EY665045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665045 vs. ExPASy Swiss-Prot
Match: RH49_ARATH (DEAD-box ATP-dependent RNA helicase 49 OS=Arabidopsis thaliana GN=RH49 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.371e-25 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 169 LYRWKELEVGKLAMGYGLLQLPSMSEVKIHSLSTKGFVPVKDIKLEDIKYKDKSREKQR 345 ++ WK LE+GKLAMGYG+L P +SEVK + GF PV+ I EDIKYK+KSREKQR Sbjct: 440 IFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKYKNKSREKQR 498 HSP 2 Score: 55.4546 bits (132), Expect = 7.371e-25 Identity = 23/29 (79.31%), Postives = 28/29 (96.55%), Query Frame = 2 Query: 5 KNRDVMEKGLRAFVSYIRAYKEHHCSYIF 91 K+R V+EKGL+AFVS++RAYKEHHCSYIF Sbjct: 413 KDRAVLEKGLQAFVSFVRAYKEHHCSYIF 441
BLAST of EY665045 vs. ExPASy Swiss-Prot
Match: RH55_ARATH (DEAD-box ATP-dependent RNA helicase 55 OS=Arabidopsis thaliana GN=RH55 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.673e-24 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 169 LYRWKELEVGKLAMGYGLLQLPSMSEVKIHSLSTKGFVPVKDIKLEDIKYKDKSREKQR 345 ++ WK LE+GKLAMGYG+L P +SEVK + GF PV+ I EDIK+K+KSREKQR Sbjct: 347 IFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQR 405 HSP 2 Score: 54.299 bits (129), Expect = 4.673e-24 Identity = 22/29 (75.86%), Postives = 28/29 (96.55%), Query Frame = 2 Query: 5 KNRDVMEKGLRAFVSYIRAYKEHHCSYIF 91 K+R+V+EKGL+AFVS++RAYKEH CSYIF Sbjct: 320 KDREVLEKGLKAFVSFVRAYKEHQCSYIF 348
BLAST of EY665045 vs. ExPASy Swiss-Prot
Match: RH18_ARATH (DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana GN=RH18 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.727e-19 Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 169 LYRWKELEVGKLAMGYGLLQLPSMSEVKIHSLSTKGFVPVKDIKLEDIKYKDKSREKQRXXXXXXXXXXXXXXXXXXXXNKASDAATTVMRKKTAKQXT 465 ++RWK+LE+GKLAMGYGLL LPSMSEVK H LS++GF PV+ +K E+IK+KDK REKQR K DA+ + KK +++ T Sbjct: 449 IFRWKDLEIGKLAMGYGLLYLPSMSEVKQHRLSSEGFTPVEGVKFEEIKFKDKYREKQRQQNLQVRKEKRQEEKKEKGKRKRVDASASNDPKKASRKLT 547 HSP 2 Score: 80.1073 bits (196), Expect = 1.907e-14 Identity = 59/195 (30.26%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 5 KNRDVMEKGLRAFVSYIRAYKEHHCSYIFRSLLPSIHNFSLHFLLFRYNVFYPSYYIGGKNLRSGNWLWVMAYYNFLQCLR*RSILFPPRVSSQLKTSSWRTSSTRINHVRNKGRRICKQRKRHSRKNQNDRNQTRPQMLQLL**GRKQQNXRRAT-QAIEDEDELARDYRLLKKLKKGSIDESEFAKMTGTEEL 586 K+R VMEKGL+AFVS++RAYKEHHCS+IFR + + L Y + Y K R + + ++ ++ I F + + + + + + R + ++ +RKR ND + RK +R T Q EDE+ + RDY+L+ K+KKG I E E+ ++TG ++L Sbjct: 422 KDRAVMEKGLKAFVSFVRAYKEHHCSFIFR-----WKDLEIGKLAMGYGLLYLPSMSEVKQHRLSS-----EGFTPVEGVKFEEIKFKDKYREKQRQQNLQVRKEK----RQEEKKEKGKRKRVDASASNDPKKA----------SRKLTGKQRQTIQTAEDEEVMDRDYKLMIKVKKGLIKEDEYERLTGDDDL 592
BLAST of EY665045 vs. ExPASy Swiss-Prot
Match: RH18_ORYSJ (DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica GN=Os01g0164500 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.842e-18 Identity = 47/97 (48.45%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 169 LYRWKELEVGKLAMGYGLLQLPSMSEVKIHSLSTKGFVPVKDIKLEDIKYKDKSREKQRXXXXXXXXXXXXXXXXXXXXNKASDAATTVMRKKTAKQ 459 ++ WK+LE+G+L M YGLLQ+PSM EVK HSLS +GF PVKD+ + IKYKDK+REKQR KA + RKKT KQ Sbjct: 459 IFSWKDLEIGRLGMEYGLLQIPSMPEVKHHSLSLEGFTPVKDVDVTKIKYKDKAREKQRQKTLKRKAEELALRPEIEKRRKAPEKPEKPKRKKTGKQ 555 HSP 2 Score: 80.8777 bits (198), Expect = 1.118e-14 Identity = 65/197 (32.99%), Postives = 90/197 (45.69%), Query Frame = 2 Query: 5 KNRDVMEKGLRAFVSYIRAYKEHHCSYIFRSLLPSIHNFSLHFLLFRY----NVFYPSYYIGGKNLRSGNWLWVMAYYNFLQCLR*RSILFPPRVSSQLKTSSWRTSSTRINHVRNKGRRICKQRKRHSRKNQNDRNQTRPQMLQLL**GRKQQNXRRATQAIEDEDELARDYRLLKKLKKGSIDESEFAKMTGTEE 583 ++R+VMEKGL AFVS++RAYKEHHCSYIF I + + L + V + S + G + + Y + R + KT + + I K+RK + + R +T Q R+A Q ED DELA +YRLLKKLK+G IDE E+ K+TG E Sbjct: 432 EDRNVMEKGLTAFVSFVRAYKEHHCSYIFSWKDLEIGRLGMEYGLLQIPSMPEVKHHSLSLEGFTPVKDVDVTKIKYKD------------KAREKQRQKTLKRKAEELALR------PEIEKRRKAPEKPEKPKRKKTGKQ--------------RQAVQTKEDMDELANEYRLLKKLKRGVIDEDEYEKLTGFGE 596 The following BLAST results are available for this feature:
BLAST of EY665045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665045 ID=EY665045; Name=EY665045; organism=Citrus sinensis; type=EST; length=902bpback to top |