLMPQCGFSNNVVQILNMLGIPFETLDVLADAEIRQGIKEYSNWPTIPQVYVNGEFVGGSDIMIELYQNGELQEMLEVALAS 107          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: YCF64_PORPU (Uncharacterized monothiol glutaredoxin ycf64 OS=Porphyra purpurea GN=ycf64 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.917e-27
Identity = 55/102 (53.92%), Postives = 74/102 (72.55%), Query Frame = 1
Query:  256 ELKSTLDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEKAL 561
            E K  +++++  NK+VLFMKG+K  P CGFS+T +QIL +LN  + T +ILENE +RQ +KE+SSWPT PQLYI  EF GG DI +E ++ GELQ  +E  L
Sbjct:    4 ETKKVIEQILDNNKIVLFMKGSKLMPMCGFSNTAIQILNTLNTDYFTYDILENENIRQAIKEHSSWPTIPQLYINREFVGGADIMLELFEQGELQAQVETLL 105          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: YCF64_PORYE (Uncharacterized monothiol glutaredoxin ycf64 OS=Porphyra yezoensis GN=ycf64 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.303e-26
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 1
Query:  256 ELKSTLDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEKALCT 567
            E K  +D+++  +K+VLFMKG K  P CGFS+T  QIL +LN  + T +ILE+E +R+ +KEYSSWPT PQLYI  EF GG DI +E ++ GELQ  +E  L T
Sbjct:    4 ETKKRIDQLLNDHKIVLFMKGNKTMPMCGFSNTATQILNTLNIKYFTYDILEDENIRKAIKEYSSWPTIPQLYINREFIGGADIMLELFETGELQAQVEALLAT 107          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GLRX2_RICTY (Probable monothiol glutaredoxin-2 OS=Rickettsia typhi GN=grxC2 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.702e-26
Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 1
Query:  271 LDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLE 552
            +   +  NKVVLFMKGTK+ P CGFS TVV IL  L   F  +N+L +  LR+ LK++S WPTFPQLYI GE  GGCDI  E Y+NGEL+++L+
Sbjct:   10 IQNAIKKNKVVLFMKGTKEMPACGFSGTVVAILNKLGVEFSDINVLFDTSLREDLKKFSDWPTFPQLYINGELVGGCDIVKELYQNGELEKMLK 103          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GLRX2_RICPR (Probable monothiol glutaredoxin-2 OS=Rickettsia prowazekii GN=grxC2 PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25
Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 1
Query:  271 LDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLE 552
            +   +  NKVVLFMKGTK+ P CGFS TVV IL  L   F  +N+L +  LR+ LK++S WPTFPQLYI G   GGCDI  E Y+NGEL+++L+
Sbjct:   10 IQNAIKKNKVVLFMKGTKEMPACGFSGTVVAILNKLGVEFSDINVLFDTALREDLKKFSDWPTFPQLYINGVLVGGCDIAKELYQNGELEKMLK 103          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GLRX2_RICFE (Probable monothiol glutaredoxin-2 OS=Rickettsia felis GN=grxC2 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.816e-24
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 1
Query:  271 LDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLE 552
            ++  +  NKVVLFMKGTK+   CGFS  VV IL  L   F  +N+  N   R+ LK++S WPTFPQLYI+GE  GGCDI  E Y NGEL+++L+
Sbjct:   10 IENEIKNNKVVLFMKGTKEATMCGFSAKVVAILNKLGVEFRDINVFVNPEFREDLKKFSDWPTFPQLYIKGELVGGCDIATELYNNGELEKMLK 103          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GRS16_ARATH (Monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana GN=GRXS16 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.803e-24
