EY664931

Overview
NameEY664931
Unique NameEY664931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5994 contig Csv1_Contig5994:206..972. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.385e-51
Identity = 99/139 (71.22%), Postives = 112/139 (80.58%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL  ELM LMM GG  G+SAFPE ++IF W GTI G K T++EG  Y+LSL F  DYPFKPP+VKFET CFHPNVD YGNICLDIL DKWSSAYD RTILLSIQSLLGEPN  SPLN+ AA L +N+E+YRKMV+K Y
Sbjct:   38 KRLQSELMGLMMGGGP-GISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 175
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.332e-50
Identity = 98/139 (70.50%), Postives = 111/139 (79.86%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL  ELM LMM G D G+SAFPE ++IF W GTI G K T++EG  Y+LSL F  DYPFK P+VKFET CFHPNVD YGNICLDIL DKWSSAYD RTILLSIQSLLGEPN  SPLN+ AA L +N+E+YRKMV+K Y
Sbjct:   39 KRLQSELMGLMM-GADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLY 176
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.270e-50
Identity = 90/139 (64.75%), Postives = 116/139 (83.45%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL  ELM+LMM G   G+SAFP+G++IF WIGTI+G K T+YE + +K+SL+FP DYP+KPP VKFET CFHPNVD  GNICLDIL DKWS  Y+ R++L+SIQSLLGEPN ESPLNSYAA+L +N+++Y+K++ K+Y
Sbjct:    9 KRLQSELMNLMM-GPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQDEYKKVLDKRY 146
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.320e-47
Identity = 92/139 (66.19%), Postives = 108/139 (77.70%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL  ELM+LMMSG D G+SAFPE +++F WIGTI+G  GT+YE L YKLSL FP  YP+  P VKF T CFHPNVD +GNICLDIL DKWS+ YD RTILLS+QSLLGEPN ESPLN YAA L  N+  Y+K + +QY
Sbjct:   33 KRLQQELMTLMMSG-DKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTAYKKHLHEQY 170
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.596e-45
Identity = 88/139 (63.31%), Postives = 106/139 (76.26%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL  ELM+LMMSG D G+SAFPE +++F W+GTI G  GT+YE L YKLSL FP  YP+  P VKF T C+HPNVD  GNICLDIL DKWS+ YD RTILLSIQSLLGEPN +SPLN++AA L  N   ++K +Q+ Y
Sbjct:   33 KRLQQELMTLMMSG-DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.596e-45
Identity = 88/139 (63.31%), Postives = 106/139 (76.26%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL  ELM+LMMSG D G+SAFPE +++F W+GTI G  GT+YE L YKLSL FP  YP+  P VKF T C+HPNVD  GNICLDIL DKWS+ YD RTILLSIQSLLGEPN +SPLN++AA L  N   ++K +Q+ Y
Sbjct:   33 KRLQQELMTLMMSG-DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.046e-44
Identity = 87/139 (62.59%), Postives = 106/139 (76.26%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL  ELM+LMMSG D G+SAFPE +++F W+GTI G  GT+YE L YKLSL FP  YP+  P VKF T C+HPNVD  GNICLDIL +KWS+ YD RTILLSIQSLLGEPN +SPLN++AA L  N   ++K +Q+ Y
Sbjct:   33 KRLQQELMTLMMSG-DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.784e-44
Identity = 81/139 (58.27%), Postives = 112/139 (80.58%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL  EL +L+MSG D G++AFP+G+++F W+ T++G K T+YE L YKL+L FP DYP+KPP VKF T C+HPNVDQ GNICLDIL + W+++YD RTILLS+QSLLGEPN  SPLN+ AA + +N+ +Y+K++ ++Y
