EY664944
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 5.376e-81 Identity = 138/189 (73.02%), Postives = 155/189 (82.01%), Query Frame = 3 Query: 102 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQEYFTDTTTLFIVEMIFIGWADGIRWADIIKPGCVNTDPIFPIISSPAPMLVTQVGLWFDPLGWGS 668 QK+ S+ GATKASF A G+RSV+VSA AADP+RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE+L+WN Q+E+VH RWAMLGAAGIFIPE LTK+G+LNTPSWYTAGEQEYFTDTTTLF++E++ IGWA+G RWADIIKPGCVNTDPIFP + GLWFDPLGWGS Sbjct: 21 QKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGS 209 HSP 2 Score: 80.1073 bits (196), Expect = 1.948e-14 Identity = 41/61 (67.21%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 634 WGFGLTHLAGDPXSPEMVKELRTKEIKNGRLPMLAGMGAWXQHIYTGTGPIXHLIAXLADP 816 WG G SP +KELRTKEIKNGRL MLA MGAW QHIYTGTGPI +L A LADP Sbjct: 207 WGSG---------SPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 2.114e-77 Identity = 134/189 (70.90%), Postives = 148/189 (78.31%), Query Frame = 3 Query: 102 QKSRSVAGATKASFXXXXXXXXXXXXATAGTRSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQEYFTDTTTLFIVEMIFIGWADGIRWADIIKPGCVNTDPIFPIISSPAPMLVTQVGLWFDPLGWGS 668 +++ S+ G TKASF T RS + AADP+RPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPE+LRWN Q+E+VHCRWAMLGAAGIFIPELLTK+GILNTPSWYTAGEQEYFTDTTTLFIVE++ IGWA+G RWADIIKPGCVNTDPIFP + GLWFDPLGWGS Sbjct: 21 RRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGS 209 HSP 2 Score: 80.1073 bits (196), Expect = 1.948e-14 Identity = 41/61 (67.21%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 634 WGFGLTHLAGDPXSPEMVKELRTKEIKNGRLPMLAGMGAWXQHIYTGTGPIXHLIAXLADP 816 WG G SP +KELRTKEIKNGRL MLA MGAW QHIYTGTGPI +L A LADP Sbjct: 207 WGSG---------SPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 9.661e-45 Identity = 74/140 (52.86%), Postives = 95/140 (67.86%), Query Frame = 3 Query: 243 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQEYFTDTTTLFIVEMIFIGWADGIRWADIIKPGCVNTDPIFPIISSPAPMLVTQVGLWFDPLGW 662 W PG P +L GSLPGD GFDPLGL DPE LRW VQ+E+V+ RWAMLG AG+ +PE+ T +GI+N P WY AG++EYF ++TLF++E I + + RW DI PG VN DPIF S PA + G+ F+PL + Sbjct: 56 WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGI-FNPLNF 194 HSP 2 Score: 43.8986 bits (102), Expect = 9.661e-45 Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 1 Query: 691 ELRTKEIKNGRLPMLAGMGAWXQHIYTGTGPIXHLIAXLADP 816 E + KEI NGRL MLA +G QH TG GP +L+ ++DP Sbjct: 199 EAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDP 240
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.793e-37 Identity = 73/155 (47.10%), Postives = 100/155 (64.52%), Query Frame = 3 Query: 198 SVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQEYFTDTTTLFIVEMIFIGWADGIRWADIIKPGCVNTDPIFPIISSPAPMLVTQVGLWFDPLGW 662 S S+ + + W PG P++L GSL GD GFDPLGL DPE L+W VQ+E+V+ RWAMLG AG+ +PE+ TK+GI+N P WY AG+++YF ++TLF++E I + + RW DI PG VN DPIF S P + G+ F+PL + Sbjct: 42 SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNF 195
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.511e-35 Identity = 73/157 (46.50%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 195 RSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWY-TAGEQEYFTDTTTLFIVEMIFIGWADGIRWADIIKPGCVNTDPIFPIISSPAPMLVTQVGLWFDPLGW 662 R V+V A + W PG P +LDGSL GD GFDPL L DPE LRW VQ+++V+ RWAMLG AG+ IPE+LTK G++N P W G++ YF ++T V M + + RW DI PG VN DPIF S P P G F+PL + Sbjct: 26 RDVAVQAKGS------WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQDPIFKSYSLP-PHECGYPGRVFNPLNF 174 HSP 2 Score: 40.0466 bits (92), Expect = 1.511e-35 Identity = 21/42 (50.00%), Postives = 25/42 (59.52%), Query Frame = 1 Query: 691 ELRTKEIKNGRLPMLAGMGAWXQHIYTGTGPIXHLIAXLADP 816 E + KE+ NGRL MLA +G QH G GP +L LADP Sbjct: 178 ENKEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADP 219
