EY665089

Overview
NameEY665089
Unique NameEY665089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665089 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.163e-28
Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 2 
Query:  113 MLGVFSSAIVSPPEELVA--AGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQNESPLRQRLFAVKDEIFCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVA 553
            ML VF  +I  PP EL    AG +    KT    + + F      +    + +   +A++H NE+PL+ R   V D++FC+F GALDN   LR+ YGL++ A E ++++EAYK LRDRAPYPP+ V+  L G FAFI++D   STLF+A
Sbjct:    1 MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREE-IAESFKTWKQDSTFYHLFNGNFMAFSHGNENPLQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFLA 148
The following BLAST results are available for this feature:
BLAST of EY665089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TSJT1_TOBAC6.163e-2842.95Stem-specific protein TSJT1 OS=Nicotiana tabacum G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-H06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665089 ID=EY665089; Name=EY665089; organism=Citrus sinensis; type=EST; length=854bp
CTTTGAACTTTCCAGTTAAAGCCAAAGGTTCCGAACGGATCAAAGTTTTC
TTGTAGGAGAGAGAAATTTCTAGGGCGAGAAAGCGAGAGAAAAGGAAATT
TGGTAGCTTAAAATGTTGGGAGTGTTCAGCAGCGCGATCGTTTCACCTCC
AGAGGAGCTGGTGGCGGCCGGAAGCCGGACTCCGTCGCCGAAGACCACAT
CGACGGCACTGGTCGACCGTTTCCTCCAGACCAACTCGTCTGCTGTGTCC
GTACAGGTCGGGGACAACGTCACCCTCGCGTACACTCATCAGAACGAGTC
TCCTTTACGGCAAAGATTATTTGCTGTGAAAGATGAGATCTTTTGCTTGT
TTGAGGGAGCACTTGATAACTTGGGAAGCCTGAGGCAGCAATATGGACTA
GCTAAGTCGGCAAATGAAGTGATCTTGGTGATTGAGGCATACAAGGCTCT
GCGTGATCGGGCCCCTTACCCACCGAACCATGTCGTTGGCCACCTTAGTG
GGTACTTTGCCTTCATTGTCTACGACAAGTCCACCTCCACCTTGTTTGTG
GCTTCTGTAGGTTTATTTAATTTCTTACCTACCAAAAAACCTATGTGAAG
CTTATCGCTTTGGTTGGTTTTGGATAGCAACTTTTTAATAATGTTAACAA
CTGTGGCAGGACCAATTTGGTAAGGTTCCTCTTTATTGGGGAATCACTGC
TGATGGACATGTTGCCTTTGCTGATGATGCTGACTTGCTCAAAGGTGCTT
GCGGGCAGTCACTTGCTTCTTTCCTCANGGNTGTTCTTCTCACAGCAGTT
GGGAGACTGANATGCTTTGAGATCCAAGAACAGATCACTGCGTTCCTGCT
NGCG
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