EY665055

Overview
NameEY665055
Unique NameEY665055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 7.832e-91
Identity = 141/195 (72.31%), Postives = 169/195 (86.67%), Query Frame = 2
Query:    2 ASLSHLTFVIGQILQNSWLAANVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXFFCK 586
            ASL+ +TF +GQILQNSW+AANV+NP VSTL+LI+VYLLIG  S L LM RS+  V++ ++SS SLFSQLLNSLFRAPMSFYDSTPLGR+LSRVSSDLSIVDLDVPF LIF V ++ N   +LGVLA+VTWQVLFVS+P+++LA RLQ+YYF TAKELMR+NGTT+S VANHLAES+AGA+TI AF+ E+ FF K
Sbjct:  832 ASLAQVTFAVGQILQNSWMAANVDNPQVSTLKLILVYLLIGLCSVLCLMVRSVCVVIMCMKSSASLFSQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGLIFVVASSVNTGCSLGVLAIVTWQVLFVSVPMVYLAFRLQKYYFQTAKELMRINGTTRSYVANHLAESVAGAITIRAFDEEERFFKK 1026          

HSP 2 Score: 48.521 bits (114), Expect = 7.832e-91
Identity = 36/91 (39.56%), Postives = 45/91 (49.45%), Query Frame = 1
Query:  655 IQRPRTLSATXYILAAFCMVLLXXXTFTPXXIXMALSYGLR*TVPSMSIQNSVLXQLY--------HSVKDFTILHVPVKP*VVETTAPPL 903
            IQR  T+SA      AFCM+LL   TF+   I MALSYGL     +M +  SV  Q Y          +  +T L  P  P V+E T PP+
Sbjct: 1049 IQRLETVSAIVLASTAFCMILLPTGTFSSGFIGMALSYGLS---LNMGLVYSVQNQCYLANWIISVERLNQYTHL-TPEAPEVIEETRPPV 1135          

HSP 3 Score: 46.595 bits (109), Expect = 7.832e-91
Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = 3
Query:  576 FFAKNLDLIDTNASPFFQTFAANEW 650
            FF K+L LIDTNASPFF +FAANEW
Sbjct: 1023 FFKKSLTLIDTNASPFFHSFAANEW 1047          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 9.055e-40
Identity = 78/191 (40.84%), Postives = 124/191 (64.92%), Query Frame = 2
Query:    8 LSHLTFVIGQILQNSWLAANVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXFF 580
            L  + FV+ Q     WLA  +  P ++   LI VY +I  +S  F+ +R++++  LG+++SK+ FS   N++F+APM F+DSTP+GR+L+R SSDL+++D DVPF+ IF V       + L ++  VTWQV+ +++  +     +Q YY A+A+EL+R+NGTTK+ V N+ AE+  G +TI AF   + FF
Sbjct:  736 LGQVGFVVFQAASTYWLAFAIGIPKITNTMLIGVYSIISTLSAGFVYARAITTAHLGLKASKAFFSGFTNAVFKAPMLFFDSTPVGRILTRASSDLNVLDYDVPFAFIFVVAPAVELTAALLIMTYVTWQVIIIALLALAATKVVQDYYLASARELIRINGTTKAPVMNYAAETSLGVVTIRAFGTAERFF 926          