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.627e-31 Identity = 71/185 (38.38%), Postives = 97/185 (52.43%), Query Frame = 3 Query: 192 TRSVSVSAAAADP------NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGEQEYFTDTTTLFIVEMIFIGWADGIRWADIIKPGC------VNTDPIFPIISSPAPMLVTQVGLWFDPLGWG 665 +R V AAA P +RPLWF +LDGSLPGD+GFDPLGL SDPE RW E+++ R+AMLGA G PE L K+G++ +W+ AG Y+ D TLF++EM +G+A+ R+ D KPG + + F +PA G +F+PLG+G Sbjct: 35 SRKGLVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPA----YPGGPFFNPLGFG 214 HSP 2 Score: 51.2174 bits (121), Expect = 7.627e-31 Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 685 VKELRTKEIKNGRLPMLAGMGAWXQHIYTGTGPIXHLIAXLADPV 819 +KEL+ KE+KNGRL MLA +G + Q + TG GP +L+ +ADPV Sbjct: 220 LKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPV 264
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.931e-31 Identity = 67/186 (36.02%), Postives = 91/186 (48.92%), Query Frame = 3 Query: 195 RSVSVSAAAADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGEQEYFTDTTTLFIVEMIFIGWADGIRWADIIKPGCV--------------NTDPIFPIISSPAPMLVTQVGLWFDPLGWG 665 R+ S NR LWF +LDG LPGDFGFDPLGL SDPE +W E+++ R+AMLGAAG PE+L K G++ +W+ AG Y+ D TLF++EM +G+A+ R+ D KPG + + DP +P G F+PLG+G Sbjct: 40 RAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYP------------GGPLFNPLGFG 212 HSP 2 Score: 52.7582 bits (125), Expect = 9.931e-31 Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 685 VKELRTKEIKNGRLPMLAGMGAWXQHIYTGTGPIXHLIAXLADPV 819 +KEL+ KEIKNGRL MLA +G + Q + TG GP +L+ LADPV Sbjct: 218 MKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPV 262
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.805e-26 Identity = 62/180 (34.44%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 186 AGTRSVSVSAAAAD---PNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQ-------EYFTDTT--------TLFIVEMIFIGWADGIRWADIIKPGCVNTDPIFPIISSPAPMLVTQVGLWFDPLG 659 A T+ ++ SA+ + P+R L+ F G PP +L G PGD+G+D GL +DPE N + E++HCRWAMLGA G PELL + G+ W+ AG Q +Y + + ++ ++I +G +G R A P TDPI+P G FDPLG Sbjct: 44 ATTKKLTASASTSPWYGPDRVLYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG--GPLGEVTDPIYP-------------GGSFDPLG 207 HSP 2 Score: 52.373 bits (124), Expect = 3.805e-26 Identity = 27/48 (56.25%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 676 PEMVKELRTKEIKNGRLPMLAGMGAWXQHIYTGTGPIXHLIAXLADPV 819 PE EL+ KEIKNGRL M + G + Q I TG GPI +L LADPV Sbjct: 212 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.082e-25 Identity = 55/165 (33.33%), Postives = 80/165 (48.48%), Query Frame = 3 Query: 195 RSVSVSAAAADPNRPLW---FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWADGIRWADIIKPGCVNTDPIFPIISSPAPMLVTQVGLWFDPLG 659 + VS S+ PNR + F G +P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ G Q + + +L + I WA + ++ V +P+ ++ P G FDPLG Sbjct: 43 KPVSSSSPWYGPNRVKYLGPFSGESP-SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYP------GGSFDPLG 200 HSP 2 Score: 51.6026 bits (122), Expect = 4.082e-25 Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 676 PEMVKELRTKEIKNGRLPMLAGMGAWXQHIYTGTGPIXHLIAXLADPV 819 PE EL+ KEIKNGRL M + G + Q I TG GP+ +L LADPV Sbjct: 205 PEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
BLAST of EY664944 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.524e-24 Identity = 54/167 (32.34%), Postives = 79/167 (47.31%), Query Frame = 3 Query: 186 AGTRSVSVSAAAADPNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWADGIRWADIIKPGCVNTDPIFPIISSPAPMLVTQVGLWFDPLG 659 A + VS S+ +R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + + WA + ++ + P+ I+ P G FDPLG Sbjct: 39 AKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYP------GGSFDPLG 199 HSP 2 Score: 48.9062 bits (115), Expect = 1.524e-24 Identity = 24/48 (50.00%), Postives = 30/48 (62.50%), Query Frame = 1 Query: 676 PEMVKELRTKEIKNGRLPMLAGMGAWXQHIYTGTGPIXHLIAXLADPV 819 P+ EL+ KEIKNGRL M + G + Q I TG GP+ L +ADPV Sbjct: 204 PQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPV 251 The following BLAST results are available for this feature:
BLAST of EY664944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664944 ID=EY664944; Name=EY664944; organism=Citrus sinensis; type=EST; length=914bpback to top |