EY665001

Overview
NameEY665001
Unique NameEY665001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 4.907e-69
Identity = 117/189 (61.90%), Postives = 145/189 (76.72%), Query Frame = 1
Query:   34 GADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEFEALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKKSAASTSGSPR 600
            G D+ S   P+ K   +  R++QYYLD++TPH   RWIGTL    IY LRVY + GFYI++Y              SP +DPE E  DGA+LPT+GSDEF+PFIRRLPEFKFWY++TKAFC+AFLMTFFS+FDVPVFWPILLCYW+VLFVLTM+RQ+ HMIK++YIPFS GKQKY+G+KS+A++ G  R
Sbjct:    5 GGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHGFYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYSGRKSSANSGGGSR 193          
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.078e-66
Identity = 116/184 (63.04%), Postives = 140/184 (76.09%), Query Frame = 1
Query:   34 GADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEFEAL-DGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKKSAAS 582
            G D+ S   P+ +   +  R++Q+YLD++TPH   RWIGTL  A IY LRVY +QGFYI+ Y              SP +DPE   + DG SLPT+GSDEF+PFIRRLPEFKFWY++TKAFC+AFLMTFFS+FDVPVFWPILLCYWIVLFVLTM+RQ+ HMIKY+YIPFSFGKQKY G+ S+ S
Sbjct:    5 GGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKYGGRSSSGS 188          
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.890e-53
Identity = 97/184 (52.72%), Postives = 128/184 (69.57%), Query Frame = 1
Query:   37 ADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEFEALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKKSAASTS 588
            +D++S    + +    FS+  Q+ LD++ PH L RWI  L    IY++RVY V+GFYI+TY              SP+ DPE     G SLPT+ SDE+RPF+RRLPEFKFW +I +AF + F+MTFF +FDVPVFWPILL YW++LF LTM++Q+ HMIKYRY+PFSFGK++Y GKK A + S
Sbjct:   28 SDSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITYAIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQY-GKKPAPTES 210          
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1_RAT (Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.102e-50
Identity = 95/193 (49.22%), Postives = 129/193 (66.84%), Query Frame = 1
Query:   22 HGRPGADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKKSAASTSGS 594
            HG+P          + ++ S   +++Q +LD+STP+   RW+ TL  + +Y++RVY +QG+YIVTY              SPK+DP    ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK   VA + TFF  F+VPVFWPIL+ Y+I+LF +TMKRQ+ HMIKYRYIPF+ GK++Y GK+    T  S
Sbjct:   12 HGKPSV--------VYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYKGKEDVGKTFAS 196          
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1_MOUSE (Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.102e-50
Identity = 95/193 (49.22%), Postives = 129/193 (66.84%), Query Frame = 1
Query:   22 HGRPGADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKKSAASTSGS 594
            HG+P          + ++ S   +++Q +LD+STP+   RW+ TL  + +Y++RVY +QG+YIVTY              SPK+DP    ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK   VA + TFF  F+VPVFWPIL+ Y+I+LF +TMKRQ+ HMIKYRYIPF+ GK++Y GK+    T  S
Sbjct:   12 HGKPSV--------VYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYKGKEDVGKTFAS 196          
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 6.663e-50
Identity = 96/193 (49.74%), Postives = 128/193 (66.32%), Query Frame = 1
Query:   22 HGRPGADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKKSAASTSGS 594
            HG+P          + ++ +   +++Q +LD+STPH   RW+ TL  + IY++RVY +QG+YIVTY              SPK+DP    ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK   VA + TFF  F+VPVFWPIL+ Y+I+LF +TMKRQ+ HMIKYRYIPF+ GK+ Y GK+ A     S
Sbjct:   12 HGKPSV--------VYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRTYKGKEDAGKAFAS 196          
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1_PONAB (Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.939e-49
Identity = 94/193 (48.70%), Postives = 129/193 (66.84%), Query Frame = 1
Query:   22 HGRPGADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKKSAASTSGS 594
            HG+P          + ++ +   +++Q +LD+STP+   RW+ TL  + +Y++RVY +QG+YIVTY              SPK+DP    ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK   VA + TFF  F+VPVFWPIL+ Y+I+LF +TMKRQ+ HMIKYRYIPF+ GK++Y GK+ A     S
