EY665013

Overview
NameEY665013
Unique NameEY665013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665013 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.622e-23
Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 2 
Query:   20 AFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRSR 274
            A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L  +IEE+NK+ AY  TK DP+ L+E  + R
Sbjct:  156 ALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDPQFLLEHTKKR 240
[Close]
BLAST of EY665013 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.622e-23
Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 2 
Query:   20 AFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRSR 274
            A D +E AL KF+DGPFFLGQFS VDIAY+PF+ERFQIF S    YDIT GRP L  +IEE+NK+ AY  TK DP+ L+E  + R
Sbjct:  156 ALDKIEAALSKFNDGPFFLGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNLQKFIEEVNKIHAYTETKQDPQFLLEHTKKR 240
[Close]
BLAST of EY665013 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20
Identity = 46/84 (54.76%), Postives = 60/84 (71.43%), Query Frame = 2 
Query:   20 AFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 271
            A D +E AL KF DGPFFLGQFS VDIAY+  +ER QI+ S   KY+IT GRP L  +IEE+N+++AY  TK DP  L++  ++
Sbjct:  155 ALDKIEAALSKFGDGPFFLGQFSLVDIAYVTIIERIQIYYSHIRKYEITNGRPNLEKFIEEINRIEAYTQTKNDPLYLLDLAKT 238
[Close]
BLAST of EY665013 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.052e-19
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 2 
Query:   20 AFDYLEKALDKFDDGPFFLGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKLAAWIEELNKLDAYKSTKADPKQLVEFYRS 271
            A D LE  L KFDDGPFFLGQFS  D+AY+  +ER QI+ S    YDI  GRP L  +I+E+NK++AY  TK DP  L++  +S
Sbjct:  155 ALDKLEADLSKFDDGPFFLGQFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNLQEFIDEMNKIEAYAQTKNDPLFLLDLAKS 238
The following BLAST results are available for this feature:
BLAST of EY665013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
IN21B_ORYSJ1.622e-2362.35Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI1.622e-2362.35Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ6.378e-2054.76Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE7.052e-1953.57Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-073-A08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665013 ID=EY665013; Name=EY665013; organism=Citrus sinensis; type=EST; length=638bp
CAGCATATCAGCTGGTCCTGCTTTTGATTACTTAGAGAAGGCCCTTGATA
AATTTGATGATGGCCCGTTCTTCCTTGGACAGTTCAGTCAGGTGGACATA
GCCTATATTCCATTTGTTGAGAGATTCCAGATCTTCTTATCAGAAGAATT
TAAGTATGACATCACTGCAGGCAGGCCTAAACTGGCAGCATGGATTGAGG
AGTTGAACAAGCTCGATGCTTACAAGTCAACAAAAGCAGATCCAAAACAA
CTCGTTGAATTTTACAGGAGCCGCTTCGTGGCCAAGCAGTGAACCTGCAA
TCAGTCGTCTTAGAAGCGCACTGAATCAGTTGGTGGCGTGGTTTGTGAAA
TCTCGTATAATAAAGCTGCGCGTTATACACATTACATATTGTTTGCCGAT
GTGAGCTTGTGTACGTTGCTGGATATTGAATGAGTTGATGACTTGTTGAT
ATCTCGTATGACAGAATGCTATCTCATATGTACCTATATGTTTGTTGACT
GCCGTCTTGTTTATTATCTTAAAAGTATTAGTGTTTGTTTAGCGTTGTGC
TATCATTAATAAAAATTGATGCCATTGGGCATTGGGTNAAAAAAAAAAAA
AANNAANNNNAAANANAAAAAAAANANAAAAAAAAAAA
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