EY664987

Overview
NameEY664987
Unique NameEY664987
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7101 contig Csv1_Contig7101:33..869. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.983e-71
Identity = 127/156 (81.41%), Postives = 138/156 (88.46%), Query Frame = 1
Query:  124 VADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKDV 591
            VADISGLTPCK+SKQFAKR              YAP+SAPALA+ A +EKTKRRFDNYGKYGLLCGSDGLPHLIV+GDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASR++FRGF WPVAAYREF+NG+L+ KDV
Sbjct:   66 VADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.401e-69
Identity = 125/151 (82.78%), Postives = 132/151 (87.42%), Query Frame = 1
Query:  127 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 579
            ADISGLTPCKESKQFAKR              YAPDSAPALAIKATMEKTKRRFDNYGK GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI  EKKP  KEIIIDVPLA++L+FRGFSWPVAAYRE++NGEL+
Sbjct:   78 ADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.501e-68
Identity = 125/152 (82.24%), Postives = 131/152 (86.18%), Query Frame = 1
Query:  124 VADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 579
            +ADI+GLTPCKESKQFAKR              YA DSAPALAIKATMEKTK+RFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIAI  EKKP  KEIIIDVPLAS L+FRGFSWPVAAYRE +NGELV
Sbjct:   76 MADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 8.623e-67
Identity = 120/154 (77.92%), Postives = 134/154 (87.01%), Query Frame = 1
Query:  127 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            ADI+GLTPCKESK FAKR              YAPDSAPALAI+AT++KTKRRF+NYGK+GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIA+SGEKKPAM+EIIIDV LA+R++ RGF WPVAAYRE +NG+LVV D
Sbjct:   77 ADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_GUITH (Photosystem I reaction center subunit III OS=Guillardia theta GN=psaF PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.601e-42
Identity = 79/154 (51.30%), Postives = 100/154 (64.94%), Query Frame = 1
Query:  127 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            AD++GL PCK SK+F +R              Y P++ P LA++  + KTK RF  YG  GLLCG+DGLPHLI  G   H GEF+ PGL FLYIAGWIGWVGR+Y+   S   KP  KEIIIDVP+A   +  G+ WP AA++EF +G L+ K+
Sbjct:   22 ADVAGLVPCKNSKEFQRRLDSSVKKLESRLSKYEPNTPPYLALETQINKTKNRFTQYGNAGLLCGTDGLPHLIADGRWSHAGEFMVPGLFFLYIAGWIGWVGRNYVQFASQTDKPTEKEIIIDVPVALSFISTGYIWPFAAFKEFTSGNLIAKE 175          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_PORYE (Photosystem I reaction center subunit III OS=Porphyra yezoensis GN=psaF PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.139e-41
Identity = 78/154 (50.65%), Postives = 104/154 (67.53%), Query Frame = 1
Query:  127 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            A+++GL PCK+S  F KR              Y  D+ PALA+   +EKTK RF  YG+ GLLCG+DGLPHLI  G     G+F+ PGLLFLYI GWIGWVGR YL++++   KP  KEII+DVPLA + +  GF+WP+AA++EF +G+L+  +
Sbjct:   20 AEVAGLVPCKDSAAFNKRMVNSVKKLQARLAKYDADTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAIKFMSSGFAWPLAAWQEFSSGQLIASN 173          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_PORPU (Photosystem I reaction center subunit III OS=Porphyra purpurea GN=psaF PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.386e-40
Identity = 77/151 (50.99%), Postives = 103/151 (68.21%), Query Frame = 1
Query:  127 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 579
            A+++GL PCK+S  F KR              Y  ++ PALA+   +EKTK RF  YG+ GLLCG+DGLPHLI  G     G+F+ PGLLFLYI GWIGWVGR YL++++   KP  KEII+DVPLA + +  GF+WP+AA++EF +G+L+
Sbjct:   24 AEVAGLIPCKDSAAFNKRMVNSVKKLQARLAKYDANTPPALALNKQIEKTKTRFATYGRAGLLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEIILDVPLAVKFMSSGFAWPLAAWQEFSSGQLI 174          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_CHLRE (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAF PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.386e-40
