EY665059

Overview
NameEY665059
Unique NameEY665059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7601 contig Csv1_Contig7601:547..1428. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 2.277e-73
Identity = 124/176 (70.45%), Postives = 141/176 (80.11%), Query Frame = -3
Query:  352 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLA 870
            GNR+GQ Y+ +       +  R +   LWFDP+ DYH YTILW+H HIVFYVDDVPIR YKN+      +P +QPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EARRYRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct:  117 GNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292          
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 1.382e-70
Identity = 119/178 (66.85%), Postives = 141/178 (79.21%), Query Frame = -3
Query:  346 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI 870
            GNR+GQ YT +       +  R +   LWFDP+ D+H Y I WNH  IVFYVD+VPIRVYKN+   + P+P  QPMGVYSTLWEADDWATRGG+EKI+WS+APFYAYY+DFDIEGCPVPGPA+C +N  NWWE + Y  L+ +EAR YRWVR+NHM+YDYCTDKSR+PVPPPEC AGI
Sbjct:  116 GNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPECSAGI 293          
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.293e-49
Identity = 92/175 (52.57%), Postives = 115/175 (65.71%), Query Frame = -3
Query:  358 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 870
            GNRTGQ Y  +          R +   LWFDP+ DYH Y++LWN + IVF+VDDVPIRV+KNS      FP NQPM +YS+LW ADDWATRGGLEK +W KAPF A YR F ++GC     A  C +    WW+   +Q L A + +R +WVR  + IY+YCTD+ R+PVPPPEC
Sbjct:  113 GNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287          
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.312e-48
Identity = 90/177 (50.85%), Postives = 114/177 (64.41%), Query Frame = -3
Query:  358 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 870
            GNRTGQ Y  +       +  R +   LWFDP   YH Y++LWN + IV +VDDVPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK +W+ APF A Y  F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + +Y+YCTDK+RYPVPPPEC
Sbjct:  114 GNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290          
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.661e-47
Identity = 90/177 (50.85%), Postives = 110/177 (62.15%), Query Frame = -3
Query:  358 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 870
            GNRTGQ Y  +       +  R +   LWFDP   YH Y++LWN   IV +VDDVPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK DWS APF A Y  F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + IY+YCTD+ RYP  PPEC
Sbjct:  113 GNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.048e-46
Identity = 89/175 (50.86%), Postives = 108/175 (61.71%), Query Frame = -3
Query:  358 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 870
            GNRTGQ Y  +       +  R +   LWFDP  DYH Y++LWN + I F+VDD PIRV+KNS      +P +QPM +YS+LW ADDWATRGG EK DWSKAPF A YR F ++GC     A  CA+    WW+   +Q L A + RR  WVR  H IY+YCTD  RY    PEC
Sbjct:  113 GNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287          
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.048e-46
Identity = 91/176 (51.70%), Postives = 114/176 (64.77%), Query Frame = -3
Query:  358 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYP-VPPPEC 870
            GNRTGQ Y  +       +  R +   LWFDP  +YH Y+ILWN + IVF+VD+VPIRV+KNS      FP +QPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A + RR RWVR  + IY+YCTD  RYP + PPEC
Sbjct:  114 GNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPEC 289          
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.018e-46
Identity = 87/175 (49.71%), Postives = 112/175 (64.00%), Query Frame = -3
Query:  358 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 870
            GNRTGQ Y  +       +  R +   LWFDP   YH Y++LWN + IVF VD++PIRV+KN       FP NQPM VY++LW ADDWATRGGLEK DWSKAPF A Y+ F ++GC     +  CA+    WW+   ++ L + + RR +WVR    IY+YCTD++RYP  PPEC
Sbjct:  113 GNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPEC 287          
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.178e-45
Identity = 88/175 (50.29%), Postives = 110/175 (62.86%), Query Frame = -3
Query:  358 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 870
            GNRTGQ Y  +       +  R +   LWFDP   YH Y++LWN + IVFYVDD PIRV+KNS      FP NQPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A + ++  WVR  + IY+YCTD+ RY   PPEC
Sbjct:  112 GNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286          
BLAST of EY665059 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.624e-45
Identity = 87/175 (49.71%), Postives = 115/175 (65.71%), Query Frame = -3
Query:  358 GNRTGQLYTSRPISMQMXRR*RPES-ELWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 870
            GNRTGQ    +       +  R +   LWFDP+  YH Y++LWN + IVF+VD++PIRV+KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A YR F I+GC     A  CA+    WW+ N ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:  115 GNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 289          
The following BLAST results are available for this feature:
BLAST of EY665059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH6_ARATH2.277e-7370.45Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH1.382e-7066.85Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH2.293e-4952.57Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC3.312e-4850.85Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC3.661e-4750.85Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT4.048e-4650.86Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN4.048e-4651.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN9.018e-4649.71Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.178e-4550.29Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_BRAOB2.624e-4549.71Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665059 ID=EY665059; Name=EY665059; organism=Citrus sinensis; type=EST; length=881bp
GCCGGNATTAACACCTCGACCCACGCGTCCGCTAGNACTCGAGCGGCGGC
CCTTTTTTAAATTCTTTTTATGAAGAAGCTTTTATTGGCACAGAATACTG
TGCATCAAATTCAGACTTATATATGGTACAAGCAGAGCAGAAAACCCACA
TATTTCCCACTCCCATAATTACATTTAAATGCACACAATGTTTTGTTTCC
CTCCCGCCCCTCCCTTGATATGCGTATAAGTCTTTTCACACGAATAGGGA
ATAATACAAAGGACGTGTACGTGAAGTAATATACATGATATGATACGGAT
ATGGAGTACCGTCCAACTGCTTAATTAATTGGCGGGTTGAATTTATATGC
CGGCAAGGCATTCCGGTGGGGGTACTGGGTATCTTGATTTATCAGTGCAA
TAATCATAGATCATGTGGTTGAGACGAACCCATCTGTATCTTCTTGCTTC
CATGGCGGTGAGGGCTTGATAATTATTTGCCTCCCACCAGTTACCTGGGT
TCGAGGCACAGTTTGCTGGTCCAGGAACTGGGCAGCCCTCAATATCAAAG
TCTCTGTAATAAGCATAAAAAGGAGCTTTGCTCCAATCTATTTTCTCTAG
ACCACCTCTTGTTGCCCAGTCATCTGCTTCCCACAGCGTTGAATACACCC
CCATGGGTTGGTTCATTGGAAATGGAGCCCTTCCACTGTTTTTGTAAACC
CTGATGGGCACATCATCCACATAGAAGACAATATGGTGATGGTTCCAGAG
AATAGTGTAAAGGTGATAATCTGCAGCAGGGTCAAACCAGAGTTCACTCT
CTGGTCTCTATCGCCTTTNCATTTGCATAGATATTGGTCTGGACGTGTAA
AGCTGACCCGTTCGGTTCCCAGGAACTCAAA
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