EY664906

Overview
NameEY664906
Unique NameEY664906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9358 contig Csv1_Contig9358:69..972. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664906 vs. ExPASy Swiss-Prot
Match: HDHD3_MOUSE (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus GN=Hdhd3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.270e-14
Identity = 59/204 (28.92%), Postives = 91/204 (44.61%), Query Frame = 2
Query:  236 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG---RPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRXNDVWGAQDAXCDAWL 817
            + L  D   TL+   +P+ + Y      +GV   +  +   +R+AY           ++ G   R +W+ +V  +    G  D+Q      ++LY  +++   W + +  AE   K  RK G+KLAVVSNFD RL  +L  L     FD           KP+P IF +A     V+P  A HVGD    D  G+Q     ++L
Sbjct:    8 RLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRGLTSRQWWKDVVLHTFRLAGVPDAQAMTPVADQLYEDFSSPFTWQVLEG-AEMTLKGCRKRGLKLAVVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRACVEPAVAAHVGDSYLCDYQGSQAVGMHSFL 210          
BLAST of EY664906 vs. ExPASy Swiss-Prot
Match: HDHD3_XENLA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis GN=hdhd3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.577e-14
Identity = 63/203 (31.03%), Postives = 91/203 (44.83%), Query Frame = 2
Query:  251 DAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDG-------RPFWQFIVSSS---TGCSDSQYFE----ELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRXNDVWGAQDAXCDAWL 817
            D   TLL    P+ Q Y    +K G+  +   +   +R AY      SRL + N G       R +W  +V  +   +G  DS   +    +LY  ++T   W L  P A +   +    G+++AV+SNFD RL  +LR    + +FD           KP+  IF KA  L  V P  AVHVGDD  ND   A+     ++L
Sbjct:    9 DVKDTLLRVRVPVGQQYYAEAKKRGLCVNPGTLETSFRNAYRSH---SRL-FPNYGLAQGMSSRQWWLDVVLQTFRLSGIEDSDTVQSLAKQLYQDFSTAHNWALV-PGAREALDSCTNLGLRMAVISNFDRRLEELLRQCCLERYFDFVVTAESAGVAKPHLGIFHKALSLAKVPPHQAVHVGDDYVNDYCAARMVGMHSYL 206          
BLAST of EY664906 vs. ExPASy Swiss-Prot
Match: HDHD3_BOVIN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus GN=HDHD3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 56/204 (27.45%), Postives = 88/204 (43.14%), Query Frame = 2
Query:  236 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRXNDVWGAQDAXCDAWL 817
            + L  D   TLL    P+   Y      +G+      +   +++AY+   Q +    L +      +W  +V  +    G  D+Q      E+LY  +++   W + +  AE   +  RK G+KLAVVSNFD RL  +L  +     FD           KP+P IF +A  L  V+P    H+GD    D  GA+     ++L
Sbjct:    8 RLLTWDVKDTLLRLRHPVGVEYATKARAHGLEVEATALGQAFKQAYKAQSQSFPNYGLGHGLTSHQWWLDLVQQTFHQAGVRDAQAVAPIAEQLYKDFSSPSTWQVLEG-AEATLRGCRKRGLKLAVVSNFDRRLEDILEGVGLREHFDFVLTSEAAGWPKPDPRIFHEALHLAQVEPAVGAHIGDSYQRDYKGARAVGMHSFL 210          
BLAST of EY664906 vs. ExPASy Swiss-Prot
Match: HDHD3_HUMAN (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Homo sapiens GN=HDHD3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.997e-12
Identity = 56/204 (27.45%), Postives = 88/204 (43.14%), Query Frame = 2
Query:  236 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYE---QPWGGSRLRYVNDGRPFWQFIVSSS---TGCSDSQYF----EELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIFLKACDLLGVKPEDAVHVGDDRXNDVWGAQDAXCDAWL 817