Sbjct:   33 KRLQQELRTLLMSG-DPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMWSNQTEYKKVLHEKY 170
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.975e-44
Identity = 87/139 (62.59%), Postives = 104/139 (74.82%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL  ELM LM SG D G+SAFPE +++F W+GTI G  GT+YE L YKLSL FP  YP+  P VKF T C+HPNVD  GNICLDIL DKWS+ YD RTILLSIQSLLGEPN +SPLN++AA L  N   ++K +Q+ Y
Sbjct:   33 KRLQQELMILMTSG-DKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170
[Close]
BLAST of EY664931 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.740e-43
Identity = 84/139 (60.43%), Postives = 107/139 (76.98%), Query Frame = 1 
Query:    1 QRLY*ELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLRFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILHDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 417
            +RL+ ELM+LMM+  + G+SAFP+GE+IF W+GTI G + T+Y G +Y+LSL FP  YP+  P VKF T CFHPNVD  G ICLDIL DKWS+ YD RTILLSIQSLLGEPN ESPLN+ AA + N++++Y+K +   Y
Sbjct:   35 KRLHKELMNLMMAN-ERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQKEYKKYLDAFY 172
The following BLAST results are available for this feature:
BLAST of EY664931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
UBC20_ARATH4.385e-5171.22Ubiquitin carrier protein E2 20 OS=Arabidopsis tha... [more]
UBC19_ARATH6.332e-5070.50Ubiquitin carrier protein E2 19 OS=Arabidopsis tha... [more]
UBE2C_DICDI8.270e-5064.75Probable ubiquitin-conjugating enzyme E2 C OS=Dict... [more]
UBE2C_XENLA1.320e-4766.19Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevi... [more]
UBE2C_MACFA3.596e-4563.31Ubiquitin-conjugating enzyme E2 C OS=Macaca fascic... [more]
UBE2C_BOVIN3.596e-4563.31Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN... [more]
UBE2C_HUMAN1.046e-4462.59Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens ... [more]
UBE2C_SPISO1.784e-4458.27Ubiquitin-conjugating enzyme E2 C OS=Spisula solid... [more]
UBE2C_MOUSE3.975e-4462.59Ubiquitin-conjugating enzyme E2 C OS=Mus musculus ... [more]
UBE2C_DROME5.740e-4360.43Ubiquitin-conjugating enzyme E2 C OS=Drosophila me... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664931 ID=EY664931; Name=EY664931; organism=Citrus sinensis; type=EST; length=767bp
CAAAGGCTTTATTAAGAATTGATGTCTCTTATGATGAGTGGAGGTGATCT
TGGGGTCTCGGCCTTTCCTGAAGGCGAGAGCATTTTCACTTGGATTGGCA
CAATCGAGGGTGGAAAGGGAACTATGTATGAGGGTTTATCATACAAACTT
TCTTTGCGTTTTCCTCTGGATTATCCTTTCAAGCCACCCCAAGTCAAGTT
TGAAACTATGTGCTTCCATCCAAATGTTGATCAGTATGGCAACATATGCC
TAGACATCCTTCATGACAAGTGGTCTTCAGCGTATGATTGCAGAACGATT
CTTTTGTCCATTCAAAGTTTACTGGGAGAGCCTAATCCAGAGAGCCCTCT
CAACAGCTATGCTGCAGCTCTGTTGAACAATAAGGAAGATTACAGAAAAA
TGGTCCAGAAACAGTACTTTGCTGGAGAATTTGAGAGCTAATTTGAACAG
CAAAACAGATACAAAATCGGATGTTAGGCTTCCACATTATTTCTCTGTAA
AGCTCAAGGGGAAGGGCTTGTTTCAGTTTGGAACTTGTTTCAATGAAAAC
TGATCTACATAAGTCTCATCATTGTCAGTACAGNTATTTACATTATACCC
AAAGGAATGGTACTCANGCTCTCGATAATTTCTCATTGTATAGCAAAAAT
AAAGTTACACCGTGTTGTAATTTTGTTTNGATCAAATGAAAGGNACTNCT
TTCTCATATGCAATTGGAGTGATACACTTCTGTTGGNTCNTATAAAAAAA
TNNAANATAAATAAAAA
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