EY665037

Overview
NameEY665037
Unique NameEY665037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5695 contig Csv1_Contig5695:54..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665037 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.445e-46
Identity = 105/192 (54.69%), Postives = 131/192 (68.23%), Query Frame = 1
Query:   64 CLEALSSQLVLPASKSGVYQFSSVK--YLPGTLQRNVSLSVRCMAKNEQQKDQ-----------STQPP-----KLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 585
            C   +S+ +   +S+S V QF+++   Y+P TL+RNVSL VR MA+ E ++             ST  P     + P++STKFSD+ AFSGPAPERINGRLAMIGFVAA+ VE++KGQ +  QLS GGVAWFLGT          P F+GVSVESKS   M+SDAE WNGR AM+GLVALA TEFVKG++LV
Sbjct:    6 CQSIMSNSMTNISSRSRVNQFTNIPSVYIP-TLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196          
BLAST of EY665037 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.025e-34
Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 1
Query:  154 LQRNVSLSVRCMAKN------EQQKDQSTQP------PKLPRISTKFS-DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 585
            ++RN   +VR M ++      +QQK Q T        P    ++TK + D+F+F G APERINGR AMIGFVAA+ VEL+ G+DVF+Q+ +GGV WFL T          P+++G+S E+K++GF  SDAE+WNGRFAM+GLVALA TE+VKG  L+
Sbjct:   41 MRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197          
BLAST of EY665037 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.554e-30
Identity = 72/164 (43.90%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  100 ASKSGVYQFSSVKYLP-GTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 585
            A+   +  F+    LP G+ +   +L  R +    Q +  +  PP  P+ ST   D  AFSGPAPERINGRLAM+GFV ALAVE  +G  + +QL  G G AWF  T          PL +G S E ++   M ++AELWNGRFAM+GLVALA TE + G+  +
Sbjct:    2 ATMMAMSSFAGAAVLPRGSARSLPALGRRTLVVRAQTEGPNAPPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITGTPFI 165          
BLAST of EY665037 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.520e-30
Identity = 68/140 (48.57%), Postives = 85/140 (60.71%), Query Frame = 1
Query:  169 SLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 585
            +L  R +    Q +  S  PP  P+ ST   D  AFSGPAPERINGRLAM+GFV ALAVE  +G  + +QL  G G AWF  T          PL +G S E ++   M ++AELWNGRFAM+GLVALA TE + G+  +
Sbjct:   31 ALGRRALVVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170          
BLAST of EY665037 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.827e-29
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 1
Query:  220 TQPPKLPRISTKFS-----DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLS--DGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 585
            T  P  P+  TK +     D  AFSGPAPERINGRLAM+GFVAAL+VE ++G  +  Q+     G+AWFL T          PL +G SVESKS G  ++DAELWNGRFAM+GLVALA TEF+ G+  V
Sbjct:  101 TTIPAAPKPVTKKANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229          
BLAST of EY665037 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14
Identity = 64/176 (36.36%), Postives = 81/176 (46.02%), Query Frame = 1
Query:   85 QLVLPASKSGVYQFSSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPR--------ISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSD--GFMTSDAELWNGRFAMMGLVALAVTEFVKGSTL 582
            QL +    S +   +S+   P  L R  +    C      + + ST PP  P          +   ++V  FSG APE INGRLAM+GFVAAL  ELS G+ V  QL D      L T          P F       K D  G  T DAE+ NGRFAM+G  A+ V E ++G  L
Sbjct:    2 QLHMNLPTSRIAAGASINVRPAPLLRTAAPKRVCKHIVRAENNPSTPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEMTNGRFAMIGFAAMLVYEGIQGIAL 171          
The following BLAST results are available for this feature:
BLAST of EY665037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ELI_PEA3.445e-4654.69Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL3.025e-3449.68Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI6_HORVU1.554e-3043.90Low molecular mass early light-inducible protein H... [more]
ELI9_HORVU4.520e-3048.57Low molecular mass early light-inducible protein H... [more]
ELI5_HORVU3.827e-2954.26High molecular mass early light-inducible protein ... [more]
CBR_DUNBA1.561e-1436.36Carotene biosynthesis-related protein CBR, chlorop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-C11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665037 ID=EY665037; Name=EY665037; organism=Citrus sinensis; type=EST; length=796bp
TGCTAAATTATTCCTCCGTTGCATAATCTACAAACCTGGCTGCTTCACTC
GCCACTCAATCTATGCTTGGAAGCTCTGTCGTCGCAGCTCGTGTTACCGG
CATCAAAATCTGGGGTGTACCAATTTTCCTCTGTTAAGTACTTACCTGGT
ACTCTGCAGAGAAATGTTAGCTTATCAGTGCGCTGCATGGCTAAGAATGA
GCAGCAGAAGGATCAATCAACTCAGCCACCAAAGCTACCGCGTATAAGCA
CGAAGTTCTCTGACGTGTTTGCGTTCAGCGGGCCGGCACCGGAGAGGATA
AACGGGAGGCTTGCGATGATTGGGTTCGTGGCTGCATTGGCGGTGGAGCT
ATCCAAGGGTCAGGATGTGTTTGCCCAGTTATCAGACGGTGGAGTTGCCT
GGTTCTTGGGGACCAGTGTTCTGCTTTCGGTTGCGTCCCTGGTTCCTTTG
TTTAAAGGTGTCAGCGTGGAGTCTAAATCGGATGGGTTCATGACTTCGGA
TGCTGAGTTGTGGAATGGGAGGTTCGCTATGATGGGTCTTGTTGCTTTGG
CTGTCACTGAGTTTGTTAAAGGCAGTACCCTTGTTTAGTTAAGTCCAATT
TTCCAGTGATATGCGGACTGCAGAGTCTTGAAATGATAACAAGACCCTAT
TCTTAATACTTGAAGCGCACGTCATGTTTCTTCCGTGGCTAATTATTGTG
TATGAATTATGGNGGTNGTTGTATGTAAATCTCTGTTTTCCCATGCCAAT
TCTCTAAATAATCACCCTTTTCCGTTTTGAAAAAAAAAAAAAAAAA
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