EY664936

Overview
NameEY664936
Unique NameEY664936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1557 contig Csv1_Contig1557:37..982. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664936 vs. ExPASy Swiss-Prot
Match: SYP51_ARATH (Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 4.031e-87
Identity = 161/232 (69.40%), Postives = 193/232 (83.19%), Query Frame = 1
Query:  175 MASASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLXILNKRTKGGCTCMCMXXXXXXXXXXXXXXYMXIKY 870
            MAS+SDSW++ YNEA+KL+++INGMISERSS   +GP++QR ASAIRRKITI G +LDSLQSLL+++ GK PISEKEMNRRKDM+ NLRSK NQMA+ LNMSNFANRDSLLGP+IK  D M+R TG+DNQG+VG+QRQ+MREQDEGLE+LE TV+STKHIALAV+EELDL TRLIDDLD HVDVTDSRLRRVQK+L ++NK  + GC+CM M              +M +KY
Sbjct:    1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSLQSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQKSLAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLVKY 231          
BLAST of EY664936 vs. ExPASy Swiss-Prot
Match: SYP52_ARATH (Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 8.981e-87
Identity = 159/232 (68.53%), Postives = 191/232 (82.33%), Query Frame = 1
Query:  175 MASASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLXILNKRTKGGCTCMCMXXXXXXXXXXXXXXYMXIKY 870
            MAS+SD W++EYNEA+KL++DINGM+SER++   +GP++QR ASAIRRKITILGTRLDSLQSLL K+PGKQ +SEKEMNRRKDM+ NLRSK NQ+AS LNMSNFANRDSL G ++K  D +NR +G+DNQG+V FQRQ+MREQDEGLEKLEETV+STKHIALAVNEEL L TRLIDDLD  VD+TDSRLRRVQK+L ++NK  K GC+CM M              ++ +KY
Sbjct:    1 MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSLQSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLRRVQKSLALMNKSMKSGCSCMSMLLSVLGIVGLALVIWLLVKY 232          
BLAST of EY664936 vs. ExPASy Swiss-Prot
Match: STX8B_DICDI (Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.157e-17
Identity = 64/222 (28.83%), Postives = 111/222 (50.00%), Query Frame = 1
Query:  190 DSWIKEYNEAIKLADDINGMISERSSMPASGPES-QRHASA-IRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLN--MSNFANRDSLLGPEIK-SADVMNRATG----------LDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLXILNKRTKGGCTCMCM 810
            D W+ E++  +KL + +   I E S    + P   Q++  A +R  +  +   +  LQ  L+     + I EKE+ RRK+ + +L S  NQ+ STL+  ++N + ++ L+G          NR  G           DNQ L   Q+ IMREQDE L+ L ++++  K++A A++ ELD H  ++DD++   D    RLR   + +  + +     C  +C+
Sbjct:    3 DYWLNEHDNIVKLINSLTADIKEYSIQQRNNPGIVQKNTPAKLRNGLVHITNEILRLQDSLT-YGNNRNIQEKELLRRKNKVESLISMKNQLNSTLDAAINNTSQKNELMGNNNGVGIGYSNRQFGKPKETEATKQFDNQQLFTNQQHIMREQDESLDLLSQSIMRQKNMAHAMSNELDQHNEMLDDVEIGTDAVSMRLRNANRRMETIKQNAGSTCMIVCI 223          
BLAST of EY664936 vs. ExPASy Swiss-Prot
Match: STX8_RAT (Syntaxin-8 OS=Rattus norvegicus GN=Stx8 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.950e-13
Identity = 54/215 (25.12%), Postives = 102/215 (47.44%), Query Frame = 1
Query:  184 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLXILNKRT 783
            A D W   Y+   ++A +I   I ER+     G ++ +    IR  +  L  ++D L+ LL +    + I++ E +RR+++L +L ++       L +++F N        R SL+  E K         +      GL    +   Q++I++EQD GL+ L   +   K +   +  ELD    +IDDL   V+ TD +LR   + + ++++++
Sbjct:    2 APDPWFSTYDSTCQIAQEIAEKIQERNQCERRGEKTPKLTLTIRTLLKNLKVKIDLLKDLLLRAVSTRQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGSEPDLIRSSLMSEEAKRGTPNPWLCEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTEARRVTLVDRKS 211          
BLAST of EY664936 vs. ExPASy Swiss-Prot
Match: STX8_MOUSE (Syntaxin-8 OS=Mus musculus GN=Stx8 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.950e-13
Identity = 54/215 (25.12%), Postives = 102/215 (47.44%), Query Frame = 1
Query:  184 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLXILNKRT 783