HSP 2 Score: 26.5646 bits (57), Expect = 9.055e-40
Identity = 12/25 (48.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  576 FFAKNLDLIDTNASPFFQTFAANEW 650
            FF   L+L+D +A  FF + AA EW
Sbjct:  925 FFKNYLNLVDADAVLFFLSNAAMEW 949          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 7.705e-32
Identity = 81/217 (37.33%), Postives = 118/217 (54.38%), Query Frame = 2
Query:    8 LSHLTFVIGQILQNSWLA-----ANVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXFFCKEP*PH*YQCQSFL-PNFCS 640
            L+   F   QI  N W+A        +   V    L++VY  + F S++F+  R+      G+ +++ LF  +L S+FRAPMSF+DSTP GR+L+RVS D S+VDLD+PF L      T      + V+  VTWQV  + +PV      +Q+YY A+++EL+R+    KS + +   ESIAGA TI  F  E  F  +    + Y    F+ P FCS
Sbjct:  954 LAQAAFQFLQIASNWWMAWANPQTEGDESKVDPTLLLIVYTALAFGSSVFIFVRAALVATFGLAAAQKLFLNMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLCGIVAVMTNVTWQVFLLVVPVAVACFWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGAATIRGFGQEKRFIKR----NLYLLDCFVRPFFCS 1166          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB3C_ARATH (ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.522e-30
Identity = 74/196 (37.76%), Postives = 115/196 (58.67%), Query Frame = 2
Query:    8 LSHLTFVIGQILQNSWLA------ANVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            L  + F + QI  N W+A       +V+ P V    L++VY+ + F S+L ++ R+   V  G +++  LF ++ + +FR+PMSF+DSTP GR++SR S+D S VDL++P+               +GV++ V+W V  V IPV+  +I  QRYY A A+EL RL G  K+ +  H +E+I+GA TI +F  E  F
Sbjct:  955 LGQVLFQLLQIGSNYWMAWATPVSEDVQAP-VKLSTLMIVYVALAFGSSLCILLRATLLVTAGYKTATELFHKMHHCIFRSPMSFFDSTPSGRIMSRASTDQSAVDLELPYQFGSVAITVIQLIGIIGVMSQVSWLVFLVFIPVVAASIWYQRYYIAAARELSRLVGVCKAPLIQHFSETISGATTIRSFSQEFRF 1149          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB6C_ARATH (ABC transporter C family member 6 OS=Arabidopsis thaliana GN=ABCC6 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.607e-29
Identity = 65/167 (38.92%), Postives = 103/167 (61.68%), Query Frame = 2
Query:   77 PNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            P VS   LI+VY+L+   S+  ++ R+L   + G + +  LF+Q+   +FRA MSF+D+TP+GR+L+R S+D S+ DL +P    +   A  N    +GV+  V WQVL V IPV+      ++YY + A+EL RL G ++S V +H +E+++G  TI +F+ E  F
Sbjct:  933 PPVSGFTLILVYVLLAVASSFCILIRALLVAMTGFKMATELFTQMHLRIFRASMSFFDATPMGRILNRASTDQSVADLRLPGQFAYVAIAAINILGIIGVIVQVAWQVLIVFIPVVAACAWYRQYYISAARELARLAGISRSPVVHHFSETLSGITTIRSFDQEPRF 1099          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.973e-29
Identity = 70/192 (36.46%), Postives = 111/192 (57.81%), Query Frame = 2
Query:   17 LTFVIGQILQNSWLA-----ANVENPNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            + F +  I  N W+A     +    P VS   LI+VY+ +   S+  ++ R++ S + G + +  LF+Q+   +FRA MSF+D+TP+GR+L+R S+D S VDL +P        A  N    +GV+  V WQVL V IPVI      ++YY + A+EL RL+G ++S +  H +E+++G  TI +F+ E  F
Sbjct:  930 ILFQVLNIGSNYWMAWVTPVSKDVKPLVSGSTLILVYVFLATASSFCILVRAMLSAMTGFKIATELFNQMHFRIFRASMSFFDATPIGRILNRASTDQSAVDLRLPSQFSNLAIAAVNILGIIGVMGQVAWQVLIVFIPVIAACTWYRQYYISAARELARLSGISRSPLVQHFSETLSGITTIRSFDQEPRF 1121          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.364e-29
Identity = 67/195 (34.36%), Postives = 112/195 (57.44%), Query Frame = 2
Query:    8 LSHLTFVIGQILQNSWLAANVEN-----PNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            L+   F + QI  N W+A          P +   R+++VY L+   S+L +++R++   + G+ ++++ FS++L S+FRAPMSF+DSTP GR+L+R S+D S++DL++   L +   +       + V++ V W                QRYY  TA+EL R++G  ++ + +H AES+AGA TI AF+  D F
Sbjct:  941 LAQSCFQMLQIASNYWMAWTAPPTAESIPKLGMGRILLVYALLAAGSSLCVLARTILVAIGGLSTAETFFSRMLCSIFRAPMSFFDSTPTGRILNRASTDQSVLDLEMAVKLGWCAFSIIQIVGTIFVMSQVAW----------------QRYYTPTARELSRMSGVERAPILHHFAESLAGATTIRAFDQRDRF 1119          