Identity = 86/159 (54.09%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  124 VADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQR----HWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            +ADI+GLTPC ESK +AK               Y  DSAPA+A+KATME+TK RF NY K GLLCG+DGLPHLI          H GE   P   FLY+AG+IG+VGR YLIA+ GE KP  KEIIIDVPLA++L ++G  WP+AA +E   G L+ K+
Sbjct:   61 MADIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKE 219          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_CYAPA (Photosystem I reaction center subunit III OS=Cyanophora paradoxa GN=psaF PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.460e-39
Identity = 78/154 (50.65%), Postives = 101/154 (65.58%), Query Frame = 1
Query:  127 ADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 588
            AD++GL PC +S  F +R              Y P SAPA A++  ++KT++RFD Y   GLLCG+DGLPHLI  G   H GEF  PGLLFLYIAG+IGW GRSYL A++       KEIIID+P+A + V +GF WP+AA +EF +G+L  +D
Sbjct:   25 ADVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKTQQRFDKYRNSGLLCGADGLPHLITDGRWSHAGEFTIPGLLFLYIAGFIGWSGRSYLQAVAASDNSTEKEIIIDIPVALQSVSKGFVWPLAALQEFSSGKLTARD 178          
BLAST of EY664987 vs. ExPASy Swiss-Prot
Match: PSAF_GRATL (Photosystem I reaction center subunit III OS=Gracilaria tenuistipitata var. liui GN=psaF PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.695e-38
Identity = 79/156 (50.64%), Postives = 100/156 (64.10%), Query Frame = 1
Query:  130 DISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVV--KDV 591
            + +GLT C+ES  F KR              Y  ++ PA+A++  + KTK RF+ Y K G+LCG+DGLPHLI  G   H GEF+ PG+LFLYI GWIGWVGR YL  IS   KP  KEII+DVPLA +    GF+WP+AA +E  +GELV   KD+
Sbjct:   27 ETAGLTKCQESPAFTKRLNNSVKKLETRLAKYDANTPPAIALQTQIIKTKIRFNKYAKSGILCGTDGLPHLITDGRWNHAGEFMIPGVLFLYITGWIGWVGRGYLRDISQTTKPTEKEIILDVPLALKYCLSGFTWPLAAIKELTSGELVADNKDI 182          
The following BLAST results are available for this feature:
BLAST of EY664987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PSAF_ARATH1.983e-7181.41Photosystem I reaction center subunit III, chlorop... [more]
PSAF_FLATR5.401e-6982.78Photosystem I reaction center subunit III, chlorop... [more]
PSAF_SPIOL3.501e-6882.24Photosystem I reaction center subunit III, chlorop... [more]
PSAF_HORVU8.623e-6777.92Photosystem I reaction center subunit III, chlorop... [more]
PSAF_GUITH9.601e-4251.30Photosystem I reaction center subunit III OS=Guill... [more]
PSAF_PORYE2.139e-4150.65Photosystem I reaction center subunit III OS=Porph... [more]
PSAF_PORPU1.386e-4050.99Photosystem I reaction center subunit III OS=Porph... [more]
PSAF_CHLRE1.386e-4054.09Photosystem I reaction center subunit III, chlorop... [more]
PSAF_CYAPA4.460e-3950.65Photosystem I reaction center subunit III OS=Cyano... [more]
PSAF_GRATL1.695e-3850.64Photosystem I reaction center subunit III OS=Graci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664987 ID=EY664987; Name=EY664987; organism=Citrus sinensis; type=EST; length=837bp
TGCTCTTCTTCCGCTGGTTCTGAAGATACTTCCTCTTCTTCTGGCAAGGC
CGCCAAGCCGCTCCAGGCTTTCTCAGCAGCCCTTGCACTTTCCTCAATTC
TGCTATCAGCCCCACAGCTCGCAGTTGCCGACATCAGCGGCCTCACCCCA
TGCAAAGAGTCCAAACAATTCGCCAAGCGCGAGAAGCAGCAGCTCAAGAA
GCTCGAGTCTTCACTAAAACTGTACGCTCCCGACAGCGCCCCGGCTCTCG
CAATCAAAGCCACCATGGAGAAGACGAAACGGCGGTTTGACAACTACGGG
AAGTACGGGTTGCTGTGCGGGTCAGATGGGTTGCCGCATCTGATTGTGAG
CGGTGACCAGAGGCACTGGGGTGAGTTTATCACTCCGGGGTTGTTGTTTT
TGTACATAGCTGGATGGATCGGGTGGGTTGGCAGGAGCTACTTGATCGCC
ATTAGCGGTGAAAAGAAGCCGGCCATGAAGGAGATCATCATTGATGTTCC
TTTGGCTTCCAGGTTGGTCTTCAGAGGTTTTAGCTGGCCTGTTGCTGCTT
ACAGAGAGTTCGTTAATGGTGAACTTGTTGTCAAGGACGTTTAATCATTC
TATCTATTTCTATCTCCTCTGGAGTGGGACTCTACAGAGCATGGGGCTGA
CAGAAAGGGATGAAATATGAAAGCTGGATGCCTGGATTTCTGGGAATTGG
NTGAGGAATGGGGAGAGGGNAATNNTATGTGTCTAAAGTTTGTGAATTTG
ATTTTGGTGATTGATACTGATCCTGATCCTGATCAATCAAACTCAATNCT
CGTTTGCTCCCCAAAAAAAAAAAAAAAAAAAAAGCCG
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