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 1
Query:  247 LTPELKSTLDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEM---LRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELL 549
            LT  L+  +D++V  +KVV F+KG++  PQCGFS  VV IL+S    +ETV++L++E    LR+ LK YS+WPTFPQ++++GE  GGCDI    Y+NGEL  +L
Sbjct:  189 LTVPLEELIDRLVKESKVVAFIKGSRSAPQCGFSQRVVGILESQGVDYETVDVLDDEYNHGLRETLKNYSNWPTFPQIFVKGELVGGCDILTSMYENGELANIL 292          
BLAST of EY665099 vs. ExPASy Swiss-Prot
Match: GLRX2_RICCN (Probable monothiol glutaredoxin-2 OS=Rickettsia conorii GN=grxC2 PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.803e-24
Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 1
Query:  271 LDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLE 552
            ++  +  NKVVLFMKG K  P CGFS TVV IL  L   F  +N+L +  LR+ LK++S WPTFPQLYI GE  GGCDI  E Y++GEL+++L+
Sbjct:   10 IENEIKNNKVVLFMKGIKKSPACGFSGTVVAILNKLGVEFRDINVLFDAELREDLKKFSDWPTFPQLYINGELVGGCDIARELYQSGELEKMLK 103          
The following BLAST results are available for this feature:
BLAST of EY665099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
GRS14_ARATH1.341e-5061.05Monothiol glutaredoxin-S14, chloroplastic OS=Arabi... [more]
GRXS7_ORYSJ1.255e-4874.60Monothiol glutaredoxin-S7, chloroplastic OS=Oryza ... [more]
YC64L_SYNY31.141e-3359.81Uncharacterized monothiol glutaredoxin ycf64-like ... [more]
YCF64_PORPU7.917e-2753.92Uncharacterized monothiol glutaredoxin ycf64 OS=Po... [more]
YCF64_PORYE2.303e-2652.88Uncharacterized monothiol glutaredoxin ycf64 OS=Po... [more]
GLRX2_RICTY6.702e-2656.38Probable monothiol glutaredoxin-2 OS=Rickettsia ty... [more]
GLRX2_RICPR4.344e-2555.32Probable monothiol glutaredoxin-2 OS=Rickettsia pr... [more]
GLRX2_RICFE2.816e-2453.19Probable monothiol glutaredoxin-2 OS=Rickettsia fe... [more]
GRS16_ARATH4.803e-2450.00Monothiol glutaredoxin-S16, chloroplastic OS=Arabi... [more]
GLRX2_RICCN4.803e-2454.26Probable monothiol glutaredoxin-2 OS=Rickettsia co... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-074-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665099 ID=EY665099; Name=EY665099; organism=Citrus sinensis; type=EST; length=678bp
CCACGCGTCCGGCTCGTAGTTGGGGCTGTTATGGCTCTTCTTCATTCGTC
GATGACTGCAACGCCACGCGCCTTCACCTGTAAATCAGTATCGGTGGGCA
AAGTTGCATCCTTTCCACCTCCGCTTGTGAATTTCGCATCTCCGTCATCT
TACTCTCCGCGCTCCTTGACCGGCGTCACAAATAATCTCCGCCTGTTGGG
GGTTAAGTCTAACAAAGCCACGACCTTTCGCTGCTTGGCTTCTGCTTTGA
CACCTGAGCTCAAGTCAACATTGGATAAAGTTGTTACAGGAAACAAAGTG
GTTCTGTTTATGAAGGGCACGAAGGATTTCCCACAATGCGGATTCTCACA
CACTGTGGTGCAGATATTGAAGTCCTTGAATGCACCATTTGAAACGGTAA
ACATTCTAGAAAATGAAATGTTACGACAAGGGTTGAAGGAGTATTCTAGT
TGGCCAACCTTTCCTCAACTTTACATTGAAGGAGAGTTTTTTGGTGGCTG
TGACATCACAGTTGAGGCCTATAAGAATGGGGAATTGCAAGAACTATTGG
AGAAGGCACTGTGCACCTGAGACTCTTTTAGTTGGAAGAGGGCTATTATA
CTTGTGTACTTGCTTAGTGGTGATTAGAAAAAATCAACTGTTGTTTCTTG
CTTGGTTCTGATTAAAAAAAAAAAAAAA
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