            + L  D   TLL    P+ + Y      +G+    + +   +R+AY      +    L +    R +W  +V  +    G  D+Q      E+LY  ++    W + D  AE   +  R  G++LAV+SNFD RL  +L  L     FD           KP+P IF +A  L  ++P  A HVGD+   D  G +     ++L
Sbjct:    8 RLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDG-AEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFL 210          
BLAST of EY664906 vs. ExPASy Swiss-Prot
Match: YFP5_SCHPO (Putative uncharacterized hydrolase C7D4.05 OS=Schizosaccharomyces pombe GN=SPAC7D4.05 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 51/199 (25.63%), Postives = 94/199 (47.24%), Query Frame = 2
Query:  236 KALLVDAAGTLLVPSQPMAQIYREIGEKYGVAYSEAEILNRYRRAYEQPWGGSRLRYVNDGRPFWQFIVSSSTGCS-DSQYFEELYNYYTTEKAWHLCDPEAEKVFKAIRKAGVKLAVVSNFDTRLRPVLRALNCDHWFDXXXXXXXXXXXKPNPTIF----LKACDLLG--VKPEDAVHVGDDRXNDVWGAQDAXCDA 811
            K +  DA GT+L  S+P+  +Y E+ +KYGV  +  EI +   + + +       +   +   +W  ++  S      ++  EEL++Y++ +  + +     + + +   +    + ++SN D R+R VL     DH  D           KP+  IF     KA  LLG  ++PE+ +H+GDD   DV  A++   +A
Sbjct:   11 KLVTFDAFGTILHLSKPVPIVYSEVAQKYGVHATIDEIEHNTFKDFSEKHKNHGKKSGLNPHDWWIKVIEHSFPTPVPAEMAEELWSYFSKKTGYTIHPLLIDFLKRNKEERKYIIGIISNTDERIRTVLEDYGIDHLIDIYAFSYDVGFEKPSREIFDYAMEKAVKLLGQEIQPEECMHLGDDLIKDVSAARNIQWNA 209          
The following BLAST results are available for this feature:
BLAST of EY664906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
HDHD3_MOUSE3.270e-1428.92Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_XENLA5.577e-1431.03Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_BOVIN6.167e-1327.45Haloacid dehalogenase-like hydrolase domain-contai... [more]
HDHD3_HUMAN3.997e-1227.45Haloacid dehalogenase-like hydrolase domain-contai... [more]
YFP5_SCHPO7.538e-1125.63Putative uncharacterized hydrolase C7D4.05 OS=Schi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-071-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664906 ID=EY664906; Name=EY664906; organism=Citrus sinensis; type=EST; length=906bp
ATGAAGTTGAGGAATGGCTCTAATGACAACGACAGTAAGAACCAAACTCC
GTAGACTCATTGCAAGTGCTGGTAATCGCAGCAATGGCTCAATCTCAATC
TCAATCTGCCGCCAGTTATCTTCGGCGACGGAAGCAGCAGAGGCCGTTGG
ATCAAGAGGCGTGGTGGGTTTGGGGGTATTTGGATTGAAAGACTATGAAG
ATTATAGGCGTTCTCTTTATGGAGACATCACACATAAAGCTTTGCTCGTT
GACGCTGCTGGTACTCTCCTTGTTCCTTCTCAGCCCATGGCCCAGATATA
TAGAGAGATTGGAGAGAAGTATGGTGTTGCCTACTCTGAGGCGGAGATAT
TGAACAGATACAGAAGGGCTTATGAGCAGCCATGGGGAGGATCTCGTCTC
AGATATGTGAATGATGGGAGACCCTTCTGGCAATTTATAGTTAGTTCGTC
TACTGGTTGTTCAGATTCCCAGTATTTTGAAGAACTATATAACTACTATA
CCACTGAAAAGGCATGGCACCTCTGTGATCCTGAAGCTGAAAAGGTATTT
AAGGCTATCAGAAAAGCAGGAGTCAAATTGGCTGTTGTGTCAAACTTTGA
TACTCGGTTAAGACCTGTGTTGCGAGCTCTAAATTGTGATCATTGGTTCG
ATGCTGTTGCAGTGTCAGCTGAAGTTGAAGCAGAGAAGCCAAATCCAACA
ATATTCCTAAAAGCTTGTGATTTGTTGGGAGTAAAACCTGAGGATGCTGT
ACATGTAGGGGATGATCGTANGAATGATGTGTGGGGTGCCCAGGATGCAN
GTTGTGATGCTTGGCTTTGGGGAAATGATGTCCACTCCTTTAANGGAGTG
CTCAAGGGATAGGGTCAAANTTAAGAGAAGCCGATCTTACCGACGCTCAA
AGATGC
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