EY664946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY664946 vs. ExPASy Swiss-Prot
Match: SAP18_ARATH (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana GN=At2g45640 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 8.094e-50 Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 2 Query: 143 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPDKNGRFMVREVGKTFSYEGRRQLDDGKMLAELGFEIGDYLDVAI 505 EPVDREKTCPLLLRVFTK GGHH+ ED+AVRGKEPKDEVQIYTWKDA+LRELTDLVKEV+ AARRR+ARLSFAFVYP+ G + VREVG+T +Y R+Q DD K L+EL FEIGDYLDVAI Sbjct: 31 EPVDREKTCPLLLRVFTKSGGHHTSEDYAVRGKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVGETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151
BLAST of EY664946 vs. ExPASy Swiss-Prot
Match: SAP18_PONAB (Histone deacetylase complex subunit SAP18 OS=Pongo abelii GN=SAP18 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.707e-29 Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 143 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPD-KNGRFMVREVGKTFSYEGRRQLDDGKMLAELGFEIGDYLDVAI 505 +P+DREKTCPLLLRVFT G H R D RG P E+QIYTW DATL+ELT LVKEV P AR++ +FA V+ D K + V+E+G T S GR+ DD L F+IGDYLD+AI Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS--GRKGTDDSMTLQSQKFQIGDYLDIAI 137
BLAST of EY664946 vs. ExPASy Swiss-Prot
Match: SAP18_HUMAN (Histone deacetylase complex subunit SAP18 OS=Homo sapiens GN=SAP18 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.707e-29 Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 143 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPD-KNGRFMVREVGKTFSYEGRRQLDDGKMLAELGFEIGDYLDVAI 505 +P+DREKTCPLLLRVFT G H R D RG P E+QIYTW DATL+ELT LVKEV P AR++ +FA V+ D K + V+E+G T S GR+ DD L F+IGDYLD+AI Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS--GRKGTDDSMTLQSQKFQIGDYLDIAI 137
BLAST of EY664946 vs. ExPASy Swiss-Prot
Match: SAP18_BOVIN (Histone deacetylase complex subunit SAP18 OS=Bos taurus GN=SAP18 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.707e-29 Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 143 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPD-KNGRFMVREVGKTFSYEGRRQLDDGKMLAELGFEIGDYLDVAI 505 +P+DREKTCPLLLRVFT G H R D RG P E+QIYTW DATL+ELT LVKEV P AR++ +FA V+ D K + V+E+G T S GR+ DD L F+IGDYLD+AI Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMS--GRKGTDDSMTLQSQKFQIGDYLDIAI 137
BLAST of EY664946 vs. ExPASy Swiss-Prot
Match: SAP18_MOUSE (Histone deacetylase complex subunit SAP18 OS=Mus musculus GN=Sap18 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.535e-29 Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 143 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPD-KNGRFMVREVGKTFSYEGRRQLDDGKMLAELGFEIGDYLDVAI 505 +P+DREKTCPLLLRVFT G H R D RG P E+QIYTW DATL+ELT LVKEV P AR++ +FA V+ D K + V+E+G T S GR+ DD L F+IGDYLD+AI Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMS--GRKGTDDSMTLQSQKFQIGDYLDIAI 137
BLAST of EY664946 vs. ExPASy Swiss-Prot
Match: SAP18_DROME (Histone deacetylase complex subunit SAP18 OS=Drosophila melanogaster GN=Bin1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.801e-26 Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 2 Query: 149 VDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPD-KNGRFMVREVGKTFSYEGRRQLDDGKMLAELGFEIGDYLDVAI 505 +DREKTCP+LLRVF G HHS ++ G P +E+QIYTW+DATL ELT LV++V P R++ FA VYP+ ++ F +RE+G T + G++ +DD K LA+ F IGD+LD++I Sbjct: 18 IDREKTCPMLLRVFCSTGRHHSVSEYMF-GNVPTNELQIYTWQDATLHELTSLVRDVNPDTRKKGTYFDFAVVYPNFRSNHFQMREIGVTCT--GQKGIDDNKTLAQAKFSIGDFLDISI 134
BLAST of EY664946 vs. ExPASy Swiss-Prot
Match: SAP18_CAEEL (Probable histone deacetylase complex subunit SAP18 OS=Caenorhabditis elegans GN=C16C10.4 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.963e-24 Identity = 57/124 (45.97%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 143 EPVDREKTCPLLLRVFTKIGGHHSREDFAVR--GKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPDKNG-RFMVREVGKTFSYEGRRQLDDGKMLAELGFEIGDYLDVAI 505 +P+DREK CP+LLRVF H+ ++ R G P E+Q++TW D +LRELT L+KEV P ARR+ FA V D+ R+++R+VG T + G R +DD K L + FE+GD++DVAI Sbjct: 16 KPLDREKVCPMLLRVFVANNRHNPMSEYNSRNGGSVPPSELQMHTWMDCSLRELTSLIKEVNPDARRKGTTFDFAIVQADRGSPRYILRDVGNTTN--GERGIDDNKTLQQCKFEVGDFVDVAI 137 The following BLAST results are available for this feature:
BLAST of EY664946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664946 ID=EY664946; Name=EY664946; organism=Citrus sinensis; type=EST; length=759bpback to top |