EY665070

Overview
NameEY665070
Unique NameEY665070
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10679 contig Csv1_Contig10679:38..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.615e-77
Identity = 140/176 (79.55%), Postives = 160/176 (90.91%), Query Frame = 1
Query:  103 VPAAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSALTG 630
            +PA  A DSTFVE+WKK+ PN++PPKTPS YM PRP TP+SIPSKLTVNFVLPY+SEL+ KEVDMVI+PA+TGQMGVLPGHV TIAELKPGV+SVH+GND  KYFVS GFAFIHANS ADIIAVEAVP+D+ID +LVQKGLAEF QKL++A+TD+ KAEAQIGVDVHSALN+ALTG
Sbjct:   25 LPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRPATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGVDVHSALNAALTG 200          
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.615e-77
Identity = 138/170 (81.18%), Postives = 158/170 (92.94%), Query Frame = 1
Query:  121 VDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSALTG 630
            +DSTFVE+WKKV PNM+PP+TPS +M PRP TP+SIP+KLTVNFVLPY SEL+ KEVDMVI+PASTGQMGVLPGHVPTIAELKPG++SVH+G D KKYF+SSGFAF+HANSVADIIAVEAVP+D IDPS VQKGLAEF QKL+SATTDL KAEAQIGV+VHSA+N+AL+G
Sbjct:   34 LDSTFVEAWKKVAPNMDPPQTPSAFMKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQIGVEVHSAINAALSG 203          
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.563e-70
Identity = 128/174 (73.56%), Postives = 153/174 (87.93%), Query Frame = 1
Query:  109 AAPAVDSTFVESWKKVNPNMEPPKTPSVYMTPRPQTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSALTG 630
            A PA +S+FVE+W+KV+PN++PPKTP  ++  RP  P++IP+KLTVNFVLPY+S+L+AKEVD VI+PA+TG+MGVLPGHV TIAELKPGVL+V +G DT KYFVSSGF FIHANSVADIIAVEAVP++Q+D  LVQKGL EF QKL+SATTDL K EAQIG+DV SALNSALTG
Sbjct:   24 ATPATNSSFVEAWRKVSPNIDPPKTPLEFLKTRPPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDLEKREAQIGIDVDSALNSALTG 197          
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_KLULA (ATP synthase subunit delta, mitochondrial OS=Kluyveromyces lactis GN=ATP16 PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.815e-20
Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 1
Query:  238 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624
            L + F LP+ +  S   V  V +PA +GQ+G+L  HVPT+ +L PGV+ V +G+ +KK+FVS GFA +  +S   I +VEA P++   P  V+  LAE  + +SSA  ++  AEA I ++V  AL +AL
Sbjct:   31 LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEGSSSKKFFVSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAEAQKNVSSA-DEVAAAEAAIQLEVLEALQAAL 158          
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_AGABI (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.370e-20
Identity = 50/133 (37.59%), Postives = 81/133 (60.90%), Query Frame = 1
Query:  226 IPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624
            I  KL ++  LP+ +  S+++V  V +PA +G MG+L  HVP+I  L+PGV+ V + + ++K+FVS GFA +H N+   I  VEA P++      ++  L E N+  + + ++  K EAQI  +V+ AL  AL
Sbjct:   28 ISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKMEAQIEAEVYEALQHAL 160          
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.280e-20
Identity = 49/126 (38.89%), Postives = 77/126 (61.11%), Query Frame = 1
Query:  238 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSV-HDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSAL 612
            LT + + P+ +    K+  +V +P + G  GV   HVP IAELKPGV+ + H+  D +K+F+S GFAF++ ++   I  +EAVPIDQ+D   V+ GLA + Q  + A  +  KA A IG++ +  +
Sbjct:   37 LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEENAKAVALIGLETYQQM 162          
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_ASHGO (ATP synthase subunit delta, mitochondrial OS=Ashbya gossypii GN=ATP16 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.536e-19
Identity = 53/129 (41.09%), Postives = 77/129 (59.69%), Query Frame = 1
Query:  238 LTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624
            L +NF LP+ +  +   V  V +P  TGQ+G+L  HVP + +L PGV+ V +G+++KK+FVS GFA +  +S   I +VEA P+D      V+  LAE  QK + A      AEA I ++V  AL +AL