            A D W   Y+   ++A +I   I ER+     G ++ +    IR  +  L  ++D L+ LL +    + I++ E +RR+++L +L ++       L +++F N        R SL+  E K         +      GL    +   Q++I++EQD GL+ L   +   K +   +  ELD    +IDDL   V+ TD +LR   + + ++++++
Sbjct:    2 APDPWFSTYDSTCQIAQEIAEKIQERNQCERRGEKTPKLTLTIRTLLKNLKVKIDLLKDLLLRAVSTRQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGAEPDLIRSSLMSEEAKRGTPNPWLCEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTEARRVTLVDRKS 211          
BLAST of EY664936 vs. ExPASy Swiss-Prot
Match: STX8_HUMAN (Syntaxin-8 OS=Homo sapiens GN=STX8 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.266e-12
Identity = 52/215 (24.19%), Postives = 100/215 (46.51%), Query Frame = 1
Query:  184 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLXILNKRT 783
            A D W   Y+   ++A +I   I +R+     G ++ +    IR  +  L  ++  L+ LL +      I++ E +RR+++L +L ++       L +++F N        R SL+  E K         +      GL    +   Q++I++EQD GL+ L   +   K +   +  ELD    +IDDL   V+ TD +LR   + + ++++++
Sbjct:    2 APDPWFSTYDSTCQIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRVNMVDRKS 211          
BLAST of EY664936 vs. ExPASy Swiss-Prot
Match: STX8_BOVIN (Syntaxin-8 OS=Bos taurus GN=STX8 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.034e-11
Identity = 52/217 (23.96%), Postives = 103/217 (47.47%), Query Frame = 1
Query:  184 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRAT--GLDNQGLV---------GF------QRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLXILNKRT 783
            A D W   Y+   ++A +I   I +R+    +G  + +    IR  +  L  ++  L+ LL +      I++ E +RR+++L +L ++       L +++F N  +   P++  + +M      G  N  L+         GF      Q++I++EQD GL+ L   +   K +   +  ELD    +IDDL   V+ TD +LR   + + ++++++
Sbjct:    2 APDPWFSTYDSTCQIAQEIAEKIQQRNQYERNGENTTKLTVTIRALLQKLKEKIALLKDLLLRAVATHQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGA--EPDLIRSSLMTGGAKRGAPNPWLLEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRTETRRVNLVDRKS 211          
The following BLAST results are available for this feature:
BLAST of EY664936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SYP51_ARATH4.031e-8769.40Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 ... [more]
SYP52_ARATH8.981e-8768.53Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 ... [more]
STX8B_DICDI1.157e-1728.83Probable syntaxin-8B OS=Dictyostelium discoideum G... [more]
STX8_RAT2.950e-1325.12Syntaxin-8 OS=Rattus norvegicus GN=Stx8 PE=1 SV=1[more]
STX8_MOUSE2.950e-1325.12Syntaxin-8 OS=Mus musculus GN=Stx8 PE=2 SV=1[more]
STX8_HUMAN7.266e-1224.19Syntaxin-8 OS=Homo sapiens GN=STX8 PE=1 SV=2[more]
STX8_BOVIN8.034e-1123.96Syntaxin-8 OS=Bos taurus GN=STX8 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664936 ID=EY664936; Name=EY664936; organism=Citrus sinensis; type=EST; length=946bp
TCCGGTNCCGGNAATTCCCGGCCTCGACCCACGCGTCCGGTACAAATTCG
GCAGTGTTGACGCTAATTCCCGCCTTTTAGCTCGTTAATGCGACTTAGCT
TTGCTCCATCCTAAACTTCTCCAATCCAATCCCTCTCTCAGTCTAGAATC
CGAAATCTACCCATAATCTGTTCAATGGCTTCTGCTTCAGACTCGTGGAT
AAAGGAATACAATGAAGCAATAAAACTGGCAGATGATATTAATGGCATGA
TATCAGAACGAAGTTCGATGCCCGCATCTGGACCTGAATCCCAGCGTCAT
GCATCTGCCATACGGAGGAAGATTACCATATTAGGAACCAGATTGGATAG
CTTGCAGTCCCTTTTATCTAAGCTTCCCGGGAAGCAGCCCATTTCGGAGA
AAGAGATGAATCGTCGGAAGGACATGCTTGCTAATTTGAGATCCAAAGTG
AATCAAATGGCTTCCACGTTGAACATGTCAAACTTTGCTAATAGGGATAG
CCTGCTTGGACCAGAGATAAAGTCAGCCGATGTCATGAACCGAGCAACTG
GCTTGGACAATCAGGGCCTTGTTGGTTTTCAACGACAAATTATGAGAGAG
CAAGATGAAGGGCTTGAGAAACTGGAGGAGACAGTAGTCAGTACAAAGCA
TATTGCATTGGCAGTCAATGAAGAACTTGACCTGCACACTAGACTTATTG
ATGACTTGGACCAGCATGTGGATGTTACAGATTCTCGCCTACGGCGAGTG
CAGAAGAACCTGGNCATTTTGAATAAGCGCACAAAGGGTGGTTGCACGTG
TATGTGCATGCTTTTAGCTGTTATCGGAATCGTTGTTCTGGGTGTGGTCA
TATATATGTNGATCAAATACTNGTAAAAACTCACATGGTGAAATGCACTG
TTTNCCCCNTGCTGTCTGTCTTTTGGTGTGCTGGCTGGGNTCGCTC
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