EY664927

Overview
NameEY664927
Unique NameEY664927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY664927_ssr396 microsatellite EY664927_ssr396:396..407. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8839 contig Csv1_Contig8839:222..912. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP2_TOBAC (Luminal-binding protein 2 (Fragment) OS=Nicotiana tabacum GN=BIP2 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.330e-53
Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 386
            KGRL Q ++ERMVREAEEFAEEDKKVKE+IDARNSLETYVYNMKNQIND   LADKLESDEK+KIETA KEALEWLDDN SAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG G+
Sbjct:  163 KGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGS 279
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.737e-53
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 386
            KGRL Q ++ERMVREAEEFAEEDKKVKE+IDARNSLETYVYNMKNQIND   LADKLESDEK+KIETA KEALEWLDDN SAEKEDYEEKLKEVEA+CNPIITAVYQRSGGAPG G+
Sbjct:  163 KGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQRSGGAPGGGS 279
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.871e-53
Identity = 103/116 (88.79%), Postives = 108/116 (93.10%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 383
            KGRL Q ++ERMVREAEEFAEEDKKVKEKIDARN+LETYVYNMKNQIND   LADKLESDEK+KIETA KEALEWLDDN SAEKEDY+EKLKEVEAVCNPIITAVYQRSGGAPG G
Sbjct:  539 KGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPGGG 654
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.921e-52
Identity = 101/118 (85.59%), Postives = 109/118 (92.37%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 389
            KGRL Q ++ERMV+EAEEFAEEDKKVKE+IDARNSLETYVYNM+NQIND   LADKLESDEK+KIETA KEALEWLDDN SAEKEDY+EKLKEVEAVCNPIITAVYQRSGGAPG  +E
Sbjct:  539 KGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPGGASE 656
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.589e-52
Identity = 102/117 (87.18%), Postives = 107/117 (91.45%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 386
            KGRL Q ++ERMVREAEEFAEEDKKVKE+IDARN LETYVYNMKNQIND   LADKLESDEK+KIETAVKEALEWLDDN SAEKEDYEEKLKEVEAVCNPIITAVYQRSGGA G  +
Sbjct:   42 KGRLSQEEIERMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGASGGSS 158
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP8_TOBAC (Luminal-binding protein 8 (Fragment) OS=Nicotiana tabacum GN=BIP8 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.534e-52
Identity = 100/114 (87.72%), Postives = 107/114 (93.86%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL Q ++ERMV+EAEEFAEEDKKVKE+IDARNSLETYVYNM+NQIND   LADKLESDEK+KIETA KEALEWLDDN SAEKEDYEEKLKEVEAVCNPIITAVYQ+SGGAPG
Sbjct:  166 KGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQKSGGAPG 279
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.534e-52
Identity = 100/114 (87.72%), Postives = 107/114 (93.86%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL Q ++ERMV+EAEEFAEEDKKVKE+IDARNSLETYVYNM+NQIND   LADKLESDEK+KIETA KEALEWLDDN SAEKEDYEEKLKEVEAVCNPIITAVYQ+SGGAPG
Sbjct:  540 KGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQKSGGAPG 653
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.231e-50
Identity = 99/114 (86.84%), Postives = 105/114 (92.11%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 377
            KGRL Q ++ERMVREAEEFAEEDKKVKEKIDARNSLETY+YNMKNQI+D   LADKLESDEK+KIE AVKEALEWLDDN SAEKEDY+EKLKEVEAVCNPIITAVYQRSGG  G
Sbjct:  539 KGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNSLETYIYNMKNQISDADKLADKLESDEKEKIEGAVKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGPSG 652
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 6.832e-50
Identity = 95/118 (80.51%), Postives = 108/118 (91.53%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 389
            KGRL Q +++RMV+EAEEFAEEDKKVKEKIDARN+LETYVYNMKNQ++D   LADKLE DEK+KIE A KEALEWLD+N ++EKE+Y+EKLKEVEAVCNPIITAVYQRSGGAPGAG E
Sbjct:  538 KGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGAGGE 655
[Close]
BLAST of EY664927 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.429e-49
Identity = 96/119 (80.67%), Postives = 108/119 (90.76%), Query Frame = 3 
Query:   36 KGRLCQRDLERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDNVFLADKLESDEKDKIETAVKEALEWLDDNHSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP-GAGTE 389
            KGRL Q +++RMV+EAEEFAEEDKKVKEKIDARN+LETYVYNMKNQ+ND   LADKLE DEK+KIE A KEALEWLD+N ++EKE+Y+EKLKEVEAVCNPIITAVYQRSGGAP GAG E
Sbjct:  538 KGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGGAGGE 656
The following BLAST results are available for this feature:
BLAST of EY664927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
BIP2_TOBAC1.330e-5388.89Luminal-binding protein 2 (Fragment) OS=Nicotiana ... [more]
BIP1_TOBAC1.737e-5388.03Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]
BIP_SOLLC3.871e-5388.79Luminal-binding protein OS=Solanum lycopersicum PE... [more]
BIP5_TOBAC1.921e-5285.59Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP3_TOBAC5.589e-5287.18Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
BIP8_TOBAC9.534e-5287.72Luminal-binding protein 8 (Fragment) OS=Nicotiana ... [more]
BIP4_TOBAC9.534e-5287.72Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
BIP_SPIOL5.231e-5086.84Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
BIP2_ARATH6.832e-5080.51Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP1_ARATH4.429e-4980.67Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664927 ID=EY664927; Name=EY664927; organism=Citrus sinensis; type=EST; length=691bp
AATTCACGGCCCGACCCACGCGTCCGCACAAAGCTAAGGGTCGCCTGTGC
CAGAGAGACCTTGAGCGTATGGTTCGTGAGGCTGAAGAATTTGCCGAGGA
GGACAAGAAAGTAAAGGAGAAGATCGATGCTCGCAACAGCCTTGAGACCT
ATGTCTATAACATGAAAAACCAGATTAATGACAATGTTTTTCTTGCCGAC
AAGCTCGAATCTGATGAGAAGGACAAGATTGAAACTGCTGTAAAGGAAGC
CCTTGAATGGCTCGATGACAACCACAGCGCAGAGAAAGAGGACTATGAAG
AGAAGCTCAAGGAGGTTGAAGCCGTTTGCAACCCCATCATCACTGCTGTA
TATCAGAGATCTGGCGGAGCCCCCGGTGCTGGCACTGAATCATCGGATGA
TGATGATTCACACGATGAGCTCTAAAGAATTTTTACTTCGATTGACCATA
TTGCCAAAACTGTCAAGAGGCTAAAATTGAGTAAAATAGGCTTTTTAGAT
TATCTGAGGGTACTTACTGTAATTTTTCTCGTGGTAGGAGAAGTAAAAGG
GAGGCGGAATTTCCCTTTCTTCGCGTGTTTTTTTGGATGTGAAGATACTT
TAAAGGATCTTTTCTTATTTCATTACTAGTGTTTCCTTCAATATTAATGA
AACGTCTCCAAAGTCATTATTATAAAAAAAAAAAAAAAAAA
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