Sbjct:   12 HGKPSV--------VYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYRGKEDAGKAFAS 196          
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1_HUMAN (Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.939e-49
Identity = 94/193 (48.70%), Postives = 129/193 (66.84%), Query Frame = 1
Query:   22 HGRPGADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKKSAASTSGS 594
            HG+P          + ++ +   +++Q +LD+STP+   RW+ TL  + +Y++RVY +QG+YIVTY              SPK+DP    ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK   VA + TFF  F+VPVFWPIL+ Y+I+LF +TMKRQ+ HMIKYRYIPF+ GK++Y GK+ A     S
Sbjct:   12 HGKPSV--------VYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRYRGKEDAGKAFAS 196          
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.307e-49
Identity = 95/193 (49.22%), Postives = 128/193 (66.32%), Query Frame = 1
Query:   22 HGRPGADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKKSAASTSGS 594
            HG+P          + ++ +   +++Q +LD+STP+   RWI TL  + IY++RVY +QG+YIVTY              SPK+DP    ++ DG SLPT+ ++EFRPFIRRLPEFKFW++ TK   VA   TFF  F+VPVFWPIL+ Y+I+LF +TMKRQ+ HMIKYRYIPF+ GK+KY GK+    T  S
Sbjct:   12 HGKPSV--------VYRFFTRLGQIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMACTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRKYKGKEDVGKTFAS 196          
BLAST of EY665001 vs. ExPASy Swiss-Prot
Match: RER1_CAEEL (Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42
Identity = 85/161 (52.80%), Postives = 106/161 (65.84%), Query Frame = 1
Query:   97 FQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDP--EFEALD-GASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQMMHMIKYRYIPFSFGKQKYTGKK 570
            +QYYLDR TPH   RW+  L +   +  R+  +QGFYIV Y              +P IDP  EFE  D G  LP+K +DEFRPF+RRLPEFKFW++  KA  +A   TFF  FDVPVFWPIL+ Y+ +L  LT+KRQ+MHMIKYRYIPF+ GK +  GK+
Sbjct:   23 YQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGIYYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAITCTFFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYIPFTVGKPRMAGKE 183          
The following BLAST results are available for this feature:
BLAST of EY665001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
RER1B_ARATH4.907e-6961.90Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=... [more]
RER1A_ARATH5.078e-6663.04Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=... [more]
RER1C_ARATH2.890e-5352.72Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=... [more]
RER1_RAT5.102e-5049.22Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=... [more]
RER1_MOUSE5.102e-5049.22Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1[more]
RER1_BOVIN6.663e-5049.74Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2[more]
RER1_PONAB1.939e-4948.70Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1[more]
RER1_HUMAN1.939e-4948.70Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1[more]
RER1_CHICK3.307e-4949.22Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1[more]
RER1_CAEEL1.346e-4252.80Protein RER1 homolog OS=Caenorhabditis elegans GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-H08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665001 ID=EY665001; Name=EY665001; organism=Citrus sinensis; type=EST; length=793bp
GAATTTGTAAGCTTAAAAAACCATGGAAGACCAGGGGCTGATGCTGCTTC
TGCGGTGGCCCCCATTGCAAAGTGGAGAAGTGATTTCTCGAGGATGTTTC
AGTACTATCTGGATCGATCAACCCCGCATCCATTGCAGAGGTGGATTGGA
ACTCTTGCCGCTGCGTCGATTTACTTGTTGCGTGTTTACTGTGTTCAAGG
GTTTTACATTGTCACATATGGCTTAGGAATCTATATTCTGAATTTGTTGA
TTGGATTCCTATCGCCGAAGATTGATCCGGAGTTTGAAGCCTTGGATGGA
GCTTCATTGCCAACTAAAGGGTCTGATGAGTTTAGGCCATTCATTCGCCG
TCTTCCTGAGTTTAAGTTCTGGTATGCCATCACAAAGGCTTTCTGTGTGG
CTTTCCTTATGACTTTCTTTTCTATATTTGATGTTCCTGTCTTTTGGCCC
ATATTGCTGTGCTATTGGATTGTTCTGTTTGTCCTTACAATGAAGCGCCA
AATGATGCACATGATTAAGTATAGATATATTCCGTTCAGCTTTGGGAAGC
AGAAGTATACTGGGAAAAAGTCTGCTGCCAGTACCAGTGGCTCGCCAAGG
GACTAAAGTGAAGTGGTAGGCAAATATAGGATAACTGGAAACTCACAACC
TTCCTATACTTGCTCTTTTAGATTTTTTTTTTTTTTTTTGCCCCGTTTAT
GAATTGTTTAATTTCAGAAAGAAAACATGTTTCATGTCAAATACAAATGN
CAAGTTCAAGTGTNNNAAANNAAAANNNNAAAAAAAAAAAAAA
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