EY665024

Overview
NameEY665024
Unique NameEY665024
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7601 contig Csv1_Contig7601:591..1383. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 4.270e-65
Identity = 110/152 (72.37%), Postives = 122/152 (80.26%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPANCASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPECLA 488
            RVNL      DYH YTILW+H HIVFYVDDVPIR YKN+      +P +QP+  YSTLWE+DDWATRGGLEKIDWSKAPFYAYY DFDIEGCP PGP  C SNP NWWE   YQ+L A+EAR YRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct:  141 RVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.163e-62
Identity = 105/154 (68.18%), Postives = 123/154 (79.87%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPANCASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI 494
            RVNL      D+H Y I WNH  IVFYVD+VPIRVYKN+   + P+P  QP+  YSTLWE+DDWATRGG+EKI+WS+APFYAYY DFDIEGCP PGPA+C +N  NWWE + Y  L+ +EAR YRWVR+NHM+YDYCTDKSR+PVPPPEC AGI
Sbjct:  140 RVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPECSAGI 293          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.280e-42
Identity = 78/151 (51.66%), Postives = 100/151 (66.23%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPAN-CASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            R+NL      DYH Y++LWN + IVF+VDDVPIRV+KNS      FP NQP+  YS+LW +DDWATRGGLEK +W KAPF A Y  F ++GC     A  C +    WW+   +Q L A + +  +WVR  + IY+YCTD+ R+PVPPPEC
Sbjct:  137 RINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.292e-41
Identity = 76/153 (49.67%), Postives = 99/153 (64.71%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPAN---CASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            R+ L       YH Y++LWN + IV +VDDVPIR +KNS      FP NQP+  YS+LW++DDWATRGGLEK +W+ APF A Y  F ++GC    P     C +    WW+   +Q L A++ R  RWVR  + +Y+YCTDK+RYPVPPPEC
Sbjct:  138 RIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.640e-40
Identity = 76/153 (49.67%), Postives = 95/153 (62.09%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPAN---CASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            R+ L       YH Y++LWN   IV +VDDVPIR +KNS      FP NQP+  YS+LW++DDWATRGGLEK DWS APF A Y  F ++GC    P     C +    WW+   +Q L A++ R  RWVR  + IY+YCTD+ RYP  PPEC
Sbjct:  137 RIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.109e-40
Identity = 74/154 (48.05%), Postives = 100/154 (64.94%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAP----FPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPF--PGPANCASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            R +L      DYH Y+ILWN+H +VF+VD VPIRVYKNS + P    FP  +P++ +S++W +DDWATRGGLEK DW KAPF + Y DF +EGC +  P PA  ++   NWW+  +   L+  +   Y WV+ N ++YDYC D  R+P  P EC
Sbjct:  133 RHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPACVSTTTENWWDQYDAWHLSKTQKMDYAWVQRNLVVYDYCKDSERFPTLPWEC 286          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.529e-38
Identity = 77/152 (50.66%), Postives = 98/152 (64.47%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPAN-CASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYP-VPPPEC 482
            R+ L      +YH Y+ILWN + IVF+VD+VPIRV+KNS      FP +QP+  Y++LW +DDWATRGGLEK DWSKAPF A Y  F I+GC     A  C +    WW+   ++ L A + R  RWVR  + IY+YCTD  RYP + PPEC
Sbjct:  138 RIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPEC 289          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.997e-38
Identity = 73/151 (48.34%), Postives = 99/151 (65.56%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPAN-CASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            R+ L       YH Y++LWN + IVF+VD++PIRV+KN+      FP NQP+  YS+LW +DDWATRGGLEK +W+ APF A Y  F I+GC     A  CA+    WW+ N ++ L A + R  +WVR+   IY+YCTD++R+PV P EC
Sbjct:  139 RIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 289          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.997e-38
Identity = 75/151 (49.67%), Postives = 94/151 (62.25%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPAN-CASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            R+ L       YH Y++LWN + IVFYVDD PIRV+KNS      FP NQP+  Y++LW +DDWATRGGLEK DWSKAPF A Y  F I+GC     A  C +    WW+   ++ L A + +   WVR  + IY+YCTD+ RY   PPEC
Sbjct:  136 RIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286          
BLAST of EY665024 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.609e-38
Identity = 74/151 (49.01%), Postives = 92/151 (60.93%), Query Frame = 3
Query:   39 RVNLLLKTPADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPIFFYSTLWESDDWATRGGLEKIDWSKAPFYAYYIDFDIEGCPFPGPAN-CASNPGNWWEANNYQALTAMEARIYRWVRLNHMIYDYCTDKSRYPVPPPEC 482
            R+ L      DYH Y++LWN + I F+VDD PIRV+KNS      +P +QP+  YS+LW +DDWATRGG EK DWSKAPF A Y  F ++GC     A  CA+    WW+   +Q L A + R   WVR  H IY+YCTD  RY    PEC
Sbjct:  137 RIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287          
The following BLAST results are available for this feature:
BLAST of EY665024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH6_ARATH4.270e-6572.37Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH1.163e-6268.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH2.280e-4251.66Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC3.292e-4149.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC3.640e-4049.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH8.109e-4048.05Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN1.529e-3850.66Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB1.997e-3848.34Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTHA_PHAAN1.997e-3849.67Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_WHEAT2.609e-3849.01Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665024 ID=EY665024; Name=EY665024; organism=Citrus sinensis; type=EST; length=793bp
GCCGGNATTCACACCCCGACCCAGCGTCCGANAGAACTAGAGTGAACCTT
TTGTTAAAAACTCCTGCAGATTATCACCTTTACACTATTCTCTGGAACCA
TCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAA
ACAGTGGAAGGGCTCCATTTCCAATGAACCAACCCATTTTTTTTTATTCA
ACGCTGTGGGAATCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAAAT
AGATTGGAGCAAAGCTCCTTTTTATGCTTATTACATAGACTTTGATATTG
AGGGCTGCCCATTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTAAC
TGGTGGGAGGCAAATAATTATCAAGCCCTCACCGCCATGGAAGCAAGAAT
ATACAGATGGGTTCGTCTCAACCACATGATCTATGATTATTGCACTGATA
AATCAAGATACCCAGTACCCCCACCGGAATGCCTTGCCGGCATATAAATT
CAACCCGCCAATTAATTAAGCAGTTGGACGGTACTCCATATCCGTATCAT
ATCATGTATATTACTTCACGTACACGTCCTTTGTATTATTCCCTATTCGT
GTGAAAAGACTTATACGCATATCAAGGGAGGGGCGGGAGGGGAAATAAAC
ATTGTGTGCATTTAAATGTAATTATGGGAGTGGGAAATATGTGGGTTTTC
TGCTCTGCTTGTACCATATATAAGTCTGAATTTGATGCACAGTATTCTGT
GCCAATAAAAGCTTCTTCATAAAAAAAAAAAAAAAAAAAAAAA
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