Sbjct:   30 LKLNFALPHETLFAGTAVKQVNLPVKTGQIGILANHVPIVEQLVPGVVEVLEGSESKKFFVSGGFATVQPDSTLSITSVEAFPLDSFSAENVRALLAE-AQKNAGAADSRVAAEASIQIEVLEALQAAL 157          
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_YEAST (ATP synthase subunit delta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP16 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.699e-18
Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  232 SKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVHDGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624
            S L + F LP+ +  S  EV  V +PA +G++GVL  HVPT+ +L PGV+ V +G+++KK+F+S GFA +  +S   + A+EA P++      ++  LAE  + +SS+      AEA I V+V   L S L
Sbjct:   30 SGLKLQFALPHETLYSGSEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEAFPLESFSQENIKNLLAEAKKNVSSSDA-REAAEAAIQVEVLENLQSVL 159          
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_BOVIN (ATP synthase subunit delta, mitochondrial OS=Bos taurus GN=ATP5D PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.101e-17
Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 1
Query:  211 QTPTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624
            Q P + P +++  F  P     ++  V  V VP  TG  G+L  HVPT+  L+PG++ VH +   T KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +L  A  +  +AE QI ++ + AL  AL
Sbjct:   29 QAPAAGPGQMSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRIEANEALVKAL 167          
BLAST of EY665070 vs. ExPASy Swiss-Prot
Match: ATPD_MOUSE (ATP synthase subunit delta, mitochondrial OS=Mus musculus GN=Atp5d PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  217 PTSIPSKLTVNFVLPYASELSAKEVDMVIVPASTGQMGVLPGHVPTIAELKPGVLSVH-DGNDTKKYFVSSGFAFIHANSVADIIAVEAVPIDQIDPSLVQKGLAEFNQKLSSATTDLXKAEAQIGVDVHSALNSAL 624
            P + P +++  F  P      +  V  V VP  TG  G+L  HVPT+  L+PG++ VH +   T KYFVSSG   ++A+S   ++A EAV +D +D    +  L +   +LS A  +  +AE QI ++ + AL  AL
Sbjct:   31 PAAGPGQMSFTFASPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEALVKAL 167          
The following BLAST results are available for this feature:
BLAST of EY665070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
ATP4_IPOBA1.615e-7779.55ATP synthase subunit delta', mitochondrial OS=Ipom... [more]
ATP4_ARATH1.615e-7781.18ATP synthase subunit delta', mitochondrial OS=Arab... [more]
ATP4_PEA5.563e-7073.56ATP synthase subunit delta', mitochondrial OS=Pisu... [more]
ATPD_KLULA1.815e-2041.86ATP synthase subunit delta, mitochondrial OS=Kluyv... [more]
ATPD_AGABI2.370e-2037.59ATP synthase subunit delta, mitochondrial OS=Agari... [more]
ATPD_DICDI5.280e-2038.89ATP synthase subunit delta, mitochondrial OS=Dicty... [more]
ATPD_ASHGO1.536e-1941.09ATP synthase subunit delta, mitochondrial OS=Ashby... [more]
ATPD_YEAST1.699e-1838.93ATP synthase subunit delta, mitochondrial OS=Sacch... [more]
ATPD_BOVIN1.101e-1735.25ATP synthase subunit delta, mitochondrial OS=Bos t... [more]
ATPD_MOUSE1.878e-1735.77ATP synthase subunit delta, mitochondrial OS=Mus m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665070 ID=EY665070; Name=EY665070; organism=Citrus sinensis; type=EST; length=774bp
CTCCCAAAGCTAATCAACGCTCTCGCCGAAATGTTCCGGCAAGCTTCACG
CCTCTTGGCCCGAGCCAGCGCGGTGACAAGGTCTCGCGCCTTCTCATCGC
AGGTCCCAGCCGCGCCCGCCGTTGATTCGACTTTCGTTGAGTCATGGAAG
AAAGTGAATCCAAACATGGAGCCGCCAAAGACTCCATCGGTTTACATGAC
CCCTCGCCCACAAACCCCCACTTCAATCCCCTCCAAGCTCACCGTCAACT
TCGTCCTTCCCTACGCCTCTGAGCTCTCCGCTAAGGAGGTCGATATGGTT
ATAGTTCCAGCATCAACTGGGCAAATGGGTGTTCTGCCTGGACATGTACC
TACAATTGCAGAACTAAAGCCTGGAGTCTTATCGGTTCATGATGGGAATG
ATACCAAGAAATACTTTGTTAGCAGTGGGTTTGCATTTATCCATGCAAAC
TCTGTTGCTGACATAATTGCTGTTGAGGCTGTGCCAATCGACCAAATTGA
CCCCAGCTTGGTCCAGAAGGGCCTTGCAGAGTTCAACCAGAAGCTCAGTT
CAGCTACAACTGACCTGNAGAAAGCTGAAGCTCAGATAGGTGTTGATGTT
CACAGTGCACTCAACTCTGCTCTCACAGGCTAATTTTCTCCTACCTNCAA
ATTTTTCTCATTTTGCTTCCTATTTTTGAGTTTCATTGTGGTTTTCCATC
CTNCATGTAATCAGCAAGTCACTAAGATTTGTCAAACATAATTTTACTGG
TTTTCTCAGAGGCTTAAAATAATT
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