HSP 2 Score: 28.1054 bits (61), Expect = 9.364e-29
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  576 FFAKNLDLIDTNASPFFQTFAANEW 650
            F + NL LID+++ P+F   +A EW
Sbjct: 1119 FISSNLVLIDSHSRPWFHVASAMEW 1143          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.065e-28
Identity = 69/190 (36.32%), Postives = 107/190 (56.32%), Query Frame = 2
Query:   17 LTFVIGQILQNSWLAANVENPNVSTLR---LIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            LT+    +  + WLA      N  +      I+ Y++I  VS + +  RS     LG+++++  F Q+LNS+  APMSF+D+TP GR+LSR S+D + VD+ +PF L   V   T   S   V     W   F  IP+ +L I  + YY A+++EL R++  TK+ + +H +ESIAG MTI +F  ++ F
Sbjct:  965 LTWQGSLMASDYWLAYETSAKNAISFDASVFILGYVIIALVSIVLVSIRSYYVTHLGLKTAQIFFRQILNSILHAPMSFFDTTPSGRILSRASTDQTNVDILIPFMLGLVVSMYTTLLSIFIVTCQYAWPTAFFVIPLGWLNIWYRNYYLASSRELTRMDSITKAPIIHHFSESIAGVMTIRSFRKQELF 1154          

HSP 2 Score: 25.0238 bits (53), Expect = 2.065e-28
Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  694 LAAFCMVLLXXXTFTPXXIXMALSYGL 774
            ++A  MVLL      P  + ++LSYGL
Sbjct: 1193 ISALFMVLLPSNVIRPENVGLSLSYGL 1219          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.761e-28
Identity = 65/195 (33.33%), Postives = 111/195 (56.92%), Query Frame = 2
Query:    8 LSHLTFVIGQILQNSWLAANVEN-----PNVSTLRLIVVYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVTWQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            L+   F + QI  N W+A          P +   R+++VY L+   S+L +++R++   + G+ ++++ FS++L S+FRAPMS++DSTP GR+L+R S+D S++DL++   L +   +       + V++ V W                QRYY  T +EL R++G  ++ + +H AES+AGA TI AF+  D F
Sbjct:  488 LAQSCFQMLQIASNYWMAWTAPPTAESIPKLGMGRILLVYALLAAGSSLCVLARTILVAIGGLSTAETFFSRMLCSIFRAPMSYFDSTPTGRILNRASTDQSVLDLEMAVKLGWCAFSIIQIVGTIFVMSQVAW----------------QRYYTPTERELSRMSGVERAPILHHFAESLAGATTIRAFDQRDRF 666          

HSP 2 Score: 28.1054 bits (61), Expect = 7.761e-28
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 3
Query:  576 FFAKNLDLIDTNASPFFQTFAANEW 650
            F + NL LID+++ P+F   +A EW
Sbjct:  666 FISSNLVLIDSHSRPWFHVASAMEW 690          
BLAST of EY665055 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.714e-27
Identity = 71/182 (39.01%), Postives = 107/182 (58.79%), Query Frame = 2
Query:   53 WLAANVENPNVSTLRLIV---VYLLIGFVSTLFLMSRSLSSVVLGIRSSKSLFSQLLNSLFRAPMSFYDSTPLGRVLSRVSSDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVVT----WQVLFVSIPVIFLAIRLQRYYFATAKELMRLNGTTKSLVANHLAESIAGAMTIXAFEXEDXF 577
            WLA      N  +    V   VY++I  VS + +  R+     LG+++++  F Q+LNSL  APMSF+D+TP GR+LSR S+D + VD+ +P    F +G     Y+ L  + +VT    W  +F  IP+ +L I  + YY A+++EL RL+  TK+ V +H +ESIAG MTI AF+ +  F
Sbjct: 1000 WLAYETSAKNEVSFDATVFIRVYVIIAAVSIVLVCLRAFYVTHLGLKTAQIFFKQILNSLVHAPMSFFDTTPSGRILSRASTDQTNVDIFIP----FMIGLVATMYTTLLSIFIVTCQYAWPTVFFIIPLGWLNIWYRGYYLASSRELTRLDSITKAPVIHHFSESIAGVMTIRAFKKQPMF 1177          
The following BLAST results are available for this feature:
BLAST of EY665055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
AB10C_ARATH7.832e-9172.31ABC transporter C family member 10 OS=Arabidopsis ... [more]
AB8C_ARATH9.055e-4040.84ABC transporter C family member 8 OS=Arabidopsis t... [more]
AB5C_ARATH7.705e-3237.33ABC transporter C family member 5 OS=Arabidopsis t... [more]
AB3C_ARATH5.522e-3037.76ABC transporter C family member 3 OS=Arabidopsis t... [more]
AB6C_ARATH1.607e-2938.92ABC transporter C family member 6 OS=Arabidopsis t... [more]
AB7C_ARATH7.973e-2936.46ABC transporter C family member 7 OS=Arabidopsis t... [more]
AB9C_ARATH9.364e-2934.36ABC transporter C family member 9 OS=Arabidopsis t... [more]
AB4C_ARATH2.065e-2836.32ABC transporter C family member 4 OS=Arabidopsis t... [more]
AB15C_ARATH7.761e-2833.33Putative ABC transporter C family member 15 OS=Ara... [more]
AB14C_ARATH5.714e-2739.01ABC transporter C family member 14 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665055 ID=EY665055; Name=EY665055; organism=Citrus sinensis; type=EST; length=903bp
AGCCAGCCTCTCTCACCTTACATTTGTGATTGGTCAGATATTGCAGAACT
CTTGGCTGGCTGCCAATGTAGAAAATCCTAATGTCAGCACATTACGGCTG
ATAGTGGTTTACTTGTTGATTGGATTTGTCTCAACACTATTCCTGATGTC
TAGATCTCTCTCTAGTGTTGTTTTAGGTATTAGATCATCAAAATCTTTGT
TCTCACAGCTTTTAAATTCCCTTTTCCGTGCACCTATGTCTTTTTACGAC
TCCACACCTCTTGGAAGGGTACTTAGTCGGGTTTCTTCTGATCTGAGTAT
TGTCGACCTAGATGTTCCATTCAGTTTAATCTTTGCTGTCGGGGCTACCA
CAAATGCTTATAGTAATCTAGGAGTACTTGCTGTTGTCACATGGCAAGTC
CTATTCGTTTCCATACCAGTGATTTTCTTGGCAATTCGCTTGCAGAGATA
CTATTTTGCTACTGCAAAAGAATTGATGCGGCTTAACGGCACAACCAAGT
CCTTGGTAGCAAATCATCTAGCTGAGTCTATAGCAGGAGCCATGACAATT
ANGGCTTTTGAGGANGAAGATCNGTTTTTTTGCAAAGAACCTTGACCTCA
TTGATACCAATGCCAGTCCTTTCTTCCAAACTTTTGCAGCAAATGAGTGG
GNTGATCCAACGCCCTAGAACACTCAGTGCAACNNTGTATATCCTCGCAG
CATTCTGTATGGTTTTGCTTNCTNCTGNAACTTTTACCCCTGNATTNATT
NGAATGGCCCTTTCTTATGGTCTTCGTTAAACAGTCCCTAGTATGTCAAT
CCAAAACAGTGTACTCTANCAATTATATCATTCTGTAAAAGACTTTACCA
TACTGCATGTACCAGTGAAGCCCTGAGTAGTAGAAACAACCGCCCCACCA
CTG
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